RNA–Protein interactions for RNA: ENST00000492275.5

TTC3-223, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-223ENST00000492275 CALML5Q9NZT1 146 aa23.31■■□□□ 1.32
TTC3-223ENST00000492275 COL12A1Q99715 3063 aa23.31■■□□□ 1.32
TTC3-223ENST00000492275 DOCK7Q96N67 2140 aa23.3■■□□□ 1.32
TTC3-223ENST00000492275 LOC100653049A0A140TA62 436 aa23.3■■□□□ 1.32
TTC3-223ENST00000492275 A1L4Q6 167 aa23.3■■□□□ 1.32
TTC3-223ENST00000492275 EVPLLA8MZ36 301 aa23.3■■□□□ 1.32
TTC3-223ENST00000492275 LINC01387J3KSC0 135 aa23.3■■□□□ 1.32
TTC3-223ENST00000492275 DNAJA2O60884 412 aa23.3■■□□□ 1.32
TTC3-223ENST00000492275 KRT34O76011 436 aa23.3■■□□□ 1.32
TTC3-223ENST00000492275 UBTFL6P0CB48 400 aaPredicted RBP23.3■■□□□ 1.32
TTC3-223ENST00000492275 PEPDP12955 493 aa23.3■■□□□ 1.32
TTC3-223ENST00000492275 ZNF17P17021 662 aa23.3■■□□□ 1.32
TTC3-223ENST00000492275 CRISP3P54108 245 aa23.3■■□□□ 1.32
TTC3-223ENST00000492275 CLDN15P56746 228 aa23.3■■□□□ 1.32
TTC3-223ENST00000492275 SELPLGQ14242 412 aa23.3■■□□□ 1.32
TTC3-223ENST00000492275 XKRXQ6PP77 449 aa23.3■■□□□ 1.32
TTC3-223ENST00000492275 CPLX4Q7Z7G2 160 aa23.3■■□□□ 1.32
TTC3-223ENST00000492275 SNX32Q86XE0 403 aa23.3■■□□□ 1.32
TTC3-223ENST00000492275 RND1Q92730 232 aa23.3■■□□□ 1.32
TTC3-223ENST00000492275 THUMPD3Q9BV44 507 aaKnown RBP23.3■■□□□ 1.32
TTC3-223ENST00000492275 SLC35A3Q9Y2D2 325 aa23.3■■□□□ 1.32
TTC3-223ENST00000492275 CAPN7Q9Y6W3 813 aa23.3■■□□□ 1.32
TTC3-223ENST00000492275 H3BML4 177 aa23.29■■□□□ 1.32
TTC3-223ENST00000492275 SLC22A2O15244 555 aa23.29■■□□□ 1.32
TTC3-223ENST00000492275 CCDC22O60826 627 aa23.29■■□□□ 1.32
TTC3-223ENST00000492275 CYP7B1O75881 506 aa23.29■■□□□ 1.32
TTC3-223ENST00000492275 TOXO94900 526 aa23.29■■□□□ 1.32
TTC3-223ENST00000492275 NUDT14O95848 222 aa23.29■■□□□ 1.32
TTC3-223ENST00000492275 POU3F2P20265 443 aaPredicted RBP23.29■■□□□ 1.32
TTC3-223ENST00000492275 AGAP20933 346 aa23.29■■□□□ 1.32
TTC3-223ENST00000492275 SUCLG1P53597 346 aaKnown RBP23.29■■□□□ 1.32
TTC3-223ENST00000492275 CAPRIN1Q14444 709 aaKnown RBP23.29■■□□□ 1.32
TTC3-223ENST00000492275 MAPRE2Q15555 327 aa23.29■■□□□ 1.32
TTC3-223ENST00000492275 GCNT6Q5T4J0 391 aa23.29■■□□□ 1.32
TTC3-223ENST00000492275 TMCO5AQ8N6Q1 288 aa23.29■■□□□ 1.32
TTC3-223ENST00000492275 TOR1AIP2Q8NFQ8 470 aa23.29■■□□□ 1.32
TTC3-223ENST00000492275 RNF145Q96MT1 663 aa23.29■■□□□ 1.32
TTC3-223ENST00000492275 CCDC106Q9BWC9 280 aa23.29■■□□□ 1.32
TTC3-223ENST00000492275 NSRP1Q9H0G5 558 aaKnown RBP23.29■■□□□ 1.32
TTC3-223ENST00000492275 BCL2L10Q9HD36 194 aa23.29■■□□□ 1.32
TTC3-223ENST00000492275 CORO2BQ9UQ03 480 aa23.29■■□□□ 1.32
TTC3-223ENST00000492275 A0A0G2JPF8 293 aa23.28■■□□□ 1.32
TTC3-223ENST00000492275 TMEM247A6NEH6 219 aa23.28■■□□□ 1.32
TTC3-223ENST00000492275 HNRNPCL2B2RXH8 293 aa23.28■■□□□ 1.32
TTC3-223ENST00000492275 HNRNPCL3B7ZW38 293 aa23.28■■□□□ 1.32
TTC3-223ENST00000492275 FAM47E-STBD1D6RA91 191 aa23.28■■□□□ 1.32
TTC3-223ENST00000492275 H0Y3Z8 333 aa23.28■■□□□ 1.32
TTC3-223ENST00000492275 H0YC42 278 aa23.28■■□□□ 1.32
TTC3-223ENST00000492275 HNRNPCL1O60812 293 aaKnown RBP23.28■■□□□ 1.32
TTC3-223ENST00000492275 DBIP07108 87 aaKnown RBP23.28■■□□□ 1.32
TTC3-223ENST00000492275 HNRNPCL4P0DMR1 293 aa23.28■■□□□ 1.32
TTC3-223ENST00000492275 ARAFP10398 606 aa23.28■■□□□ 1.32
TTC3-223ENST00000492275 TPD52P55327 224 aaPredicted RBP23.28■■□□□ 1.32
TTC3-223ENST00000492275 MTPNP58546 118 aa23.28■■□□□ 1.32
TTC3-223ENST00000492275 GNA13Q14344 377 aa23.28■■□□□ 1.32
TTC3-223ENST00000492275 ADRM1Q16186 407 aa23.28■■□□□ 1.32
TTC3-223ENST00000492275 COQ5Q5HYK3 327 aa23.28■■□□□ 1.32
TTC3-223ENST00000492275 NSUN5P2Q63ZY6 315 aa23.28■■□□□ 1.32
TTC3-223ENST00000492275 REP15Q6BDI9 236 aa23.28■■□□□ 1.32
TTC3-223ENST00000492275 ADGRE4PQ86SQ3 457 aa23.28■■□□□ 1.32
TTC3-223ENST00000492275 MTDHQ86UE4 582 aaKnown RBP23.28■■□□□ 1.32
TTC3-223ENST00000492275 MED12LQ86YW9 2145 aa23.28■■□□□ 1.32
TTC3-223ENST00000492275 PEX5LQ8IYB4 626 aa23.28■■□□□ 1.32
TTC3-223ENST00000492275 WDR60Q8WVS4 1066 aa23.28■■□□□ 1.32
TTC3-223ENST00000492275 CNOT9Q92600 299 aaKnown RBP23.28■■□□□ 1.32
TTC3-223ENST00000492275 TRIB1Q96RU8 372 aa23.28■■□□□ 1.32
TTC3-223ENST00000492275 RNF6Q9Y252 685 aa23.28■■□□□ 1.32
TTC3-223ENST00000492275 AP4B1Q9Y6B7 739 aa23.28■■□□□ 1.32
TTC3-223ENST00000492275 USP9YO00507 2555 aaPredicted RBP23.28■■□□□ 1.32
TTC3-223ENST00000492275 CACNA1CQ13936 2221 aa23.27■■□□□ 1.32
TTC3-223ENST00000492275 A0A0G2JNJ9 132 aa23.27■■□□□ 1.32
TTC3-223ENST00000492275 CD8B2A6NJW9 211 aa23.27■■□□□ 1.32
TTC3-223ENST00000492275 BBIP1A8MTZ0 92 aa23.27■■□□□ 1.32
TTC3-223ENST00000492275 EFNA2O43921 213 aa23.27■■□□□ 1.32
TTC3-223ENST00000492275 ADAM11O75078 769 aa23.27■■□□□ 1.32
TTC3-223ENST00000492275 NID1P14543 1247 aa23.27■■□□□ 1.32
TTC3-223ENST00000492275 IL7RP16871 459 aa23.27■■□□□ 1.32
TTC3-223ENST00000492275 PRKCAP17252 672 aa23.27■■□□□ 1.32
TTC3-223ENST00000492275 IL11P20809 199 aa23.27■■□□□ 1.32
TTC3-223ENST00000492275 CCR4P51679 360 aa23.27■■□□□ 1.32
TTC3-223ENST00000492275 CLDN20P56880 219 aa23.27■■□□□ 1.32
TTC3-223ENST00000492275 FOXF1Q12946 379 aa23.27■■□□□ 1.32
TTC3-223ENST00000492275 CBFBQ13951 182 aa23.27■■□□□ 1.32
TTC3-223ENST00000492275 CYLC2Q14093 348 aaPredicted RBP23.27■■□□□ 1.32
TTC3-223ENST00000492275 QPRTQ15274 297 aa23.27■■□□□ 1.32
TTC3-223ENST00000492275 SF3B4Q15427 424 aaKnown RBP eCLIP23.27■■□□□ 1.324e-16■■■■■ 40.8
TTC3-223ENST00000492275 TRMT5Q32P41 509 aaKnown RBP23.27■■□□□ 1.32
TTC3-223ENST00000492275 PRAMEF8Q5VWM4 474 aa23.27■■□□□ 1.32
TTC3-223ENST00000492275 PRAMEF7Q5VXH5 474 aa23.27■■□□□ 1.32
TTC3-223ENST00000492275 VRK2Q86Y07 508 aa23.27■■□□□ 1.32
TTC3-223ENST00000492275 CCDC71Q8IV32 467 aaPredicted RBP23.27■■□□□ 1.32
TTC3-223ENST00000492275 CMIPQ8IY22 773 aa23.27■■□□□ 1.32
TTC3-223ENST00000492275 UBQLNLQ8IYU4 475 aa23.27■■□□□ 1.32
TTC3-223ENST00000492275 OR52P1PQ8NH57 321 aa23.27■■□□□ 1.32
TTC3-223ENST00000492275 FBXO27Q8NI29 283 aa23.27■■□□□ 1.32
TTC3-223ENST00000492275 NFKBIDQ8NI38 313 aa23.27■■□□□ 1.32
TTC3-223ENST00000492275 SDCCAG3Q96C92 435 aa23.27■■□□□ 1.32
TTC3-223ENST00000492275 TMEM38AQ9H6F2 299 aa23.27■■□□□ 1.32
TTC3-223ENST00000492275 CALHM2Q9HA72 323 aa23.27■■□□□ 1.32
TTC3-223ENST00000492275 Q9UFV3 132 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms