RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 KIAA1211LQ6NV74 962 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 GDF7Q7Z4P5 450 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 IL21RQ9HBE5 538 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 ANKHQ9HCJ1 492 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 TMEM74BQ9NUR3 256 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 RPS6KB2Q9UBS0 482 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 SIRT4Q9Y6E7 314 aaPredicted RBP12.44□□□□□ -0.42
USP42-203ENST00000426246 GVINP1Q7Z2Y8 2422 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 COL6A3P12111 3177 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 IDSB3KWA1 339 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 CACNB4O00305 520 aaPredicted RBP12.44□□□□□ -0.42
USP42-203ENST00000426246 RLN1P04808 185 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 HPGDP15428 266 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 CMPK1P30085 196 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 CDK10Q15131 360 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 PUS10Q3MIT2 529 aaKnown RBP12.44□□□□□ -0.42
USP42-203ENST00000426246 PLK5Q496M5 336 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 XKRXQ6PP77 449 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 LUZP2Q86TE4 346 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 SETD7Q8WTS6 366 aaKnown RBP12.44□□□□□ -0.42
USP42-203ENST00000426246 UPRTQ96BW1 309 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 SIGLEC11Q96RL6 698 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 C1QTNF6Q9BXI9 259 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 TMEM168Q9H0V1 697 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 SYNPO2LQ9H987 977 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 SRA1Q9HD15 236 aaKnown RBP12.44□□□□□ -0.42
USP42-203ENST00000426246 ZNF224Q9NZL3 707 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 HCN3Q9P1Z3 774 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 FLVCR2Q9UPI3 526 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 ADAM18Q9Y3Q7 739 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 FAM86C2PA6NEL3 165 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 SGK494L7N484 410 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 KHNYNO15037 678 aaKnown RBP12.44□□□□□ -0.42
USP42-203ENST00000426246 PDE7AQ13946 482 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 MAPK14Q16539 360 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 MRPL2Q5T653 305 aaKnown RBP12.44□□□□□ -0.42
USP42-203ENST00000426246 TMEM64Q6YI46 380 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 CDH24Q86UP0 819 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 GPR135Q8IZ08 494 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 PIAS4Q8N2W9 510 aaPredicted RBP12.44□□□□□ -0.42
USP42-203ENST00000426246 TOMM5Q8N4H5 51 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 TRMT10AQ8TBZ6 339 aaKnown RBP12.44□□□□□ -0.42
USP42-203ENST00000426246 GNPDA2Q8TDQ7 276 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 ZNF431Q8TF32 576 aaPredicted RBP12.44□□□□□ -0.42
USP42-203ENST00000426246 TSSK2Q96PF2 358 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 THAP7Q9BT49 309 aaPredicted RBP12.44□□□□□ -0.42
USP42-203ENST00000426246 ZNF717Q9BY31 904 aaPredicted RBP12.44□□□□□ -0.42
USP42-203ENST00000426246 TBC1D29Q9UFV1 150 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 MGAT4AQ9UM21 535 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 NCKAP1Q9Y2A7 1128 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 TRIOBPQ9H2D6 2365 aa12.44□□□□□ -0.42
USP42-203ENST00000426246 NPIPB8E9PQR5 432 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 EMC8O43402 210 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 POU3F3P20264 500 aaPredicted RBP12.43□□□□□ -0.42
USP42-203ENST00000426246 TLX1P31314 330 aaPredicted RBP12.43□□□□□ -0.42
USP42-203ENST00000426246 RGS1Q08116 209 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 KCNAB1Q14722 419 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 MEDAGQ5VYS4 303 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 LINC00471Q8N535 108 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 PMEPA1Q969W9 287 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 MS4A6EQ96DS6 147 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 ELP4Q96EB1 424 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 TNFRSF13CQ96RJ3 184 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 POLDIP3Q9BY77 421 aaKnown RBP12.43□□□□□ -0.42
USP42-203ENST00000426246 OR10A4Q9H209 315 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 UBQLN3Q9H347 655 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 EPHX3Q9H6B9 360 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 MAN2C1Q9NTJ4 1040 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 A0A0B4J293 547 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 IGKV1-8A0A0C4DH67 115 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 SHISA7A6NL88 538 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 RIIAD1A6NNX1 92 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 CHST10O43529 356 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 LGI1O95970 557 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 APODP05090 189 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 FBXO15Q8NCQ5 510 aaPredicted RBP12.43□□□□□ -0.42
USP42-203ENST00000426246 C17orf47Q8NEP4 570 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 SEMA4CQ9C0C4 833 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 SLC38A1Q9H2H9 487 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 TAS2R7Q9NYW3 318 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 DIMT1Q9UNQ2 313 aaKnown RBP12.43□□□□□ -0.42
USP42-203ENST00000426246 AHCTF1Q8WYP5 2266 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 GXYLT2A0PJZ3 443 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 HMX3A6NHT5 357 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 KHDRBS3O75525 346 aaKnown RBP12.43□□□□□ -0.42
USP42-203ENST00000426246 PROS1P07225 676 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 ACADMP11310 421 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 ARSBP15848 533 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 TNFRSF4P43489 277 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 UBE2MP61081 183 aaKnown RBP12.43□□□□□ -0.42
USP42-203ENST00000426246 METRNLQ641Q3 311 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 ABHD17CQ6PCB6 329 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 THSD4Q6ZMP0 1018 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 FGD2Q7Z6J4 655 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 RFLNBQ8N5W9 214 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 BOLLQ8N9W6 283 aaKnown RBP12.43□□□□□ -0.42
USP42-203ENST00000426246 OR4N2Q8NGD1 307 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 OR4D9Q8NGE8 314 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 COX14Q96I36 57 aa12.43□□□□□ -0.42
USP42-203ENST00000426246 SLC25A19Q9HC21 320 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms