RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 KLHL26Q53HC5 615 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 RIPPLY2Q5TAB7 128 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 NSUN5P2Q63ZY6 315 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 TYW3Q6IPR3 259 aaKnown RBP9.23□□□□□ -0.93
NEK4-204ENST00000487068 HEPHL1Q6MZM0 1159 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 POMZP3Q6PJE2 187 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 BLOC1S3Q6QNY0 202 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 CBLN3Q6UW01 205 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 PLXDC2Q6UX71 529 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 FRRS1Q6ZNA5 592 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 EIF3MQ7L2H7 374 aaKnown RBP9.23□□□□□ -0.93
NEK4-204ENST00000487068 GCNT2Q8N0V5 402 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 ANKFN1Q8N957 763 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 ATP6V1C2Q8NEY4 427 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 TNIP2Q8NFZ5 429 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 ZNF563Q8TA94 476 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 WDR60Q8WVS4 1066 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 GTF2H4Q92759 462 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 LRRC46Q96FV0 321 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 PINK1Q9BXM7 581 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 PRRG4Q9BZD6 226 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 UCK2Q9BZX2 261 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 QRSL1Q9H0R6 528 aaKnown RBP9.23□□□□□ -0.93
NEK4-204ENST00000487068 KCNJ16Q9NPI9 418 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 LEF1Q9UJU2 399 aaPredicted RBP9.23□□□□□ -0.93
NEK4-204ENST00000487068 LIPT1Q9Y234 373 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 ZNF337Q9Y3M9 751 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 PCDHB14Q9Y5E9 798 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 CD8B2A6NJW9 211 aa9.22□□□□□ -0.93
NEK4-204ENST00000487068 SLC22A20A6NK97 555 aa9.22□□□□□ -0.93
NEK4-204ENST00000487068 CLIC1O00299 241 aa9.22□□□□□ -0.93
NEK4-204ENST00000487068 OIP5O43482 229 aa9.22□□□□□ -0.93
NEK4-204ENST00000487068 EIF4E2O60573 245 aaKnown RBP9.22□□□□□ -0.93
NEK4-204ENST00000487068 OPN1LWP04000 364 aa9.22□□□□□ -0.93
NEK4-204ENST00000487068 CHRM4P08173 479 aa9.22□□□□□ -0.93
NEK4-204ENST00000487068 TMIGD3P0DMS9 266 aaPredicted RBP9.22□□□□□ -0.93
NEK4-204ENST00000487068 PPIBP23284 216 aaKnown RBP9.22□□□□□ -0.93
NEK4-204ENST00000487068 RYKP34925 604 aa9.22□□□□□ -0.93
NEK4-204ENST00000487068 SFTPDP35247 375 aa9.22□□□□□ -0.93
NEK4-204ENST00000487068 MDH1P40925 334 aaKnown RBP9.22□□□□□ -0.93
NEK4-204ENST00000487068 EIF1AXP47813 144 aaKnown RBP9.22□□□□□ -0.93
NEK4-204ENST00000487068 MRPL19P49406 292 aaKnown RBP9.22□□□□□ -0.93
NEK4-204ENST00000487068 AGFG1P52594 562 aaKnown RBP9.22□□□□□ -0.93
NEK4-204ENST00000487068 CLDN18P56856 261 aa9.22□□□□□ -0.93
NEK4-204ENST00000487068 B3GALT5-AS1P59052 145 aa9.22□□□□□ -0.93
NEK4-204ENST00000487068 CHRNEQ04844 493 aa9.22□□□□□ -0.93
NEK4-204ENST00000487068 NFYCQ13952 458 aa9.22□□□□□ -0.93
NEK4-204ENST00000487068 ZNF141Q15928 474 aa9.22□□□□□ -0.93
NEK4-204ENST00000487068 GLYR1Q49A26 553 aaPredicted RBP9.22□□□□□ -0.93
NEK4-204ENST00000487068 RPS26P11Q5JNZ5 115 aaPredicted RBP9.22□□□□□ -0.93
NEK4-204ENST00000487068 DHDDSQ86SQ9 333 aa9.22□□□□□ -0.93
NEK4-204ENST00000487068 FUNDC1Q8IVP5 155 aa9.22□□□□□ -0.93
NEK4-204ENST00000487068 PEX5LQ8IYB4 626 aa9.22□□□□□ -0.93
NEK4-204ENST00000487068 ZPLD1Q8TCW7 415 aa9.22□□□□□ -0.93
NEK4-204ENST00000487068 STON2Q8WXE9 905 aa9.22□□□□□ -0.93
NEK4-204ENST00000487068 ARSGQ96EG1 525 aa9.22□□□□□ -0.93
NEK4-204ENST00000487068 TRNT1Q96Q11 434 aaKnown RBP9.22□□□□□ -0.93
NEK4-204ENST00000487068 TM9SF2Q99805 663 aa9.22□□□□□ -0.93
NEK4-204ENST00000487068 PAIP1Q9H074 479 aaKnown RBP9.22□□□□□ -0.93
NEK4-204ENST00000487068 FAM107BQ9H098 131 aa9.22□□□□□ -0.93
NEK4-204ENST00000487068 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.22□□□□□ -0.93
NEK4-204ENST00000487068 THUMPD1Q9NXG2 353 aaKnown RBP9.22□□□□□ -0.93
NEK4-204ENST00000487068 CALML5Q9NZT1 146 aa9.22□□□□□ -0.93
NEK4-204ENST00000487068 CORO2BQ9UQ03 480 aa9.22□□□□□ -0.93
NEK4-204ENST00000487068 SLC35A3Q9Y2D2 325 aa9.22□□□□□ -0.93
NEK4-204ENST00000487068 NDUFAF1Q9Y375 327 aa9.22□□□□□ -0.93
NEK4-204ENST00000487068 AP4B1Q9Y6B7 739 aa9.22□□□□□ -0.93
NEK4-204ENST00000487068 ANKRD17O75179 2603 aaKnown RBP9.22□□□□□ -0.93
NEK4-204ENST00000487068 CENPEQ02224 2701 aa9.22□□□□□ -0.93
NEK4-204ENST00000487068 CSMD1Q96PZ7 3565 aa9.22□□□□□ -0.93
NEK4-204ENST00000487068 LRBAP50851 2863 aa9.21□□□□□ -0.93
NEK4-204ENST00000487068 A0A1W2PP18 115 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 MBD3L4A6NDZ8 208 aaPredicted RBP9.21□□□□□ -0.94
NEK4-204ENST00000487068 MBD3L3A6NE82 208 aaPredicted RBP9.21□□□□□ -0.94
NEK4-204ENST00000487068 MBD3L5A6NJ08 208 aaPredicted RBP9.21□□□□□ -0.94
NEK4-204ENST00000487068 EVPLLA8MZ36 301 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 NPIPB9F8W1W9 429 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 H0YC42 278 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 TNFSF11O14788 317 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 PLGP00747 810 aaPredicted RBP9.21□□□□□ -0.94
NEK4-204ENST00000487068 DBIP07108 87 aaKnown RBP9.21□□□□□ -0.94
NEK4-204ENST00000487068 FCGR2AP12318 317 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 PRF1P14222 555 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 UQCRBP14927 111 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 PGCP20142 388 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 ELK4P28324 431 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 SLC7A1P30825 629 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 TIMP3P35625 211 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 EIF1P41567 113 aaKnown RBP9.21□□□□□ -0.94
NEK4-204ENST00000487068 MAGEA8P43361 318 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 CPA2P48052 419 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 TPD52P55327 224 aaPredicted RBP9.21□□□□□ -0.94
NEK4-204ENST00000487068 CLDN20P56880 219 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 FADDQ13158 208 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 FGFBP1Q14512 234 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 PON3Q15166 354 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 QPRTQ15274 297 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 RGNQ15493 299 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 SLC25A35Q3KQZ1 300 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 MMEL1Q495T6 779 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms