RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-255ENST00000504927 HNRNPCL1O60812 293 aaKnown RBP18.67■□□□□ 0.58
DDR1-255ENST00000504927 DNAJA2O60884 412 aa18.67■□□□□ 0.58
DDR1-255ENST00000504927 IL2RAP01589 272 aa18.67■□□□□ 0.58
DDR1-255ENST00000504927 DBIP07108 87 aaKnown RBP18.67■□□□□ 0.58
DDR1-255ENST00000504927 LINGO3P0C6S8 592 aa18.67■□□□□ 0.58
DDR1-255ENST00000504927 HNRNPCL4P0DMR1 293 aa18.67■□□□□ 0.58
DDR1-255ENST00000504927 PRAMEF8Q5VWM4 474 aa18.67■□□□□ 0.58
DDR1-255ENST00000504927 PRAMEF7Q5VXH5 474 aa18.67■□□□□ 0.58
DDR1-255ENST00000504927 ADGRE4PQ86SQ3 457 aa18.67■□□□□ 0.58
DDR1-255ENST00000504927 MSRB3Q8IXL7 192 aa18.67■□□□□ 0.58
DDR1-255ENST00000504927 PEX5LQ8IYB4 626 aa18.67■□□□□ 0.58
DDR1-255ENST00000504927 METTL25Q8N6Q8 603 aa18.67■□□□□ 0.58
DDR1-255ENST00000504927 OR5M1Q8NGP8 315 aa18.67■□□□□ 0.58
DDR1-255ENST00000504927 TUBA1CQ9BQE3 449 aa18.67■□□□□ 0.58
DDR1-255ENST00000504927 CHST11Q9NPF2 352 aa18.67■□□□□ 0.58
DDR1-255ENST00000504927 A0A0G2JNJ9 132 aa18.66■□□□□ 0.58
DDR1-255ENST00000504927 H3BML4 177 aa18.66■□□□□ 0.58
DDR1-255ENST00000504927 SLC22A2O15244 555 aa18.66■□□□□ 0.58
DDR1-255ENST00000504927 CD1EP15812 388 aa18.66■□□□□ 0.58
DDR1-255ENST00000504927 IL7RP16871 459 aa18.66■□□□□ 0.58
DDR1-255ENST00000504927 GPX2P18283 190 aa18.66■□□□□ 0.58
DDR1-255ENST00000504927 ME2P23368 584 aa18.66■□□□□ 0.58
DDR1-255ENST00000504927 HTR1EP28566 365 aa18.66■□□□□ 0.58
DDR1-255ENST00000504927 CEACAM8P31997 349 aaPredicted RBP18.66■□□□□ 0.58
DDR1-255ENST00000504927 PGM1P36871 562 aa18.66■□□□□ 0.58
DDR1-255ENST00000504927 RNF144AP50876 292 aaPredicted RBP18.66■□□□□ 0.58
DDR1-255ENST00000504927 RAC1P63000 192 aa18.66■□□□□ 0.58
DDR1-255ENST00000504927 SF3A3Q12874 501 aaKnown RBP eCLIP18.66■□□□□ 0.589e-7■■■■□ 24.7
DDR1-255ENST00000504927 SKP2Q13309 424 aa18.66■□□□□ 0.58
DDR1-255ENST00000504927 MAPRE2Q15555 327 aa18.66■□□□□ 0.58
DDR1-255ENST00000504927 MAPK11Q15759 364 aa18.66■□□□□ 0.58
DDR1-255ENST00000504927 RUNDC3AQ59EK9 446 aa18.66■□□□□ 0.58
DDR1-255ENST00000504927 SEM1Q6ZVN7 128 aa18.66■□□□□ 0.58
DDR1-255ENST00000504927 TMCO5AQ8N6Q1 288 aa18.66■□□□□ 0.58
DDR1-255ENST00000504927 C10orf82Q8WW14 230 aa18.66■□□□□ 0.58
DDR1-255ENST00000504927 WNT2BQ93097 391 aa18.66■□□□□ 0.58
DDR1-255ENST00000504927 TM9SF2Q99805 663 aa18.66■□□□□ 0.58
DDR1-255ENST00000504927 TREX2Q9BQ50 279 aaPredicted RBP18.66■□□□□ 0.58
DDR1-255ENST00000504927 RUBCNLQ9H714 662 aa18.66■□□□□ 0.58
DDR1-255ENST00000504927 A4GALTQ9NPC4 353 aa18.66■□□□□ 0.58
DDR1-255ENST00000504927 EXOSC3Q9NQT5 275 aaKnown RBP18.66■□□□□ 0.58
DDR1-255ENST00000504927 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.66■□□□□ 0.58
DDR1-255ENST00000504927 Q9UFV3 132 aa18.66■□□□□ 0.58
DDR1-255ENST00000504927 PRDM4Q9UKN5 801 aa18.66■□□□□ 0.58
DDR1-255ENST00000504927 NAV2Q8IVL1 2488 aa18.65■□□□□ 0.58
DDR1-255ENST00000504927 CENPVL1A0A0U1RR11 272 aa18.65■□□□□ 0.58
DDR1-255ENST00000504927 MBD3L4A6NDZ8 208 aaPredicted RBP18.65■□□□□ 0.58
DDR1-255ENST00000504927 MBD3L3A6NE82 208 aaPredicted RBP18.65■□□□□ 0.58
DDR1-255ENST00000504927 MBD3L5A6NJ08 208 aaPredicted RBP18.65■□□□□ 0.58
DDR1-255ENST00000504927 OIP5O43482 229 aa18.65■□□□□ 0.58
DDR1-255ENST00000504927 CYP7B1O75881 506 aa18.65■□□□□ 0.58
DDR1-255ENST00000504927 BCHEP06276 602 aa18.65■□□□□ 0.58
DDR1-255ENST00000504927 UBTFL6P0CB48 400 aaPredicted RBP18.65■□□□□ 0.58
DDR1-255ENST00000504927 PGCP20142 388 aa18.65■□□□□ 0.58
DDR1-255ENST00000504927 RPS4Y1P22090 263 aaKnown RBP18.65■□□□□ 0.58
DDR1-255ENST00000504927 PSMA4P25789 261 aaKnown RBP18.65■□□□□ 0.58
DDR1-255ENST00000504927 ELK4P28324 431 aa18.65■□□□□ 0.58
DDR1-255ENST00000504927 RPS3AP61247 264 aaKnown RBP18.65■□□□□ 0.58
DDR1-255ENST00000504927 KLF10Q13118 480 aa18.65■□□□□ 0.58
DDR1-255ENST00000504927 ZSWIM7Q19AV6 140 aa18.65■□□□□ 0.58
DDR1-255ENST00000504927 COQ5Q5HYK3 327 aa18.65■□□□□ 0.58
DDR1-255ENST00000504927 DHDDSQ86SQ9 333 aa18.65■□□□□ 0.58
DDR1-255ENST00000504927 CCDC71Q8IV32 467 aaPredicted RBP18.65■□□□□ 0.58
DDR1-255ENST00000504927 FAM71CQ8NEG0 241 aa18.65■□□□□ 0.58
DDR1-255ENST00000504927 MBD3L2Q8NHZ7 208 aaPredicted RBP18.65■□□□□ 0.58
DDR1-255ENST00000504927 TMEM234Q8WY98 164 aa18.65■□□□□ 0.58
DDR1-255ENST00000504927 MRGPRX4Q96LA9 322 aa18.65■□□□□ 0.58
DDR1-255ENST00000504927 RNF145Q96MT1 663 aa18.65■□□□□ 0.58
DDR1-255ENST00000504927 THUMPD3Q9BV44 507 aaKnown RBP18.65■□□□□ 0.58
DDR1-255ENST00000504927 CACYBPQ9HB71 228 aaKnown RBP18.65■□□□□ 0.58
DDR1-255ENST00000504927 BCL2L10Q9HD36 194 aa18.65■□□□□ 0.58
DDR1-255ENST00000504927 KCNJ16Q9NPI9 418 aa18.65■□□□□ 0.58
DDR1-255ENST00000504927 ZNF232Q9UNY5 417 aa18.65■□□□□ 0.58
DDR1-255ENST00000504927 CELSR2Q9HCU4 2923 aa18.64■□□□□ 0.58
DDR1-255ENST00000504927 NCOA6Q14686 2063 aaPredicted RBP18.64■□□□□ 0.57
DDR1-255ENST00000504927 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.64■□□□□ 0.57
DDR1-255ENST00000504927 CLCA1A8K7I4 914 aa18.64■□□□□ 0.57
DDR1-255ENST00000504927 C5orf58C9J3I9 102 aa18.64■□□□□ 0.57
DDR1-255ENST00000504927 PRSS44E7EML9 344 aa18.64■□□□□ 0.57
DDR1-255ENST00000504927 ETV2O00321 342 aaPredicted RBP18.64■□□□□ 0.57
DDR1-255ENST00000504927 CCDC22O60826 627 aa18.64■□□□□ 0.57
DDR1-255ENST00000504927 NPPAP01160 153 aa18.64■□□□□ 0.57
DDR1-255ENST00000504927 COL8A1P27658 744 aa18.64■□□□□ 0.57
DDR1-255ENST00000504927 SLC6A8P48029 635 aa18.64■□□□□ 0.57
DDR1-255ENST00000504927 CCR4P51679 360 aa18.64■□□□□ 0.57
DDR1-255ENST00000504927 SUCLG1P53597 346 aaKnown RBP18.64■□□□□ 0.57
DDR1-255ENST00000504927 NDUFAF6Q330K2 333 aa18.64■□□□□ 0.57
DDR1-255ENST00000504927 SLC25A53Q5H9E4 307 aa18.64■□□□□ 0.57
DDR1-255ENST00000504927 GCNT6Q5T4J0 391 aa18.64■□□□□ 0.57
DDR1-255ENST00000504927 SP5Q6BEB4 398 aaPredicted RBP18.64■□□□□ 0.57
DDR1-255ENST00000504927 RETREG3Q86VR2 466 aa18.64■□□□□ 0.57
DDR1-255ENST00000504927 UBQLNLQ8IYU4 475 aa18.64■□□□□ 0.57
DDR1-255ENST00000504927 TNIP2Q8NFZ5 429 aa18.64■□□□□ 0.57
DDR1-255ENST00000504927 POC1BQ8TC44 478 aa18.64■□□□□ 0.57
DDR1-255ENST00000504927 WDR60Q8WVS4 1066 aa18.64■□□□□ 0.57
DDR1-255ENST00000504927 ST8SIA1Q92185 356 aa18.64■□□□□ 0.57
DDR1-255ENST00000504927 TMEM19Q96HH6 336 aa18.64■□□□□ 0.57
DDR1-255ENST00000504927 ZFP3Q96NJ6 502 aa18.64■□□□□ 0.57
DDR1-255ENST00000504927 ANKRD27Q96NW4 1050 aa18.64■□□□□ 0.57
DDR1-255ENST00000504927 NSRP1Q9H0G5 558 aaKnown RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms