RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 CRLF2Q9HC73 371 aa10.93□□□□□ -0.66
SMPD4-209ENST00000439886 FZD3Q9NPG1 666 aa10.93□□□□□ -0.66
SMPD4-209ENST00000439886 TRIM36Q9NQ86 728 aa10.93□□□□□ -0.66
SMPD4-209ENST00000439886 TESQ9UGI8 421 aaKnown RBP10.93□□□□□ -0.66
SMPD4-209ENST00000439886 LSM7Q9UK45 103 aaKnown RBP10.93□□□□□ -0.66
SMPD4-209ENST00000439886 A4GNTQ9UNA3 340 aa10.93□□□□□ -0.66
SMPD4-209ENST00000439886 SIRT4Q9Y6E7 314 aaPredicted RBP10.93□□□□□ -0.66
SMPD4-209ENST00000439886 LAMA2P24043 3122 aaKnown RBP10.93□□□□□ -0.66
SMPD4-209ENST00000439886 ANXA2P2A6NMY6 339 aa10.93□□□□□ -0.66
SMPD4-209ENST00000439886 E9PI62 339 aa10.93□□□□□ -0.66
SMPD4-209ENST00000439886 GFYI3L273 518 aa10.93□□□□□ -0.66
SMPD4-209ENST00000439886 SOX30O94993 753 aa10.93□□□□□ -0.66
SMPD4-209ENST00000439886 ADH1CP00326 375 aa10.93□□□□□ -0.66
SMPD4-209ENST00000439886 RLN2P04090 185 aa10.93□□□□□ -0.66
SMPD4-209ENST00000439886 FAM157BP0CG42 384 aa10.93□□□□□ -0.66
SMPD4-209ENST00000439886 SAGP10523 405 aaPredicted RBP10.93□□□□□ -0.66
SMPD4-209ENST00000439886 TMEM11P17152 192 aa10.93□□□□□ -0.66
SMPD4-209ENST00000439886 BMP7P18075 431 aa10.93□□□□□ -0.66
SMPD4-209ENST00000439886 MAPK9P45984 424 aa10.93□□□□□ -0.66
SMPD4-209ENST00000439886 HCCSP53701 268 aa10.93□□□□□ -0.66
SMPD4-209ENST00000439886 E2F1Q01094 437 aa10.93□□□□□ -0.66
SMPD4-209ENST00000439886 ACSM3Q53FZ2 586 aa10.93□□□□□ -0.66
SMPD4-209ENST00000439886 BEX5Q5H9J7 111 aa10.93□□□□□ -0.66
SMPD4-209ENST00000439886 FAM74A1Q5RGS3 127 aa10.93□□□□□ -0.66
SMPD4-209ENST00000439886 TMEM201Q5SNT2 666 aa10.93□□□□□ -0.66
SMPD4-209ENST00000439886 ATRAIDQ6UW56 229 aa10.93□□□□□ -0.66
SMPD4-209ENST00000439886 APOOLQ6UXV4 268 aa10.93□□□□□ -0.66
SMPD4-209ENST00000439886 CHST9Q7L1S5 443 aa10.93□□□□□ -0.66
SMPD4-209ENST00000439886 TMEM173Q86WV6 379 aaPredicted RBP10.93□□□□□ -0.66
SMPD4-209ENST00000439886 DMRTC2Q8IXT2 367 aaPredicted RBP10.93□□□□□ -0.66
SMPD4-209ENST00000439886 ACOT12Q8WYK0 555 aa10.93□□□□□ -0.66
SMPD4-209ENST00000439886 HS6ST2Q96MM7 605 aa10.93□□□□□ -0.66
SMPD4-209ENST00000439886 KCNJ15Q99712 375 aa10.93□□□□□ -0.66
SMPD4-209ENST00000439886 MAP3K3Q99759 626 aa10.93□□□□□ -0.66
SMPD4-209ENST00000439886 SEMA4CQ9C0C4 833 aa10.93□□□□□ -0.66
SMPD4-209ENST00000439886 BRF2Q9HAW0 419 aa10.93□□□□□ -0.66
SMPD4-209ENST00000439886 CYSLTR2Q9NS75 346 aa10.93□□□□□ -0.66
SMPD4-209ENST00000439886 TRBV23OR9-2A0A075B6M9 112 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 TRBV5-4A0A0C4DH59 114 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 TERTO14746 1132 aaKnown RBP10.92□□□□□ -0.66
SMPD4-209ENST00000439886 RECKO95980 971 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 FGBP02675 491 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 MPC1LP0DKB6 136 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 GSTM3P21266 225 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 NFYAP23511 347 aaPredicted RBP10.92□□□□□ -0.66
SMPD4-209ENST00000439886 HSD3B2P26439 372 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 FGF9P31371 208 aaPredicted RBP10.92□□□□□ -0.66
SMPD4-209ENST00000439886 IRS1P35568 1242 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 SSR2P43308 183 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 PCBP3P57721 371 aaKnown RBP10.92□□□□□ -0.66
SMPD4-209ENST00000439886 GSG1Q2KHT4 349 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 VASNQ6EMK4 673 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 ZNF322Q6U7Q0 402 aaPredicted RBP10.92□□□□□ -0.66
SMPD4-209ENST00000439886 HSD11B1LQ7Z5J1 315 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 OAFQ86UD1 273 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 COMTD1Q86VU5 262 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 VRK2Q86Y07 508 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 SIRT6Q8N6T7 355 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 DCAF4L2Q8NA75 395 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 OR2T4Q8NH00 348 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 HSD17B8Q92506 261 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 PLD4Q96BZ4 506 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 PDXPQ96GD0 296 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 SYT17Q9BSW7 474 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 IFT27Q9BW83 186 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.92□□□□□ -0.661e-6■■■■■ 32
SMPD4-209ENST00000439886 OR2AG1Q9H205 316 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 BABAM2Q9NXR7 383 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 TAC3Q9UHF0 121 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 OR10H1Q9Y4A9 318 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 FKBP7Q9Y680 259 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 CHD5Q8TDI0 1954 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 MEIS3P1A6NDR6 274 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 H7BY64 318 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 HMGN4O00479 90 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 SYN1P17600 705 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 TBXA2RP21731 343 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 P2RY4P51582 365 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 CLDN2P57739 230 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 TP53I3Q53FA7 332 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 FAM71E1Q6IPT2 247 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 SLC24A5Q71RS6 500 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 RHOUQ7L0Q8 258 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 NKAIN4Q8IVV8 208 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 PDZD9Q8IXQ8 264 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 OR51A7Q8NH64 312 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 SORCS1Q8WY21 1168 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 C16orf58Q96GQ5 468 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 PRAP1Q96NZ9 151 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 WNT5BQ9H1J7 359 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 HINT3Q9NQE9 182 aaKnown RBP10.92□□□□□ -0.66
SMPD4-209ENST00000439886 KLHL28Q9NXS3 571 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 MARK1Q9P0L2 795 aa10.92□□□□□ -0.66
SMPD4-209ENST00000439886 DBX1A6NMT0 343 aa10.91□□□□□ -0.66
SMPD4-209ENST00000439886 KPNA3O00505 521 aaPredicted RBP10.91□□□□□ -0.66
SMPD4-209ENST00000439886 PPM1DO15297 605 aa10.91□□□□□ -0.66
SMPD4-209ENST00000439886 OR1F1O43749 312 aa10.91□□□□□ -0.66
SMPD4-209ENST00000439886 EIF3GO75821 320 aaKnown RBP eCLIP10.91□□□□□ -0.66
SMPD4-209ENST00000439886 SLC11A1P49279 550 aa10.91□□□□□ -0.66
SMPD4-209ENST00000439886 ERV3-1Q14264 604 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms