RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 HTR3CQ8WXA8 447 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 ZNF606Q8WXB4 792 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 GTF3AQ92664 365 aaKnown RBP4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 KCNJ9Q92806 393 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 UCN3Q969E3 161 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 SLC25A46Q96AG3 418 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 SCRN2Q96FV2 425 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 MRPL48Q96GC5 212 aaKnown RBP4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 FCRL1Q96LA6 429 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 TSGA13Q96PP4 275 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 VAT1Q99536 393 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 SDHCQ99643 169 aaPredicted RBP4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 SSX3Q99909 188 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 TREX2Q9BQ50 279 aaPredicted RBP4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 CHCHD6Q9BRQ6 235 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 CCM2Q9BSQ5 444 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 EDEM2Q9BV94 578 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 PAPOLGQ9BWT3 736 aaKnown RBP4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 ABCG8Q9H221 673 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 MIXL1Q9H2W2 232 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 DPAGT1Q9H3H5 408 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 PIGMQ9H3S5 423 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 ASB7Q9H672 318 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 XKR8Q9H6D3 395 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 MAP6D1Q9H9H5 199 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 TMEM138Q9NPI0 162 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 ABCB8Q9NUT2 735 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 TMLHEQ9NVH6 421 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 MDFICQ9P1T7 246 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 SEC14L3Q9UDX4 400 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 PSORS1C1Q9UIG5 152 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 SLC45A1Q9Y2W3 748 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 TRPV2Q9Y5S1 764 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 PRRC2BQ5JSZ5 2229 aaKnown RBP4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 ZFHX2Q9C0A1 2572 aaPredicted RBP4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 BAHCC1Q9P281 2608 aa4.23□□□□□ -1.73
PDLIM5-211ENST00000508531 PLXNA1Q9UIW2 1896 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 ELOVL7A1L3X0 281 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 HYKKA2RU49 373 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 HMSDA8MTL9 139 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 A8MUA0 341 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 C1orf196B1AJZ1 125 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 C5orf58C9J3I9 102 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 STMND1H3BQB6 276 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 L7N2F9 121 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 PCDH17O14917 1159 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 PER2O15055 1255 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 ADAMDEC1O15204 470 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 AKR7A2O43488 359 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 XPNPEP2O43895 674 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 SDC3O75056 442 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 CRCPO75575 148 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 SLC22A3O75751 556 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 NFATC1O95644 943 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 SERPINA3P01011 423 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 EGFP01133 1207 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 IGHV2-70P01814 119 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 APOC3P02656 99 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 FCER2P06734 321 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 CNPP09543 421 aaKnown RBP4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 TNNI1P19237 187 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 MAGP20916 626 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 PAICSP22234 425 aaKnown RBP4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 SLC6A1P30531 599 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 AKT1P31749 480 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 MAP2K4P45985 399 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 HNMTP50135 292 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 RAB5CP51148 216 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 POLR2JP52435 117 aaKnown RBP4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 RIDAP52758 137 aaKnown RBP4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 CAPZA1P52907 286 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 SLC37A1P57057 533 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 CDC42P60953 191 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 DYNLL1P63167 89 aaKnown RBP4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 PITPNAQ00169 270 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 PLIN5Q00G26 463 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 YWHAHQ04917 246 aaPredicted RBP4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 BIKQ13323 160 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 PICALMQ13492 652 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 RAPSNQ13702 412 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 SNTB1Q13884 538 aaKnown RBP4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 TAF1AQ15573 450 aaPredicted RBP4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 SNAPC1Q16533 368 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 ATP6AP1LQ52LC2 224 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 PAN3Q58A45 887 aaKnown RBP4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 FBXO48Q5FWF7 155 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 FAM171A1Q5VUB5 890 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 SLC22A10Q63ZE4 541 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 ATG9BQ674R7 924 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 NAPEPLDQ6IQ20 393 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 KDELC1Q6UW63 502 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 TMPRSS11FQ6ZWK6 438 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 ZNF534Q76KX8 674 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 FAM122BQ7Z309 247 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 ADGRA1Q86SQ6 560 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 RBM23Q86U06 439 aaKnown RBP4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 KCNMB4Q86W47 210 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 IFNEQ86WN2 208 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 NR2C2APQ86WQ0 139 aa4.22□□□□□ -1.73
PDLIM5-211ENST00000508531 GPSM1Q86YR5 675 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms