RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 MAL2Q969L2 176 aa21.16■□□□□ 0.98
CLIC3-203ENST00000494426 ANKRD27Q96NW4 1050 aa21.16■□□□□ 0.98
CLIC3-203ENST00000494426 CGREF1Q99674 301 aa21.16■□□□□ 0.98
CLIC3-203ENST00000494426 TRIM8Q9BZR9 551 aa21.16■□□□□ 0.98
CLIC3-203ENST00000494426 A4GALTQ9NPC4 353 aa21.16■□□□□ 0.98
CLIC3-203ENST00000494426 ST6GALNAC1Q9NSC7 600 aaPredicted RBP21.16■□□□□ 0.98
CLIC3-203ENST00000494426 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.16■□□□□ 0.98
CLIC3-203ENST00000494426 ICE1Q9Y2F5 2266 aa21.16■□□□□ 0.98
CLIC3-203ENST00000494426 GMNCA6NCL1 334 aa21.15■□□□□ 0.98
CLIC3-203ENST00000494426 H3BML4 177 aa21.15■□□□□ 0.98
CLIC3-203ENST00000494426 UBTFL6P0CB48 400 aaPredicted RBP21.15■□□□□ 0.98
CLIC3-203ENST00000494426 ZNF17P17021 662 aa21.15■□□□□ 0.98
CLIC3-203ENST00000494426 CRISP3P54108 245 aa21.15■□□□□ 0.98
CLIC3-203ENST00000494426 NFYCQ13952 458 aa21.15■□□□□ 0.98
CLIC3-203ENST00000494426 SELPLGQ14242 412 aa21.15■□□□□ 0.98
CLIC3-203ENST00000494426 NSUN5P2Q63ZY6 315 aa21.15■□□□□ 0.98
CLIC3-203ENST00000494426 CCDC71Q8IV32 467 aaPredicted RBP21.15■□□□□ 0.98
CLIC3-203ENST00000494426 TOR1AIP2Q8NFQ8 470 aa21.15■□□□□ 0.98
CLIC3-203ENST00000494426 SDCCAG3Q96C92 435 aa21.15■□□□□ 0.98
CLIC3-203ENST00000494426 RNF145Q96MT1 663 aa21.15■□□□□ 0.98
CLIC3-203ENST00000494426 TRIB1Q96RU8 372 aa21.15■□□□□ 0.98
CLIC3-203ENST00000494426 TREX2Q9BQ50 279 aaPredicted RBP21.15■□□□□ 0.98
CLIC3-203ENST00000494426 CALML5Q9NZT1 146 aa21.15■□□□□ 0.98
CLIC3-203ENST00000494426 ARMCX1Q9P291 453 aa21.15■□□□□ 0.98
CLIC3-203ENST00000494426 PLEKHB1Q9UF11 243 aaPredicted RBP21.15■□□□□ 0.98
CLIC3-203ENST00000494426 SLC35A3Q9Y2D2 325 aa21.15■□□□□ 0.98
CLIC3-203ENST00000494426 USP9YO00507 2555 aaPredicted RBP21.15■□□□□ 0.98
CLIC3-203ENST00000494426 UTP20O75691 2785 aaKnown RBP21.14■□□□□ 0.98
CLIC3-203ENST00000494426 A0A0G2JNJ9 132 aa21.14■□□□□ 0.97
CLIC3-203ENST00000494426 H0Y3Z8 333 aa21.14■□□□□ 0.97
CLIC3-203ENST00000494426 H0YC42 278 aa21.14■□□□□ 0.97
CLIC3-203ENST00000494426 EFNA2O43921 213 aa21.14■□□□□ 0.97
CLIC3-203ENST00000494426 CYP7B1O75881 506 aa21.14■□□□□ 0.97
CLIC3-203ENST00000494426 POU3F2P20265 443 aaPredicted RBP21.14■□□□□ 0.97
CLIC3-203ENST00000494426 IL11P20809 199 aa21.14■□□□□ 0.97
CLIC3-203ENST00000494426 TPD52P55327 224 aaPredicted RBP21.14■□□□□ 0.97
CLIC3-203ENST00000494426 CLDN20P56880 219 aa21.14■□□□□ 0.97
CLIC3-203ENST00000494426 FOXF1Q12946 379 aa21.14■□□□□ 0.97
CLIC3-203ENST00000494426 PLXDC2Q6UX71 529 aa21.14■□□□□ 0.97
CLIC3-203ENST00000494426 MAMDC2Q7Z304 686 aaPredicted RBP21.14■□□□□ 0.97
CLIC3-203ENST00000494426 TMCO5AQ8N6Q1 288 aa21.14■□□□□ 0.97
CLIC3-203ENST00000494426 CNOT9Q92600 299 aaKnown RBP21.14■□□□□ 0.97
CLIC3-203ENST00000494426 THUMPD3Q9BV44 507 aaKnown RBP21.14■□□□□ 0.97
CLIC3-203ENST00000494426 CALHM2Q9HA72 323 aa21.14■□□□□ 0.97
CLIC3-203ENST00000494426 BCL2L10Q9HD36 194 aa21.14■□□□□ 0.97
CLIC3-203ENST00000494426 FAM53CQ9NYF3 392 aa21.14■□□□□ 0.97
CLIC3-203ENST00000494426 Q9UFV3 132 aa21.14■□□□□ 0.97
CLIC3-203ENST00000494426 AP4B1Q9Y6B7 739 aa21.14■□□□□ 0.97
CLIC3-203ENST00000494426 A0A0G2JPF8 293 aa21.13■□□□□ 0.97
CLIC3-203ENST00000494426 LOC100653049A0A140TA62 436 aa21.13■□□□□ 0.97
CLIC3-203ENST00000494426 CD8B2A6NJW9 211 aa21.13■□□□□ 0.97
CLIC3-203ENST00000494426 EVPLLA8MZ36 301 aa21.13■□□□□ 0.97
CLIC3-203ENST00000494426 HNRNPCL2B2RXH8 293 aa21.13■□□□□ 0.97
CLIC3-203ENST00000494426 HNRNPCL3B7ZW38 293 aa21.13■□□□□ 0.97
CLIC3-203ENST00000494426 SNX3O60493 162 aa21.13■□□□□ 0.97
CLIC3-203ENST00000494426 HNRNPCL1O60812 293 aaKnown RBP21.13■□□□□ 0.97
CLIC3-203ENST00000494426 ADAM11O75078 769 aa21.13■□□□□ 0.97
CLIC3-203ENST00000494426 KRT34O76011 436 aa21.13■□□□□ 0.97
CLIC3-203ENST00000494426 NUDT14O95848 222 aa21.13■□□□□ 0.97
CLIC3-203ENST00000494426 DBIP07108 87 aaKnown RBP21.13■□□□□ 0.97
CLIC3-203ENST00000494426 HNRNPCL4P0DMR1 293 aa21.13■□□□□ 0.97
CLIC3-203ENST00000494426 ARAFP10398 606 aa21.13■□□□□ 0.97
CLIC3-203ENST00000494426 PRKCAP17252 672 aa21.13■□□□□ 0.97
CLIC3-203ENST00000494426 CEACAM8P31997 349 aaPredicted RBP21.13■□□□□ 0.97
CLIC3-203ENST00000494426 ART3Q13508 389 aa21.13■□□□□ 0.97
CLIC3-203ENST00000494426 SF3B4Q15427 424 aaKnown RBP eCLIP21.13■□□□□ 0.97
CLIC3-203ENST00000494426 ADRM1Q16186 407 aa21.13■□□□□ 0.97
CLIC3-203ENST00000494426 GCNT6Q5T4J0 391 aa21.13■□□□□ 0.97
CLIC3-203ENST00000494426 RIPPLY2Q5TAB7 128 aa21.13■□□□□ 0.97
CLIC3-203ENST00000494426 GGNQ86UU5 652 aa21.13■□□□□ 0.97
CLIC3-203ENST00000494426 SNX32Q86XE0 403 aa21.13■□□□□ 0.97
CLIC3-203ENST00000494426 VRK2Q86Y07 508 aa21.13■□□□□ 0.97
CLIC3-203ENST00000494426 LACC1Q8IV20 430 aa21.13■□□□□ 0.97
CLIC3-203ENST00000494426 UBQLNLQ8IYU4 475 aa21.13■□□□□ 0.97
CLIC3-203ENST00000494426 TNIP2Q8NFZ5 429 aa21.13■□□□□ 0.97
CLIC3-203ENST00000494426 OR10Q1Q8NGQ4 319 aa21.13■□□□□ 0.97
CLIC3-203ENST00000494426 FBXO27Q8NI29 283 aa21.13■□□□□ 0.97
CLIC3-203ENST00000494426 WDR60Q8WVS4 1066 aa21.13■□□□□ 0.97
CLIC3-203ENST00000494426 UCN2Q96RP3 112 aa21.13■□□□□ 0.97
CLIC3-203ENST00000494426 FAM107BQ9H098 131 aa21.13■□□□□ 0.97
CLIC3-203ENST00000494426 COQ3Q9NZJ6 369 aa21.13■□□□□ 0.97
CLIC3-203ENST00000494426 CORO2BQ9UQ03 480 aa21.13■□□□□ 0.97
CLIC3-203ENST00000494426 CAPN7Q9Y6W3 813 aa21.13■□□□□ 0.97
CLIC3-203ENST00000494426 TNFSF12-TNFSF13A0A0A6YY99 330 aa21.12■□□□□ 0.97
CLIC3-203ENST00000494426 CLCA1A8K7I4 914 aa21.12■□□□□ 0.97
CLIC3-203ENST00000494426 FAM47E-STBD1D6RA91 191 aa21.12■□□□□ 0.97
CLIC3-203ENST00000494426 ETV2O00321 342 aaPredicted RBP21.12■□□□□ 0.97
CLIC3-203ENST00000494426 SLC22A2O15244 555 aa21.12■□□□□ 0.97
CLIC3-203ENST00000494426 NTN1O95631 604 aa21.12■□□□□ 0.97
CLIC3-203ENST00000494426 NID1P14543 1247 aa21.12■□□□□ 0.97
CLIC3-203ENST00000494426 IL7RP16871 459 aa21.12■□□□□ 0.97
CLIC3-203ENST00000494426 TIMP3P35625 211 aa21.12■□□□□ 0.97
CLIC3-203ENST00000494426 EIF1P41567 113 aaKnown RBP21.12■□□□□ 0.97
CLIC3-203ENST00000494426 CCR4P51679 360 aa21.12■□□□□ 0.97
CLIC3-203ENST00000494426 MTPNP58546 118 aa21.12■□□□□ 0.97
CLIC3-203ENST00000494426 CBFBQ13951 182 aa21.12■□□□□ 0.97
CLIC3-203ENST00000494426 CAPRIN1Q14444 709 aaKnown RBP21.12■□□□□ 0.97
CLIC3-203ENST00000494426 QPRTQ15274 297 aa21.12■□□□□ 0.97
CLIC3-203ENST00000494426 MAPRE2Q15555 327 aa21.12■□□□□ 0.97
CLIC3-203ENST00000494426 SLC25A53Q5H9E4 307 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms