RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 MSH4O15457 936 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 GMFGO60234 142 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 HCN1O60741 890 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 SMPD2O60906 423 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 ZNF254O75437 659 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 GPX5O75715 221 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 SCGNO76038 276 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 LYPD3O95274 346 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 MBD3O95983 291 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 HSMCR30P0CW71 290 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 NPIPA8P0DM63 369 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 RNH1P13489 461 aaKnown RBP2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 PGCP20142 388 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 GABRR1P24046 479 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 CALRP27797 417 aaKnown RBP2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 PSMA5P28066 241 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 ADSSP30520 456 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 SOX6P35712 828 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 PRPHP41219 470 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 SSR1P43307 286 aaKnown RBP2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 PLA2G16P53816 162 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 MRPS11P82912 194 aaKnown RBP2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 TAF7Q15545 349 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 PDK4Q16654 411 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 USH1GQ495M9 461 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 GET4Q7L5D6 327 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 HSD17B13Q7Z5P4 300 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 ZNF677Q86XU0 584 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 FBXO16Q8IX29 292 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 SYT14Q8NB59 555 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 DENND6BQ8NEG7 585 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 CTNNBL1Q8WYA6 563 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 MRPS31Q92665 395 aaKnown RBP2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 SH3YL1Q96HL8 342 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 VSIG2Q96IQ7 327 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 C7orf34Q96L11 122 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 SENP8Q96LD8 212 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 RIT2Q99578 217 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 OMDQ99983 421 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 NICN1Q9BSH3 213 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 TUBGCP2Q9BSJ2 902 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 YTHDF1Q9BYJ9 559 aaKnown RBP2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 SLITRK2Q9H156 845 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 LIN28AQ9H9Z2 209 aaKnown RBP2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 AATFQ9NY61 560 aaKnown RBP eCLIP2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 RNF14Q9UBS8 474 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 NPIPA1Q9UND3 350 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 RPH3ALQ9UNE2 315 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 MOKQ9UQ07 419 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 GSTK1Q9Y2Q3 226 aa2.75□□□□□ -1.97
HMGB1P36-201ENST00000487709 FCN1O00602 326 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 BCAS1O75363 584 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 SCRG1O75711 98 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 KIAA0754O94854 1291 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 UFL1O94874 794 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 LALBAP00709 142 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 UGT2B4P06133 528 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 HSPA5P11021 654 aaKnown RBP2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 RPA2P15927 270 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 KIR2DS2P43631 304 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 BDKRB1P46663 353 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 DIO3P55073 304 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 PJVKQ0ZLH3 352 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 ORC2Q13416 577 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 LAGE3Q14657 143 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 LRRC36Q1X8D7 754 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 ATAD3BQ5T9A4 648 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 NCR3LG1Q68D85 454 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 TMEM225Q6GV28 225 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 WDR74Q6RFH5 385 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 CYS1Q717R9 158 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 KIAA1328Q86T90 577 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 MOB3BQ86TA1 216 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 TPRA1Q86W33 373 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 ALLCQ8N6M5 410 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 OR10H4Q8NGA5 316 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 NANPQ8TBE9 248 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 TRMT10AQ8TBZ6 339 aaKnown RBP2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 M1APQ8TC57 530 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 DNAJA4Q8WW22 397 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 RLN3Q8WXF3 142 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 MARC2Q969Z3 335 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 SLC25A38Q96DW6 304 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 PHYHIPLQ96FC7 376 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 ALG12Q9BV10 488 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 NMUR2Q9GZQ4 415 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 NAT10Q9H0A0 1025 aaKnown RBP2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 SMYD3Q9H7B4 428 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 FANCFQ9NPI8 374 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 Q9UF83 564 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 XPO7Q9UIA9 1087 aaKnown RBP2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 COPS3Q9UNS2 423 aa2.74□□□□□ -1.97
HMGB1P36-201ENST00000487709 ZFP92A6NM28 416 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 TRIM49D1C9J1S8 452 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 H3BMQ9 156 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 HIP1O00291 1037 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 MAGEB3O15480 346 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 BBOX1O75936 387 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 SEMG1P04279 462 aa2.73□□□□□ -1.97
HMGB1P36-201ENST00000487709 HSPB1P04792 205 aaKnown RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms