RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 IGHV3-15A0A0B4J1V0 119 aa17.82■□□□□ 0.44
PDLIM1-202ENST00000477757 ESYT3A0FGR9 886 aa17.82■□□□□ 0.44
PDLIM1-202ENST00000477757 ZSCAN12O43309 604 aa17.82■□□□□ 0.44
PDLIM1-202ENST00000477757 HPGDP15428 266 aa17.82■□□□□ 0.44
PDLIM1-202ENST00000477757 LCN1P31025 176 aa17.82■□□□□ 0.44
PDLIM1-202ENST00000477757 PAFAH1B1P43034 410 aa17.82■□□□□ 0.44
PDLIM1-202ENST00000477757 PDLIM4P50479 330 aa17.82■□□□□ 0.44
PDLIM1-202ENST00000477757 ZNF83P51522 516 aa17.82■□□□□ 0.44
PDLIM1-202ENST00000477757 PLTPP55058 493 aa17.82■□□□□ 0.44
PDLIM1-202ENST00000477757 CR1LQ2VPA4 569 aa17.82■□□□□ 0.44
PDLIM1-202ENST00000477757 TMEM176BQ3YBM2 270 aaPredicted RBP17.82■□□□□ 0.44
PDLIM1-202ENST00000477757 KLHL17Q6TDP4 642 aa17.82■□□□□ 0.44
PDLIM1-202ENST00000477757 ZNF433Q8N7K0 673 aaPredicted RBP17.82■□□□□ 0.44
PDLIM1-202ENST00000477757 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.82■□□□□ 0.44
PDLIM1-202ENST00000477757 OR6Y1Q8NGX8 325 aa17.82■□□□□ 0.44
PDLIM1-202ENST00000477757 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.82■□□□□ 0.44
PDLIM1-202ENST00000477757 FBXO25Q8TCJ0 367 aa17.82■□□□□ 0.44
PDLIM1-202ENST00000477757 MRPL57Q9BQC6 102 aaKnown RBP17.82■□□□□ 0.44
PDLIM1-202ENST00000477757 INPP5KQ9BT40 448 aa17.82■□□□□ 0.44
PDLIM1-202ENST00000477757 MYNNQ9NPC7 610 aa17.82■□□□□ 0.44
PDLIM1-202ENST00000477757 UBQLN4Q9NRR5 601 aa17.82■□□□□ 0.44
PDLIM1-202ENST00000477757 SAR1BQ9Y6B6 198 aa17.82■□□□□ 0.44
PDLIM1-202ENST00000477757 IGHV4-61A0A0C4DH41 118 aa17.81■□□□□ 0.44
PDLIM1-202ENST00000477757 SCDO00767 359 aa17.81■□□□□ 0.44
PDLIM1-202ENST00000477757 ZNF195O14628 629 aa17.81■□□□□ 0.44
PDLIM1-202ENST00000477757 RAD51CO43502 376 aa17.81■□□□□ 0.44
PDLIM1-202ENST00000477757 SBK3P0C264 359 aa17.81■□□□□ 0.44
PDLIM1-202ENST00000477757 PRPS2P11908 318 aa17.81■□□□□ 0.44
PDLIM1-202ENST00000477757 HMOX2P30519 316 aa17.81■□□□□ 0.44
PDLIM1-202ENST00000477757 CAV1Q03135 178 aa17.81■□□□□ 0.44
PDLIM1-202ENST00000477757 ZNF117Q03924 483 aa17.81■□□□□ 0.44
PDLIM1-202ENST00000477757 CHRNB3Q05901 458 aa17.81■□□□□ 0.44
PDLIM1-202ENST00000477757 GPRIN3Q6ZVF9 776 aa17.81■□□□□ 0.44
PDLIM1-202ENST00000477757 DEPDC4Q8N2C3 294 aa17.81■□□□□ 0.44
PDLIM1-202ENST00000477757 CDRT4Q8N9R6 151 aa17.81■□□□□ 0.44
PDLIM1-202ENST00000477757 FBXO27Q8NI29 283 aa17.81■□□□□ 0.44
PDLIM1-202ENST00000477757 METTL6Q8TCB7 284 aa17.81■□□□□ 0.44
PDLIM1-202ENST00000477757 SLC25A15Q9Y619 301 aa17.81■□□□□ 0.44
PDLIM1-202ENST00000477757 FKBP7Q9Y680 259 aa17.81■□□□□ 0.44
PDLIM1-202ENST00000477757 ZNF724A8MTY0 619 aa17.8■□□□□ 0.44
PDLIM1-202ENST00000477757 SMAD9O15198 467 aaKnown RBP17.8■□□□□ 0.44
PDLIM1-202ENST00000477757 KCNAB3O43448 404 aa17.8■□□□□ 0.44
PDLIM1-202ENST00000477757 RAD51DO75771 328 aa17.8■□□□□ 0.44
PDLIM1-202ENST00000477757 KCNK2O95069 426 aa17.8■□□□□ 0.44
PDLIM1-202ENST00000477757 TGFAP01135 160 aa17.8■□□□□ 0.44
PDLIM1-202ENST00000477757 RAC3P60763 192 aa17.8■□□□□ 0.44
PDLIM1-202ENST00000477757 TRADDQ15628 312 aa17.8■□□□□ 0.44
PDLIM1-202ENST00000477757 OR52N5Q8NH56 324 aa17.8■□□□□ 0.44
PDLIM1-202ENST00000477757 ZNF75CPQ92670 426 aaPredicted RBP17.8■□□□□ 0.44
PDLIM1-202ENST00000477757 C3orf49Q96BT1 292 aa17.8■□□□□ 0.44
PDLIM1-202ENST00000477757 ZNF300Q96RE9 604 aaPredicted RBP17.8■□□□□ 0.44
PDLIM1-202ENST00000477757 ACTL7BQ9Y614 415 aa17.8■□□□□ 0.44
PDLIM1-202ENST00000477757 GPC6Q9Y625 555 aaPredicted RBP17.8■□□□□ 0.44
PDLIM1-202ENST00000477757 PMF1-BGLAPU3KQ54 211 aa17.8■□□□□ 0.44
PDLIM1-202ENST00000477757 CYTIPO60759 359 aa17.79■□□□□ 0.44
PDLIM1-202ENST00000477757 ACP2P11117 423 aa17.79■□□□□ 0.44
PDLIM1-202ENST00000477757 SLC7A1P30825 629 aa17.79■□□□□ 0.44
PDLIM1-202ENST00000477757 SUMO3P55854 103 aaPredicted RBP17.79■□□□□ 0.44
PDLIM1-202ENST00000477757 BTKQ06187 659 aa17.79■□□□□ 0.44
PDLIM1-202ENST00000477757 RASGEF1BQ0VAM2 473 aa17.79■□□□□ 0.44
PDLIM1-202ENST00000477757 HSPB3Q12988 150 aa17.79■□□□□ 0.44
PDLIM1-202ENST00000477757 SELENBP1Q13228 472 aa17.79■□□□□ 0.44
PDLIM1-202ENST00000477757 BHLHB9Q6PI77 547 aa17.79■□□□□ 0.44
PDLIM1-202ENST00000477757 ZDHHC24Q6UX98 284 aa17.79■□□□□ 0.44
PDLIM1-202ENST00000477757 ZNF551Q7Z340 670 aaPredicted RBP17.79■□□□□ 0.44
PDLIM1-202ENST00000477757 ZNF100Q8IYN0 542 aa17.79■□□□□ 0.44
PDLIM1-202ENST00000477757 TMEM151AQ8N4L1 468 aa17.79■□□□□ 0.44
PDLIM1-202ENST00000477757 FBXO30Q8TB52 745 aa17.79■□□□□ 0.44
PDLIM1-202ENST00000477757 C12orf65Q9H3J6 166 aaKnown RBP17.79■□□□□ 0.44
PDLIM1-202ENST00000477757 WBP11Q9Y2W2 641 aaKnown RBP17.79■□□□□ 0.44
PDLIM1-202ENST00000477757 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.78■□□□□ 0.44
PDLIM1-202ENST00000477757 M0R1B8 84 aa17.78■□□□□ 0.44
PDLIM1-202ENST00000477757 SUPT7LO94864 414 aa17.78■□□□□ 0.44
PDLIM1-202ENST00000477757 ZNF23P17027 643 aa17.78■□□□□ 0.44
PDLIM1-202ENST00000477757 CHRNEQ04844 493 aa17.78■□□□□ 0.44
PDLIM1-202ENST00000477757 DUSP5Q16690 384 aa17.78■□□□□ 0.44
PDLIM1-202ENST00000477757 IKBIPQ70UQ0 350 aa17.78■□□□□ 0.44
PDLIM1-202ENST00000477757 GALNT5Q7Z7M9 940 aa17.78■□□□□ 0.44
PDLIM1-202ENST00000477757 SLC16A11Q8NCK7 471 aa17.78■□□□□ 0.44
PDLIM1-202ENST00000477757 ZMYND19Q96E35 227 aaPredicted RBP17.78■□□□□ 0.44
PDLIM1-202ENST00000477757 GIMAP5Q96F15 307 aa17.78■□□□□ 0.44
PDLIM1-202ENST00000477757 MS4A4EQ96PG1 132 aa17.78■□□□□ 0.44
PDLIM1-202ENST00000477757 ACSS3Q9H6R3 686 aa17.78■□□□□ 0.44
PDLIM1-202ENST00000477757 NTMQ9P121 344 aa17.78■□□□□ 0.44
PDLIM1-202ENST00000477757 ICAM5Q9UMF0 924 aa17.78■□□□□ 0.44
PDLIM1-202ENST00000477757 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.78■□□□□ 0.449e-9■□□□□ 9.6
PDLIM1-202ENST00000477757 PKD1L1Q8TDX9 2849 aa17.78■□□□□ 0.44
PDLIM1-202ENST00000477757 TGP01266 2768 aa17.78■□□□□ 0.44
PDLIM1-202ENST00000477757 A0A1W2PNR3 127 aa17.77■□□□□ 0.44
PDLIM1-202ENST00000477757 SERTM1A2A2V5 107 aa17.77■□□□□ 0.44
PDLIM1-202ENST00000477757 C9JVG2 144 aa17.77■□□□□ 0.44
PDLIM1-202ENST00000477757 OIP5O43482 229 aa17.77■□□□□ 0.44
PDLIM1-202ENST00000477757 NUDT14O95848 222 aa17.77■□□□□ 0.44
PDLIM1-202ENST00000477757 ENO1P06733 434 aaKnown RBP17.77■□□□□ 0.44
PDLIM1-202ENST00000477757 PRKCAP17252 672 aa17.77■□□□□ 0.44
PDLIM1-202ENST00000477757 UNC50Q53HI1 259 aa17.77■□□□□ 0.44
PDLIM1-202ENST00000477757 SPDYAQ5MJ70 313 aa17.77■□□□□ 0.44
PDLIM1-202ENST00000477757 ZNF678Q5SXM1 525 aa17.77■□□□□ 0.44
PDLIM1-202ENST00000477757 FBXW9Q5XUX1 488 aa17.77■□□□□ 0.44
PDLIM1-202ENST00000477757 CBLN3Q6UW01 205 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms