RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 MYH4Q9Y623 1939 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 MYO18AQ92614 2054 aaKnown RBP8.87□□□□□ -0.99
GARNL3-216ENST00000481242 TCRBV5S1A1TA0A578 114 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 ANKRD30BLA7E2S9 258 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 CLCA1A8K7I4 914 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 KLRC4-KLRK1H3BQV0 150 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 H7C417 338 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 EIF1BO60739 113 aaKnown RBP8.87□□□□□ -0.99
GARNL3-216ENST00000481242 ARAFP10398 606 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 GNRHRP30968 328 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 RPL34P49207 117 aaKnown RBP8.87□□□□□ -0.99
GARNL3-216ENST00000481242 GNMTQ14749 295 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 SLC5A12Q1EHB4 618 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 METRNLQ641Q3 311 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 CGB2Q6NT52 195 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 ARSKQ6UWY0 536 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 SSX6Q7RTT6 188 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 KLBQ86Z14 1044 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 NLGN4XQ8N0W4 816 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 SLC43A2Q8N370 569 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 ESX1Q8N693 406 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 ZNF611Q8N823 705 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 FRS2Q8WU20 508 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 MAL2Q969L2 176 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 SAMD8Q96LT4 415 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 RANBP3Q9H6Z4 567 aaPredicted RBP8.87□□□□□ -0.99
GARNL3-216ENST00000481242 ZNF701Q9NV72 531 aaPredicted RBP8.87□□□□□ -0.99
GARNL3-216ENST00000481242 ABRACLQ9P1F3 81 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 TMEM181Q9P2C4 612 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 UBQLN2Q9UHD9 624 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 ALG5Q9Y673 324 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 A6NL46 340 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 J3QRK9 145 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 GMDSO60547 372 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 WDPCPO95876 746 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 ZNF16P17020 682 aaPredicted RBP8.87□□□□□ -0.99
GARNL3-216ENST00000481242 AMY2BP19961 511 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 CNR2P34972 360 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 HTR2BP41595 481 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 PITPNBP48739 271 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 ADPRHP54922 357 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 GPR18Q14330 331 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 PTPRRQ15256 657 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 RSPO2Q6UXX9 243 aaPredicted RBP8.87□□□□□ -0.99
GARNL3-216ENST00000481242 DNAAF1Q8NEP3 725 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 NETO1Q8TDF5 533 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 OR7D2Q96RA2 312 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 WDR83Q9BRX9 315 aaKnown RBP8.87□□□□□ -0.99
GARNL3-216ENST00000481242 INPP5KQ9BT40 448 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 MS4A8Q9BY19 250 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 PRDM9Q9NQV7 894 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 PLEK2Q9NYT0 353 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 KCMF1Q9P0J7 381 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 CXXC1Q9P0U4 656 aaPredicted RBP8.87□□□□□ -0.99
GARNL3-216ENST00000481242 COPZ2Q9P299 210 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 ERVK-18Q9QC07 812 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 ZNF69Q9UC07 566 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 EMC9Q9Y3B6 208 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 AIFM1O95831 613 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 ITGB2P05107 769 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 TMEM225BP0DP42 221 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 GTF2F2P13984 249 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 PRKXP51817 358 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 PGGT1BP53609 377 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 PIN1Q13526 163 aaPredicted RBP8.87□□□□□ -0.99
GARNL3-216ENST00000481242 ATAD3CQ5T2N8 411 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 HENMT1Q5T8I9 393 aaKnown RBP8.87□□□□□ -0.99
GARNL3-216ENST00000481242 RTL6Q6ICC9 239 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 PAPD4Q6PIY7 484 aaKnown RBP8.87□□□□□ -0.99
GARNL3-216ENST00000481242 CMIPQ8IY22 773 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 PGBD5Q8N414 524 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 OR13H1Q8NG92 308 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 OR1J2Q8NGS2 313 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 CDS1Q92903 461 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 VAPAQ9P0L0 249 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 PAPPA2Q9BXP8 1791 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 AKAP11Q9UKA4 1901 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 NUMA1Q14980 2115 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 BORCS7-ASMTA0A0B4J1R7 106 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 A0A1B0GX78 115 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 RAB3BP20337 219 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 SPRED3Q2MJR0 410 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 RNASE10Q5GAN6 216 aaKnown RBP8.87□□□□□ -0.99
GARNL3-216ENST00000481242 PAGE3Q5JUK9 113 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 C1orf53Q5VUE5 145 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 WDR20Q8TBZ3 569 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 ASB17Q8WXJ9 295 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 GCDHQ92947 438 aaPredicted RBP8.87□□□□□ -0.99
GARNL3-216ENST00000481242 TRIM43Q96BQ3 446 aaPredicted RBP8.87□□□□□ -0.99
GARNL3-216ENST00000481242 FOXRED1Q96CU9 486 aaPredicted RBP8.87□□□□□ -0.99
GARNL3-216ENST00000481242 LCORQ96JN0 433 aaPredicted RBP8.87□□□□□ -0.99
GARNL3-216ENST00000481242 OR6C1Q96RD1 312 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 INTS14Q96SY0 518 aa8.87□□□□□ -0.99
GARNL3-216ENST00000481242 VRK1Q99986 396 aaPredicted RBP8.87□□□□□ -0.99
GARNL3-216ENST00000481242 FARSAQ9Y285 508 aaKnown RBP8.87□□□□□ -0.99
GARNL3-216ENST00000481242 CACNA1SQ13698 1873 aa8.86□□□□□ -0.99
GARNL3-216ENST00000481242 M0R3H8 397 aa8.86□□□□□ -0.99
GARNL3-216ENST00000481242 SLC43A1O75387 559 aa8.86□□□□□ -0.99
GARNL3-216ENST00000481242 MRPL33O75394 65 aaKnown RBP8.86□□□□□ -0.99
GARNL3-216ENST00000481242 PPP1R3DO95685 299 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms