RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 GTF3C1Q12789 2109 aa12.44□□□□□ -0.42
USF1-205ENST00000473969 C7orf72A4D263 438 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 AGAP5A6NIR3 686 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 HSPB2A8KAH6 182 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 B4DXG7 233 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 SHISA8B8ZZ34 492 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 SEC14L5O43304 696 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 CLDN14O95500 239 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 NPPAP01160 153 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 RNF224P0DH78 156 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 GLI4P10075 376 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 UQCRBP14927 111 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 ZNF708P17019 499 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 SLC6A2P23975 617 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 ADH6P28332 368 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 CHRNB4P30926 498 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 SLC6A8P48029 635 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 HSPB2Q16082 182 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 MAPK14Q16539 360 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 SGCBQ16585 318 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 CYP51A1Q16850 503 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 ZSWIM7Q19AV6 140 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 NDUFAF6Q330K2 333 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 COQ5Q5HYK3 327 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 RIPPLY2Q5TAB7 128 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 PRAMEF8Q5VWM4 474 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 PRAMEF7Q5VXH5 474 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 AP1ARQ63HQ0 302 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 NSUN5P2Q63ZY6 315 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 RTL6Q6ICC9 239 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 DLEU7Q6UYE1 221 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 P4HA3Q7Z4N8 544 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 HMGN2P46Q86SG4 172 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 RETREG3Q86VR2 466 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 SNX32Q86XE0 403 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 KRT73Q86Y46 540 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 MSRB3Q8IXL7 192 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 RPRMLQ8N4K4 120 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 OR52P1PQ8NH57 321 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 GPR119Q8TDV5 335 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 ZG16BQ96DA0 208 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 ARSGQ96EG1 525 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 RNF145Q96MT1 663 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 ANKRD27Q96NW4 1050 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 PSMG3-AS1Q96PY0 264 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 TREX2Q9BQ50 279 aaPredicted RBP12.43□□□□□ -0.42
USF1-205ENST00000473969 TUBA1CQ9BQE3 449 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 SPATA5L1Q9BVQ7 753 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 QRSL1Q9H0R6 528 aaKnown RBP12.43□□□□□ -0.42
USF1-205ENST00000473969 RNF6Q9Y252 685 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 FAM215AQ9Y5M1 114 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 DNAJC13O75165 2243 aa12.43□□□□□ -0.42
USF1-205ENST00000473969 CENPVL1A0A0U1RR11 272 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 CD8B2A6NJW9 211 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 GJE1A6NN92 205 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 MRASO14807 208 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 OIP5O43482 229 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 NUDT7P0C024 238 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 BMP2P12643 396 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 NID1P14543 1247 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 CD1EP15812 388 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 HOXB9P17482 250 aaPredicted RBP12.42□□□□□ -0.42
USF1-205ENST00000473969 GPX2P18283 190 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 DRD4P21917 467 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 RYKP34925 604 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 TIMP3P35625 211 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 PGM1P36871 562 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 CLDN18P56856 261 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 RAC1P63000 192 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 CDK6Q00534 326 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 ART3Q13508 389 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 QPRTQ15274 297 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 TRMT5Q32P41 509 aaKnown RBP12.42□□□□□ -0.42
USF1-205ENST00000473969 REP15Q6BDI9 236 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 REEP3Q6NUK4 255 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 MYO7BQ6PIF6 2116 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 MTDHQ86UE4 582 aaKnown RBP12.42□□□□□ -0.42
USF1-205ENST00000473969 GRAMD2AQ8IUY3 354 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 ZNF440Q8IYI8 595 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 MARVELD2Q8N4S9 558 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 FBXO27Q8NI29 283 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 NFKBIDQ8NI38 313 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 RP9Q8TA86 221 aaKnown RBP12.42□□□□□ -0.42
USF1-205ENST00000473969 ST8SIA1Q92185 356 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 MAL2Q969L2 176 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 MRGPRX4Q96LA9 322 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 ZNF607Q96SK3 696 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 TM9SF2Q99805 663 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 CPPED1Q9BRF8 314 aaPredicted RBP12.42□□□□□ -0.42
USF1-205ENST00000473969 RUBCNLQ9H714 662 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 EXOSC3Q9NQT5 275 aaKnown RBP12.42□□□□□ -0.42
USF1-205ENST00000473969 SERINC1Q9NRX5 453 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 PAQR5Q9NXK6 330 aaPredicted RBP12.42□□□□□ -0.42
USF1-205ENST00000473969 ARMCX1Q9P291 453 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 PLEKHB1Q9UF11 243 aaPredicted RBP12.42□□□□□ -0.42
USF1-205ENST00000473969 ANGPT4Q9Y264 503 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 GMEB1Q9Y692 573 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 NCKAP5O14513 1909 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 HIVEP3Q5T1R4 2406 aa12.42□□□□□ -0.42
USF1-205ENST00000473969 FLNCQ14315 2725 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms