RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 CCDC88BA6NC98 1476 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 TMEM213A2RRL7 107 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 TBC1D3BA6NDS4 549 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 NPEPPSL1A6NEC2 478 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 A8MWP6 167 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 KCNK1O00180 336 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 BTN3A3O00478 584 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 GOSR2O14653 212 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 CDIPTO14735 213 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 RAD1O60671 282 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 BANF1O75531 89 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 GLP2RO95838 553 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 MMP1P03956 469 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 RPLP0P05388 317 aaKnown RBP3.23□□□□□ -1.89
UBR3-208ENST00000474426 C2P06681 752 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 GTF2F2P13984 249 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 SLC6A11P48066 632 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 PRELPP51888 382 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 LIMK2P53671 638 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 ARPP19P56211 112 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 CLDN18P56856 261 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 KLF3P57682 345 aaPredicted RBP3.23□□□□□ -1.89
UBR3-208ENST00000474426 CSTF1Q05048 431 aaKnown RBP3.23□□□□□ -1.89
UBR3-208ENST00000474426 BIKQ13323 160 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 GTF2H2Q13888 395 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 CDNFQ49AH0 187 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 PYY3Q5JQD4 70 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 LGSNQ5TDP6 509 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 MBLAC2Q68D91 279 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 TBC1D3GQ6DHY5 549 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 ASPHD2Q6ICH7 369 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 GTF2H2CQ6P1K8 395 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 DEF8Q6ZN54 512 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 GRASPQ7Z6J2 395 aaPredicted RBP3.23□□□□□ -1.89
UBR3-208ENST00000474426 SLC22A16Q86VW1 577 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 LYG1Q8N1E2 194 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 ZNF557Q8N988 423 aaPredicted RBP3.23□□□□□ -1.89
UBR3-208ENST00000474426 CDRT4Q8N9R6 151 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 ZSCAN4Q8NAM6 433 aaPredicted RBP3.23□□□□□ -1.89
UBR3-208ENST00000474426 AQP11Q8NBQ7 271 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 OR2Z1Q8NG97 314 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 OR10X1Q8NGY0 326 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 TBCKQ8TEA7 893 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 RHBDD1Q8TEB9 315 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 DEDD2Q8WXF8 326 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 KCNJ9Q92806 393 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 RBBP8Q99708 897 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 NAPGQ99747 312 aaPredicted RBP3.23□□□□□ -1.89
UBR3-208ENST00000474426 NUDT22Q9BRQ3 303 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 ABHD6Q9BV23 337 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 PRR14Q9BWN1 585 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 SDCBP2Q9H190 292 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 IFNKQ9P0W0 207 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 PLAGL1Q9UM63 463 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 PIK3C2GO75747 1445 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 ZNF532Q9HCE3 1301 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 KRBOX1C9JBD0 128 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 LEFTY2O00292 366 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 SOX1O00570 391 aaPredicted RBP3.23□□□□□ -1.89
UBR3-208ENST00000474426 SDHDO14521 159 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 CYB561D2O14569 222 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 RS1O15537 224 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 CYB5BO43169 146 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 KHDRBS3O75525 346 aaKnown RBP3.23□□□□□ -1.89
UBR3-208ENST00000474426 CER1O95813 267 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 RLN1P04808 185 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 BMP3P12645 472 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 CSNK2A2P19784 350 aaPredicted RBP3.23□□□□□ -1.89
UBR3-208ENST00000474426 RAB6AP20340 208 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 S1PR1P21453 382 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 FBLN1P23142 703 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 RBMS1P29558 406 aaKnown RBP3.23□□□□□ -1.89
UBR3-208ENST00000474426 GLUD2P49448 558 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 TNFSF10P50591 281 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 MTM1Q13496 603 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 PRPSAP1Q14558 356 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 ZNF699Q32M78 642 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 PGGHGQ32M88 737 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 AASDHQ4L235 1098 aaPredicted RBP3.23□□□□□ -1.89
UBR3-208ENST00000474426 ZNF569Q5MCW4 686 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 CPZQ66K79 652 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 Q6ZVU0 165 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 PEG10Q86TG7 708 aaKnown RBP3.23□□□□□ -1.89
UBR3-208ENST00000474426 AMER2Q8N7J2 671 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 OR2AK2Q8NG84 335 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 HOXB13Q92826 284 aaPredicted RBP3.23□□□□□ -1.89
UBR3-208ENST00000474426 RAB3CQ96E17 227 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 CHST8Q9H2A9 424 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 REEP4Q9H6H4 257 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 RPF2Q9H7B2 306 aaKnown RBP3.23□□□□□ -1.89
UBR3-208ENST00000474426 TPT1P8Q9HAU6 139 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 SGK2Q9HBY8 427 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 EML4Q9HC35 981 aaKnown RBP3.23□□□□□ -1.89
UBR3-208ENST00000474426 HMG20AQ9NP66 347 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 ISYNA1Q9NPH2 558 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 GPR173Q9NS66 373 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 MTMR10Q9NXD2 777 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 SIDT1Q9NXL6 827 aaKnown RBP3.23□□□□□ -1.89
UBR3-208ENST00000474426 CGGBP1Q9UFW8 167 aaPredicted RBP3.23□□□□□ -1.89
UBR3-208ENST00000474426 IL17BQ9UHF5 180 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms