RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 PTX3P26022 381 aaPredicted RBP9.93□□□□□ -0.82
DDX56-212ENST00000485367 HTR6P50406 440 aa9.93□□□□□ -0.82
DDX56-212ENST00000485367 B2MP61769 119 aa9.93□□□□□ -0.82
DDX56-212ENST00000485367 RPL38P63173 70 aaKnown RBP9.93□□□□□ -0.82
DDX56-212ENST00000485367 RPP38P78345 283 aaKnown RBP9.93□□□□□ -0.82
DDX56-212ENST00000485367 BTG2P78543 158 aa9.93□□□□□ -0.82
DDX56-212ENST00000485367 GTF2H2Q13888 395 aa9.93□□□□□ -0.82
DDX56-212ENST00000485367 ACER2Q5QJU3 275 aa9.93□□□□□ -0.82
DDX56-212ENST00000485367 RPUSD3Q6P087 351 aaKnown RBP9.93□□□□□ -0.82
DDX56-212ENST00000485367 GTF2H2CQ6P1K8 395 aa9.93□□□□□ -0.82
DDX56-212ENST00000485367 ZNF367Q7RTV3 350 aa9.93□□□□□ -0.82
DDX56-212ENST00000485367 GOLGA7Q7Z5G4 137 aa9.93□□□□□ -0.82
DDX56-212ENST00000485367 KRT73Q86Y46 540 aa9.93□□□□□ -0.82
DDX56-212ENST00000485367 LIX1LQ8IVB5 337 aa9.93□□□□□ -0.82
DDX56-212ENST00000485367 ENTHD1Q8IYW4 607 aa9.93□□□□□ -0.82
DDX56-212ENST00000485367 CA13Q8N1Q1 262 aa9.93□□□□□ -0.82
DDX56-212ENST00000485367 ST6GALNAC3Q8NDV1 305 aa9.93□□□□□ -0.82
DDX56-212ENST00000485367 TTLQ8NG68 377 aa9.93□□□□□ -0.82
DDX56-212ENST00000485367 OR4F6Q8NGB9 312 aa9.93□□□□□ -0.82
DDX56-212ENST00000485367 M1APQ8TC57 530 aa9.93□□□□□ -0.82
DDX56-212ENST00000485367 APH1BQ8WW43 257 aa9.93□□□□□ -0.82
DDX56-212ENST00000485367 CEP19Q96LK0 163 aa9.93□□□□□ -0.82
DDX56-212ENST00000485367 ZNF354BQ96LW1 612 aa9.93□□□□□ -0.82
DDX56-212ENST00000485367 OR52E6Q96RD3 313 aa9.93□□□□□ -0.82
DDX56-212ENST00000485367 EPYCQ99645 322 aa9.93□□□□□ -0.82
DDX56-212ENST00000485367 TMEM246Q9BRR3 403 aa9.93□□□□□ -0.82
DDX56-212ENST00000485367 NT5DC2Q9H857 520 aa9.93□□□□□ -0.82
DDX56-212ENST00000485367 REEP1Q9H902 201 aa9.93□□□□□ -0.82
DDX56-212ENST00000485367 PRM3Q9NNZ6 103 aa9.93□□□□□ -0.82
DDX56-212ENST00000485367 PDP1Q9P0J1 537 aaPredicted RBP9.93□□□□□ -0.82
DDX56-212ENST00000485367 LRIT2A6NDA9 550 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 OR5H15A6NDH6 313 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 ANKDD1BA6NHY2 528 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 SNTNA6NMZ2 147 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 FAM25EA8MYX2 175 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 OR7A17O14581 309 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 ERI3O43414 337 aaKnown RBP9.92□□□□□ -0.82
DDX56-212ENST00000485367 PRAMEF4O60810 478 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 PRAMEF2O60811 474 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 TMCC2O75069 709 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 TRIM3O75382 744 aaPredicted RBP9.92□□□□□ -0.82
DDX56-212ENST00000485367 RNF224P0DH78 156 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 CYP4B1P13584 511 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 FOSL1P15407 271 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 HOXB9P17482 250 aaPredicted RBP9.92□□□□□ -0.82
DDX56-212ENST00000485367 MAOAP21397 527 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 SLC26A5P58743 744 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 CSTF3Q12996 717 aaKnown RBP9.92□□□□□ -0.82
DDX56-212ENST00000485367 DOC2AQ14183 400 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 SMN1Q16637 294 aaKnown RBP9.92□□□□□ -0.82
DDX56-212ENST00000485367 YIF1BQ5BJH7 314 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 SPANXN4Q5MJ08 99 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 PRAMEF9Q5VWM5 478 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 MILR1Q7Z6M3 343 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 ELMOD2Q8IZ81 293 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 BEST3Q8N1M1 668 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 DEPDC4Q8N2C3 294 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 BCORP1Q8N888 145 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 ATG16L2Q8NAA4 619 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 PSD4Q8NDX1 1056 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 SUN3Q8TAQ9 357 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 ZNF675Q8TD23 568 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 GAL3ST3Q96A11 431 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 MS4A6EQ96DS6 147 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 SPATA9Q9BWV2 254 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 CD244Q9BZW8 370 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 RNF32Q9H0A6 362 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 RACGAP1Q9H0H5 632 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 MMP25Q9NPA2 562 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 TRPS1Q9UHF7 1281 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 ERRFI1Q9UJM3 462 aaPredicted RBP9.92□□□□□ -0.82
DDX56-212ENST00000485367 ZNF490Q9ULM2 529 aaPredicted RBP9.92□□□□□ -0.82
DDX56-212ENST00000485367 SAMHD1Q9Y3Z3 626 aaKnown RBP9.92□□□□□ -0.82
DDX56-212ENST00000485367 SPEF1Q9Y4P9 236 aa9.92□□□□□ -0.82
DDX56-212ENST00000485367 A8MUA0 341 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 A8MVJ9 347 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 BET1O15155 118 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 CLEC3AO75596 197 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 PRPS2P11908 318 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 EDN3P14138 238 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 GGT2P36268 569 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 TGFBR1P36897 503 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 ALDH9A1P49189 494 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 RGS6P49758 472 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 TAS2R50P59544 299 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 IL1RL1Q01638 556 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 IRF8Q02556 426 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 PPP1R8Q12972 351 aaKnown RBP9.91□□□□□ -0.82
DDX56-212ENST00000485367 CHIT1Q13231 466 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 RUNX2Q13950 521 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 ARMCX4Q5H9R4 360 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 TIGD3Q6B0B8 471 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 HIST2H2AA3Q6FI13 130 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 ADNP2Q6IQ32 1131 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 H3F3CQ6NXT2 135 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 GDPGP1Q6ZNW5 385 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 QSOX2Q6ZRP7 698 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 EIF3MQ7L2H7 374 aaKnown RBP9.91□□□□□ -0.82
DDX56-212ENST00000485367 LRRC70Q7Z2Q7 622 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 NOXA1Q86UR1 476 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms