RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 PRPH2P23942 346 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 ATP5A1P25705 553 aaKnown RBP3.32□□□□□ -1.88
SCFD1-204ENST00000463622 MST1P26927 711 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 PPP2R1BP30154 601 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 TIA1P31483 386 aaKnown RBP eCLIP3.32□□□□□ -1.884e-8■■□□□ 11.9
SCFD1-204ENST00000463622 THBS4P35443 961 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 AHRP35869 848 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 PIK3CBP42338 1070 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 CPA2P48052 419 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 KRT6CP48668 564 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 DGKQP52824 942 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 IST1P53990 364 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 RPS15AP62244 130 aaKnown RBP3.32□□□□□ -1.88
SCFD1-204ENST00000463622 BTN3A2P78410 334 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 TXNL4AP83876 142 aaKnown RBP3.32□□□□□ -1.88
SCFD1-204ENST00000463622 Q0VFX4 171 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 CSTF3Q12996 717 aaKnown RBP3.32□□□□□ -1.88
SCFD1-204ENST00000463622 IFT88Q13099 833 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 GTDC1Q4AE62 458 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 PAGE2BQ5JRK9 111 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 NOXRED1Q6NXP6 359 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 CYP20A1Q6UW02 462 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 C6orf89Q6UWU4 347 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 DGAT2L6Q6ZPD8 337 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 CPLX4Q7Z7G2 160 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 OR4N5Q8IXE1 308 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 CNPY4Q8N129 248 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 CLEC4FQ8N1N0 589 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 KRT78Q8N1N4 520 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 CA13Q8N1Q1 262 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 C10orf111Q8N326 155 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 ACOT4Q8N9L9 421 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 FAM47BQ8NA70 645 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 FNDC5Q8NAU1 212 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 CDC26Q8NHZ8 85 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 C16orf78Q8WTQ4 265 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 ZUFSPQ96AP4 578 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 SLC22A18Q96BI1 424 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 TM4SF18Q96CE8 201 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 CMTM7Q96FZ5 175 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 GBP5Q96PP8 586 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 CCDC106Q9BWC9 280 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 ANKRA2Q9H9E1 313 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 ACTR5Q9H9F9 607 aaPredicted RBP3.32□□□□□ -1.88
SCFD1-204ENST00000463622 TRIM36Q9NQ86 728 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 C1orf109Q9NX04 203 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 GAR1Q9NY12 217 aaKnown RBP3.32□□□□□ -1.88
SCFD1-204ENST00000463622 PSD3Q9NYI0 1048 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 ABI3Q9P2A4 366 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 CTSFQ9UBX1 484 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 SNX6Q9UNH7 406 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 PLCL2Q9UPR0 1127 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 CORO2BQ9UQ03 480 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 ZNF835Q9Y2P0 537 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 NAALAD2Q9Y3Q0 740 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 ASB4Q9Y574 426 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 SNX13Q9Y5W8 968 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 MDC1Q14676 2089 aaKnown RBP3.32□□□□□ -1.88
SCFD1-204ENST00000463622 STAB1Q9NY15 2570 aa3.32□□□□□ -1.88
SCFD1-204ENST00000463622 SPTBP11277 2137 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 HYKKA2RU49 373 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 CD8B2A6NJW9 211 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 C9J4A7 227 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 SLC28A1O00337 649 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 NDUFAB1O14561 156 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 PGRMC2O15173 223 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 ZSCAN9O15535 394 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-204ENST00000463622 SCN2BO60939 215 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 CDC123O75794 336 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-204ENST00000463622 OR2B3O76000 313 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 WISP2O76076 250 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 SCELO95171 688 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 AIFM1O95831 613 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 SERPINA6P08185 405 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 C8orf89P0DMQ9 161 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 T-ENOLP0DO92 83 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 TROVE2P10155 538 aaKnown RBP eCLIP3.31□□□□□ -1.88
SCFD1-204ENST00000463622 ALOX12P18054 663 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 LBPP18428 481 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 MMP11P24347 488 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 PIK3R1P27986 724 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 TACR3P29371 465 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 CDKN2CP42773 168 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 SMSP52788 366 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 TAS2R50P59544 299 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 ERVK-8P63133 956 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 BTG2P78543 158 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 PLIN5Q00G26 463 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 RELAQ04206 551 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 EMX2Q04743 252 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 MFAP5Q13361 173 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 CUL3Q13618 768 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 LTB4RQ15722 352 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 INAQ16352 499 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 IMPG1Q17R60 797 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 ATP6AP1LQ52LC2 224 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 SPANXN4Q5MJ08 99 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 OR4C11Q6IEV9 310 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 FAM71E1Q6IPT2 247 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 RHBDD2Q6NTF9 364 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms