RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 NKX6-3A6NJ46 265 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 ELOA3DA6NLF2 546 aaPredicted RBP3.58□□□□□ -1.84
UBR3-206ENST00000444475 NPIPA7E9PJI5 369 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 PPP1R2P9O14990 202 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 CHUKO15111 745 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 CFLARO15519 480 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 NPIPA8P0DM63 369 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 STX2P32856 288 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 CSKP41240 450 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 DCDC1P59894 354 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 E2F1Q01094 437 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 FOXL1Q12952 345 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 EXOSC2Q13868 293 aaKnown RBP3.58□□□□□ -1.84
UBR3-206ENST00000444475 GRB14Q14449 540 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 ELOA3BQ3SY89 546 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 CEACAM20Q6UY09 585 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 LINC00336Q6ZUF6 198 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 TMPRSS11BQ86T26 416 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 C1QL4Q86Z23 238 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 MMAAQ8IVH4 418 aaKnown RBP3.58□□□□□ -1.84
UBR3-206ENST00000444475 ZFP82Q8N141 532 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 PARP16Q8N5Y8 322 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 BEST2Q8NFU1 509 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 ELOA3Q8NG57 546 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 PIH1D2Q8WWB5 315 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 DPH7Q9BTV6 452 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 CADM1Q9BY67 442 aaKnown RBP3.58□□□□□ -1.84
UBR3-206ENST00000444475 GANQ9H2C0 597 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 INPP5EQ9NRR6 644 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 CAMSAP2Q08AD1 1489 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 CTTNBP2Q8WZ74 1663 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 A0A0A0MQY5 61 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 SMCO3A2RU48 225 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 AP4M1O00189 453 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 SIGLEC5O15389 551 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 LAMTOR5O43504 91 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 SLC28A2O43868 658 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 SRPX2O60687 465 aaPredicted RBP3.58□□□□□ -1.84
UBR3-206ENST00000444475 MED6O75586 246 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 APRTP07741 180 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 ADRB3P13945 408 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 SRD5A1P18405 259 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 SLC1A1P43005 524 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 MAGEA3P43357 314 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 OMPP47874 163 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 KPNA2P52292 529 aaKnown RBP3.58□□□□□ -1.84
UBR3-206ENST00000444475 ATP1B3P54709 279 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 APOFQ13790 326 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 SLC9A3R2Q15599 337 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 ZNF74Q16587 644 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 AKIRIN2Q53H80 203 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 LYPLAL1Q5VWZ2 237 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 STUMQ69YW2 141 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 TAPT1Q6NXT6 567 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 ZNF530Q6P9A1 599 aaPredicted RBP3.58□□□□□ -1.84
UBR3-206ENST00000444475 UNQ6126/PRO20091Q6UXV3 157 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 PQLC2Q6ZP29 291 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 DPY19L4Q7Z388 723 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 CPEB2Q7Z5Q1 589 aaKnown RBP3.58□□□□□ -1.84
UBR3-206ENST00000444475 SPRED2Q7Z698 418 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 ZAR1Q86SH2 424 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 CALHM1Q8IU99 346 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 CRLF3Q8IUI8 442 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 IZUMO1Q8IYV9 350 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 LINC01356Q8N9X3 169 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 MDS2Q8NDY4 140 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 OR56A4Q8NGH8 313 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 RNF183Q96D59 192 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 IL4I1Q96RQ9 567 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 EBNA1BP2Q99848 306 aaKnown RBP3.58□□□□□ -1.84
UBR3-206ENST00000444475 PCGF1Q9BSM1 259 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 YTHDF1Q9BYJ9 559 aaKnown RBP3.58□□□□□ -1.84
UBR3-206ENST00000444475 SYT4Q9H2B2 425 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 KIR3DX1Q9H7L2 352 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 SLC28A3Q9HAS3 691 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 CHMP1AQ9HD42 196 aaPredicted RBP3.58□□□□□ -1.84
UBR3-206ENST00000444475 SIRT7Q9NRC8 400 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 PARVAQ9NVD7 372 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 GPR83Q9NYM4 423 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 IFNKQ9P0W0 207 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 STOML2Q9UJZ1 356 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 PRG3Q9Y2Y8 225 aaPredicted RBP3.58□□□□□ -1.84
UBR3-206ENST00000444475 WDR45Q9Y484 360 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 CNTNAP5Q8WYK1 1306 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 SAMD9Q5K651 1589 aa3.58□□□□□ -1.84
UBR3-206ENST00000444475 A6NIZ1 184 aa3.57□□□□□ -1.84
UBR3-206ENST00000444475 ACOX3O15254 700 aa3.57□□□□□ -1.84
UBR3-206ENST00000444475 PLEKHA8P1O95397 391 aa3.57□□□□□ -1.84
UBR3-206ENST00000444475 SNAP29O95721 258 aa3.57□□□□□ -1.84
UBR3-206ENST00000444475 ALDOCP09972 364 aaKnown RBP3.57□□□□□ -1.84
UBR3-206ENST00000444475 SLC2A1P11166 492 aa3.57□□□□□ -1.84
UBR3-206ENST00000444475 BMP3P12645 472 aa3.57□□□□□ -1.84
UBR3-206ENST00000444475 ZNF35P13682 527 aa3.57□□□□□ -1.84
UBR3-206ENST00000444475 IDSP22304 550 aa3.57□□□□□ -1.84
UBR3-206ENST00000444475 CXCR2P25025 360 aa3.57□□□□□ -1.84
UBR3-206ENST00000444475 DCKP27707 260 aa3.57□□□□□ -1.84
UBR3-206ENST00000444475 PTGER1P34995 402 aa3.57□□□□□ -1.84
UBR3-206ENST00000444475 RFX3P48380 749 aa3.57□□□□□ -1.84
UBR3-206ENST00000444475 IDH2P48735 452 aaKnown RBP3.57□□□□□ -1.84
UBR3-206ENST00000444475 PLA2G16P53816 162 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms