RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 ANPEPP15144 967 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 ATP6V1C1P21283 382 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 LCN1P31025 176 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 PRKAR1BP31321 381 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 DCTP40126 519 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 RFX3P48380 749 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 KCNJ5P48544 419 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 NR0B1P51843 470 aaKnown RBP6.11□□□□□ -1.43
USP48-208ENST00000479177 SELENOWP63302 87 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 KCNJ10P78508 379 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 SRSF3P84103 164 aaKnown RBP6.11□□□□□ -1.43
USP48-208ENST00000479177 VLDLRP98155 873 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 CHRNB3Q05901 458 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 PLCXD2Q0VAA5 305 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 ATP1A4Q13733 1029 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 TGIF1Q15583 401 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 MAPK14Q16539 360 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 DECR1Q16698 335 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 BTBD16Q32M84 506 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 TBC1D25Q3MII6 688 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 IQCCQ4KMZ1 466 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 FLYWCH1Q4VC44 716 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 LIN52Q52LA3 116 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 IFI44LQ53G44 452 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 HMBOX1Q6NT76 420 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 ZNF836Q6ZNA1 936 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 VASH2Q86V25 355 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 PEX5LQ8IYB4 626 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 PQLC1Q8N2U9 271 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 SMYD1Q8NB12 490 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 GEMIN6Q8WXD5 167 aaKnown RBP6.11□□□□□ -1.43
USP48-208ENST00000479177 LZICQ8WZA0 190 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 TMBIM1Q969X1 311 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 KIAA1143Q96AT1 154 aaPredicted RBP6.11□□□□□ -1.43
USP48-208ENST00000479177 ZG16BQ96DA0 208 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 HSPBAP1Q96EW2 488 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 TPD52L3Q96J77 140 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 C7orf34Q96L11 122 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 SEPHS2Q99611 448 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 ARHGDIGQ99819 225 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 PKP2Q99959 881 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 EFHD1Q9BUP0 239 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 SPATA5L1Q9BVQ7 753 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 CHID1Q9BWS9 393 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 PINK1Q9BXM7 581 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 UGT2B28Q9BY64 529 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 GPN2Q9H9Y4 310 aaPredicted RBP6.11□□□□□ -1.43
USP48-208ENST00000479177 ZNF160Q9HCG1 818 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 AGPAT4Q9NRZ5 378 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 P4HTMQ9NXG6 502 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 SEC14L3Q9UDX4 400 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 TMEFF2Q9UIK5 374 aaPredicted RBP6.11□□□□□ -1.43
USP48-208ENST00000479177 KCNE5Q9UJ90 142 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 BAG5Q9UL15 447 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 MKLN1Q9UL63 735 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 ZNF443Q9Y2A4 671 aaPredicted RBP6.11□□□□□ -1.43
USP48-208ENST00000479177 WDFY3Q8IZQ1 3526 aa6.11□□□□□ -1.43
USP48-208ENST00000479177 TLN1Q9Y490 2541 aaKnown RBP6.1□□□□□ -1.43
USP48-208ENST00000479177 C7orf72A4D263 438 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 hCG_2039718K7EN88 272 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 MASP2O00187 686 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 HNRNPRO43390 633 aaKnown RBP6.1□□□□□ -1.43
USP48-208ENST00000479177 TSPAN2O60636 221 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 ZNF354AO60765 605 aaPredicted RBP6.1□□□□□ -1.43
USP48-208ENST00000479177 UGT2B17O75795 530 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 UTS2O95399 124 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 FABP3P05413 133 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 SERPINA7P05543 415 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 DBIP07108 87 aaKnown RBP6.1□□□□□ -1.43
USP48-208ENST00000479177 FESP07332 822 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 NGFRP08138 427 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 ITGAMP11215 1152 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 CYP4B1P13584 511 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 TNFRSF1BP20333 461 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 ABCD3P28288 659 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 ECI1P42126 302 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 PSMD4P55036 377 aaKnown RBP6.1□□□□□ -1.43
USP48-208ENST00000479177 SESN3P58005 492 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 EEF1A1P68104 462 aaKnown RBP6.1□□□□□ -1.43
USP48-208ENST00000479177 SLC34A1Q06495 639 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 Q0VFX4 171 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 CHAF1BQ13112 559 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 SRSF6Q13247 344 aaKnown RBP6.1□□□□□ -1.43
USP48-208ENST00000479177 PUM1Q14671 1186 aaKnown RBP eCLIP6.1□□□□□ -1.43
USP48-208ENST00000479177 GPR68Q15743 365 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 ATP6AP1Q15904 470 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 ZNF141Q15928 474 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 SNCBQ16143 134 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 NRF1Q16656 503 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 DUSP7Q16829 419 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 GRAMD1BQ3KR37 738 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 GLIPR1L2Q4G1C9 344 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 EIPR1Q53HC9 387 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 PDZK1Q5T2W1 519 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 RNF220Q5VTB9 566 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 BICRALQ6AI39 1079 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 TCTN3Q6NUS6 607 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 POMZP3Q6PJE2 187 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 RPTNQ6XPR3 784 aa6.1□□□□□ -1.43
USP48-208ENST00000479177 C16orf47Q6ZP98 133 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms