RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 CSRP1P21291 193 aaKnown RBP13.24□□□□□ -0.29
COL4A6-206ENST00000477085 KRT20P35900 424 aa13.24□□□□□ -0.29
COL4A6-206ENST00000477085 ZSWIM7Q19AV6 140 aa13.24□□□□□ -0.29
COL4A6-206ENST00000477085 PLAG1Q6DJT9 500 aa13.24□□□□□ -0.29
COL4A6-206ENST00000477085 ZNF613Q6PF04 617 aa13.24□□□□□ -0.29
COL4A6-206ENST00000477085 CD300LDQ6UXZ3 194 aa13.24□□□□□ -0.29
COL4A6-206ENST00000477085 ZNF730Q6ZMV8 503 aa13.24□□□□□ -0.29
COL4A6-206ENST00000477085 MBOAT2Q6ZWT7 520 aa13.24□□□□□ -0.29
COL4A6-206ENST00000477085 ZNF550Q7Z398 422 aa13.24□□□□□ -0.29
COL4A6-206ENST00000477085 ZNF786Q8N393 782 aa13.24□□□□□ -0.29
COL4A6-206ENST00000477085 OR5L2Q8NGL0 311 aa13.24□□□□□ -0.29
COL4A6-206ENST00000477085 OR5M3Q8NGP4 307 aa13.24□□□□□ -0.29
COL4A6-206ENST00000477085 OIT3Q8WWZ8 545 aa13.24□□□□□ -0.29
COL4A6-206ENST00000477085 HGDQ93099 445 aa13.24□□□□□ -0.29
COL4A6-206ENST00000477085 NODALQ96S42 347 aa13.24□□□□□ -0.29
COL4A6-206ENST00000477085 CNIH4Q9P003 139 aa13.24□□□□□ -0.29
COL4A6-206ENST00000477085 GMPPBQ9Y5P6 360 aa13.24□□□□□ -0.29
COL4A6-206ENST00000477085 LOC101059948A0A1B0GTJ6 334 aa13.23□□□□□ -0.29
COL4A6-206ENST00000477085 B4DXG7 233 aa13.23□□□□□ -0.29
COL4A6-206ENST00000477085 SOX14O95416 240 aa13.23□□□□□ -0.29
COL4A6-206ENST00000477085 UBL4AP11441 157 aa13.23□□□□□ -0.29
COL4A6-206ENST00000477085 OSMP13725 252 aa13.23□□□□□ -0.29
COL4A6-206ENST00000477085 HPGDP15428 266 aa13.23□□□□□ -0.29
COL4A6-206ENST00000477085 MST1P26927 711 aa13.23□□□□□ -0.29
COL4A6-206ENST00000477085 OTX2P32243 289 aa13.23□□□□□ -0.29
COL4A6-206ENST00000477085 STAT5AP42229 794 aa13.23□□□□□ -0.29
COL4A6-206ENST00000477085 GSSP48637 474 aa13.23□□□□□ -0.29
COL4A6-206ENST00000477085 UGT2B15P54855 530 aa13.23□□□□□ -0.29
COL4A6-206ENST00000477085 Q0VFX4 171 aa13.23□□□□□ -0.29
COL4A6-206ENST00000477085 IL18R1Q13478 541 aa13.23□□□□□ -0.29
COL4A6-206ENST00000477085 PTGES3Q15185 160 aaKnown RBP13.23□□□□□ -0.29
COL4A6-206ENST00000477085 TTC33Q6PID6 262 aaPredicted RBP13.23□□□□□ -0.29
COL4A6-206ENST00000477085 LINC00114Q6XXX2 140 aa13.23□□□□□ -0.29
COL4A6-206ENST00000477085 NDUFAF7Q7L592 441 aa13.23□□□□□ -0.29
COL4A6-206ENST00000477085 KIF18BQ86Y91 864 aa13.23□□□□□ -0.29
COL4A6-206ENST00000477085 NRMQ8IXM6 262 aa13.23□□□□□ -0.29
COL4A6-206ENST00000477085 CACTIN-AS1Q8N1I8 211 aa13.23□□□□□ -0.29
COL4A6-206ENST00000477085 ESX1Q8N693 406 aa13.23□□□□□ -0.29
COL4A6-206ENST00000477085 NLGN4YQ8NFZ3 816 aaPredicted RBP13.23□□□□□ -0.29
COL4A6-206ENST00000477085 PFN4Q8NHR9 129 aa13.23□□□□□ -0.29
COL4A6-206ENST00000477085 FAM46AQ96IP4 442 aaKnown RBP13.23□□□□□ -0.29
COL4A6-206ENST00000477085 TMEM27Q9HBJ8 222 aa13.23□□□□□ -0.29
COL4A6-206ENST00000477085 ZNF160Q9HCG1 818 aa13.23□□□□□ -0.29
COL4A6-206ENST00000477085 MMP25Q9NPA2 562 aa13.23□□□□□ -0.29
COL4A6-206ENST00000477085 C20orf141Q9NUB4 165 aa13.23□□□□□ -0.29
COL4A6-206ENST00000477085 A0A1W2PQD3 144 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 TRIM64A6NGJ6 449 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 ZAR1LA6NP61 321 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 ZNF264O43296 627 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 TNFAIP8O95379 198 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 WISP1O95388 367 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 CD63P08962 238 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 IFNA8P32881 189 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 EVI2BP34910 448 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 GGT2P36268 569 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 CRISP1P54107 249 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 NRG3P56975 720 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 ZNF117Q03924 483 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 CDK5R2Q13319 367 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 DNASE1L3Q13609 305 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 IL10RAQ13651 578 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 SSPNQ14714 243 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 TMPRSS12Q86WS5 348 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 CADM2Q8N3J6 435 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 LINC00471Q8N535 108 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 TOR1AIP2Q8NFQ8 470 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 CNIH3Q8TBE1 160 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 M1APQ8TC57 530 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 ZNF426Q9BUY5 554 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 DEFB126Q9BYW3 111 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 TRIM2Q9C040 744 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 DSN1Q9H410 356 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 MEPEQ9NQ76 525 aaPredicted RBP13.22□□□□□ -0.29
COL4A6-206ENST00000477085 EXOSC3Q9NQT5 275 aaKnown RBP13.22□□□□□ -0.29
COL4A6-206ENST00000477085 BATF3Q9NR55 127 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 MYRFQ9Y2G1 1151 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 MRPS18BQ9Y676 258 aaKnown RBP13.22□□□□□ -0.29
COL4A6-206ENST00000477085 NSG1A0A0A6YYJ2 146 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 GTPBP1O00178 669 aaKnown RBP13.22□□□□□ -0.29
COL4A6-206ENST00000477085 CDC42EP2O14613 210 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 RAD1O60671 282 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 SMNDC1O75940 238 aaKnown RBP eCLIP13.22□□□□□ -0.29
COL4A6-206ENST00000477085 ANGPTL1O95841 491 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 DLSTP36957 453 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 GPR4P46093 362 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 CDH15P55291 814 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 EXT1Q16394 746 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 FCRLBQ6BAA4 426 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 P3H2Q8IVL5 708 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 ENTHD1Q8IYW4 607 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 GNPDA2Q8TDQ7 276 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 RNF138Q8WVD3 245 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 TMEM239Q8WW34 195 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 APH1BQ8WW43 257 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 SGCDQ92629 289 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 SH3YL1Q96HL8 342 aaPredicted RBP13.22□□□□□ -0.29
COL4A6-206ENST00000477085 RASL10BQ96S79 203 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 LAT2Q9GZY6 243 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 ATP13A2Q9NQ11 1180 aa13.22□□□□□ -0.29
COL4A6-206ENST00000477085 HRH3Q9Y5N1 445 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms