RNA–Protein interactions for RNA: ENST00000511752.5

PTCD2-209, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 3

Gene PTCD2, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-209ENST00000511752 GPC6Q9Y625 555 aaPredicted RBP11.27□□□□□ -0.61
PTCD2-209ENST00000511752 USP9YO00507 2555 aaPredicted RBP11.27□□□□□ -0.61
PTCD2-209ENST00000511752 ASH1LQ9NR48 2969 aaKnown RBP11.27□□□□□ -0.61
PTCD2-209ENST00000511752 SPTBN1Q01082 2364 aaKnown RBP11.26□□□□□ -0.61
PTCD2-209ENST00000511752 MED12Q93074 2177 aa11.26□□□□□ -0.61
PTCD2-209ENST00000511752 CENPVL1A0A0U1RR11 272 aa11.26□□□□□ -0.61
PTCD2-209ENST00000511752 PRAMEF27A3QJZ7 478 aa11.26□□□□□ -0.61
PTCD2-209ENST00000511752 NKX2-6A6NCS4 301 aa11.26□□□□□ -0.61
PTCD2-209ENST00000511752 KDM4EB2RXH2 506 aaPredicted RBP11.26□□□□□ -0.61
PTCD2-209ENST00000511752 SHISA8B8ZZ34 492 aa11.26□□□□□ -0.61
PTCD2-209ENST00000511752 DVL2O14641 736 aa11.26□□□□□ -0.61
PTCD2-209ENST00000511752 ANGPT2O15123 496 aa11.26□□□□□ -0.61
PTCD2-209ENST00000511752 OIP5O43482 229 aa11.26□□□□□ -0.61
PTCD2-209ENST00000511752 BCHEP06276 602 aa11.26□□□□□ -0.61
PTCD2-209ENST00000511752 CHRM4P08173 479 aa11.26□□□□□ -0.61
PTCD2-209ENST00000511752 LINGO3P0C6S8 592 aa11.26□□□□□ -0.61
PTCD2-209ENST00000511752 UBTFL6P0CB48 400 aaPredicted RBP11.26□□□□□ -0.61
PTCD2-209ENST00000511752 IL7RP16871 459 aa11.26□□□□□ -0.61
PTCD2-209ENST00000511752 HOXB9P17482 250 aaPredicted RBP11.26□□□□□ -0.61
PTCD2-209ENST00000511752 ADH6P28332 368 aa11.26□□□□□ -0.61
PTCD2-209ENST00000511752 GRNP28799 593 aaKnown RBP11.26□□□□□ -0.61
PTCD2-209ENST00000511752 RAC1P63000 192 aa11.26□□□□□ -0.61
PTCD2-209ENST00000511752 KCNJ10P78508 379 aa11.26□□□□□ -0.61
PTCD2-209ENST00000511752 SKP2Q13309 424 aa11.26□□□□□ -0.61
PTCD2-209ENST00000511752 MAPK14Q16539 360 aa11.26□□□□□ -0.61
PTCD2-209ENST00000511752 PAGE3Q5JUK9 113 aa11.26□□□□□ -0.61
PTCD2-209ENST00000511752 PDSS1Q5T2R2 415 aa11.26□□□□□ -0.61
PTCD2-209ENST00000511752 P4HA3Q7Z4N8 544 aa11.26□□□□□ -0.61
PTCD2-209ENST00000511752 ADGRE4PQ86SQ3 457 aa11.26□□□□□ -0.61
PTCD2-209ENST00000511752 CMIPQ8IY22 773 aa11.26□□□□□ -0.61
PTCD2-209ENST00000511752 PEX5LQ8IYB4 626 aa11.26□□□□□ -0.61
PTCD2-209ENST00000511752 WDR60Q8WVS4 1066 aa11.26□□□□□ -0.61
PTCD2-209ENST00000511752 ARSGQ96EG1 525 aa11.26□□□□□ -0.61
PTCD2-209ENST00000511752 THUMPD3Q9BV44 507 aaKnown RBP11.26□□□□□ -0.61
PTCD2-209ENST00000511752 PINK1Q9BXM7 581 aa11.26□□□□□ -0.61
PTCD2-209ENST00000511752 SLC38A1Q9H2H9 487 aa11.26□□□□□ -0.61
PTCD2-209ENST00000511752 RUBCNLQ9H714 662 aa11.26□□□□□ -0.61
PTCD2-209ENST00000511752 CACYBPQ9HB71 228 aaKnown RBP11.26□□□□□ -0.61
PTCD2-209ENST00000511752 KLHL14Q9P2G3 628 aa11.26□□□□□ -0.61
PTCD2-209ENST00000511752 CLCF1Q9UBD9 225 aa11.26□□□□□ -0.61
PTCD2-209ENST00000511752 ZNF629Q9UEG4 869 aaPredicted RBP11.26□□□□□ -0.61
PTCD2-209ENST00000511752 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.26□□□□□ -0.61
PTCD2-209ENST00000511752 NDUFAF1Q9Y375 327 aa11.26□□□□□ -0.61
PTCD2-209ENST00000511752 CACNA1CQ13936 2221 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 KIAA1549Q9HCM3 1950 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 AGAP5A6NIR3 686 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 EVPLLA8MZ36 301 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 HNRNPRO43390 633 aaKnown RBP11.25□□□□□ -0.61
PTCD2-209ENST00000511752 DBIP07108 87 aaKnown RBP11.25□□□□□ -0.61
PTCD2-209ENST00000511752 SNRPB2P08579 225 aaKnown RBP11.25□□□□□ -0.61
PTCD2-209ENST00000511752 TFPTP0C1Z6 253 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 TMIGD3P0DMS9 266 aaPredicted RBP11.25□□□□□ -0.61
PTCD2-209ENST00000511752 PRKCAP17252 672 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 PGCP20142 388 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 CTSSP25774 331 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 PSMA4P25789 261 aaKnown RBP11.25□□□□□ -0.61
PTCD2-209ENST00000511752 ELK4P28324 431 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 OPRM1P35372 400 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 PGM1P36871 562 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 SUCLG1P53597 346 aaKnown RBP11.25□□□□□ -0.61
PTCD2-209ENST00000511752 CLDN15P56746 228 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 CLDN20P56880 219 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 SF3A3Q12874 501 aaKnown RBP eCLIP11.25□□□□□ -0.61
PTCD2-209ENST00000511752 FOXF1Q12946 379 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 QPRTQ15274 297 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 SGCBQ16585 318 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 ZNF787Q6DD87 383 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 CGB2Q6NT52 195 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 METTL25Q8N6Q8 603 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 C9orf106Q8NAJ2 232 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 NAXEQ8NCW5 288 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 FBXO27Q8NI29 283 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 POC1BQ8TC44 478 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 SLC38A5Q8WUX1 472 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 TMEM234Q8WY98 164 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 ZG16BQ96DA0 208 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 LRRC46Q96FV0 321 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 MRGPRX4Q96LA9 322 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 DOCK7Q96N67 2140 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 NPAS1Q99742 590 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 KLHDC3Q9BQ90 382 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 UCK2Q9BZX2 261 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 QRSL1Q9H0R6 528 aaKnown RBP11.25□□□□□ -0.61
PTCD2-209ENST00000511752 PAQR5Q9NXK6 330 aaPredicted RBP11.25□□□□□ -0.61
PTCD2-209ENST00000511752 SLC25A37Q9NYZ2 338 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 VAPAQ9P0L0 249 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 SLAMF8Q9P0V8 285 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 HCFC1P51610 2035 aa11.25□□□□□ -0.61
PTCD2-209ENST00000511752 SPTAN1Q13813 2472 aaKnown RBP11.24□□□□□ -0.61
PTCD2-209ENST00000511752 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.24□□□□□ -0.61
PTCD2-209ENST00000511752 A0A0G2JPF8 293 aa11.24□□□□□ -0.61
PTCD2-209ENST00000511752 SLC22A20A6NK97 555 aa11.24□□□□□ -0.61
PTCD2-209ENST00000511752 GJE1A6NN92 205 aa11.24□□□□□ -0.61
PTCD2-209ENST00000511752 HNRNPCL2B2RXH8 293 aa11.24□□□□□ -0.61
PTCD2-209ENST00000511752 HNRNPCL3B7ZW38 293 aa11.24□□□□□ -0.61
PTCD2-209ENST00000511752 C5orf58C9J3I9 102 aa11.24□□□□□ -0.61
PTCD2-209ENST00000511752 EIF1AYO14602 144 aaKnown RBP11.24□□□□□ -0.61
PTCD2-209ENST00000511752 HNRNPCL1O60812 293 aaKnown RBP11.24□□□□□ -0.61
PTCD2-209ENST00000511752 RCBTB2O95199 551 aa11.24□□□□□ -0.61
PTCD2-209ENST00000511752 IL18BPO95998 194 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms