RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 LNX2Q8N448 690 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 NANOGP1Q8N7R0 232 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 ZNF441Q8N8Z8 693 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 C17orf47Q8NEP4 570 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 OR2T33Q8NG76 320 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 OR52I1Q8NGK6 324 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 SLC2A12Q8TD20 617 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 LGALS12Q96DT0 336 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 DTNBP1Q96EV8 351 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 LRR1Q96L50 414 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 OPALINQ96PE5 141 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 OR5M11Q96RB7 305 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 MND1Q9BWT6 205 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 TEX12Q9BXU0 123 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 OR52D1Q9H346 318 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 UBQLN3Q9H347 655 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 HHATLQ9HCP6 504 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 ISYNA1Q9NPH2 558 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 MEPEQ9NQ76 525 aaPredicted RBP8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 SIDT1Q9NXL6 827 aaKnown RBP8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 DHCR7Q9UBM7 475 aaKnown RBP8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 OSGIN1Q9UJX0 560 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 ICAM5Q9UMF0 924 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 BAIAP2Q9UQB8 552 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 SIGLEC7Q9Y286 467 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 MED31Q9Y3C7 131 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 A3GALT2U3KPV4 340 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 CPAMD8Q8IZJ3 1885 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 PCNX3Q9H6A9 2034 aa8.34□□□□□ -1.07
LINCMD1-201ENST00000418518 A0A1W2PQD3 144 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 A0A1W2PQM1 296 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 TMEM129A0AVI4 362 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 PTP4A3O75365 173 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 CSO75390 466 aaKnown RBP8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 RAB36O95755 333 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 RPLP0P05388 317 aaKnown RBP8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 CYC1P08574 325 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 IFI30P13284 250 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 MYF5P13349 255 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 GADD45AP24522 165 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 RGS6P49758 472 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 PGDP52209 483 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 MLLT10P55197 1068 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 NCS1P62166 190 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 TUBA1BP68363 451 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 MLLT11Q13015 90 aaPredicted RBP8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 TMED1Q13445 227 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 FHL1Q13642 323 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 DOC2BQ14184 412 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 EBPQ15125 230 aaKnown RBP8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 TIMM50Q3ZCQ8 353 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 SNAP47Q5SQN1 464 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 ARMC4Q5T2S8 1044 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 NXNL2Q5VZ03 156 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 ZNF385CQ66K41 422 aaPredicted RBP8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 SLC30A6Q6NXT4 461 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 ULK3Q6PHR2 472 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 ZC3H14Q6PJT7 736 aaKnown RBP8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 KIRREL2Q6UWL6 708 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 TUBA1AQ71U36 451 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 ATCAYQ86WG3 371 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 MEX3DQ86XN8 651 aaKnown RBP8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 GATAD2AQ86YP4 633 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 CROCCP3Q8IVE0 287 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 ANKK1Q8NFD2 765 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 PFN4Q8NHR9 129 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 CEP76Q8TAP6 659 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 NDNFQ8TB73 568 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 FANK1Q8TC84 345 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 DNAJA4Q8WW22 397 aaPredicted RBP8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 EDAQ92838 391 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 RPL3LQ92901 407 aaKnown RBP8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 DAZLQ92904 295 aaKnown RBP8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 RFKQ969G6 155 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 BPIFA2Q96DR5 249 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 LCORQ96JN0 433 aaPredicted RBP8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 SAMD8Q96LT4 415 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 LRFN5Q96NI6 719 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 MGLLQ99685 303 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 NUDT9Q9BW91 350 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 DPH1Q9BZG8 443 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 SLC19A3Q9BZV2 496 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 VN1R1Q9GZP7 353 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 NXF5Q9H1B4 397 aaKnown RBP8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 LRRN3Q9H3W5 708 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 PLGRKTQ9HBL7 147 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 PALMDQ9NP74 551 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 UBQLN4Q9NRR5 601 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 PNO1Q9NRX1 252 aaKnown RBP8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 SLC22A11Q9NSA0 550 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 C20orf141Q9NUB4 165 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 TAS2R16Q9NYV7 291 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 CCDC59Q9P031 241 aaKnown RBP8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 FBXO4Q9UKT5 387 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 ERGIC3Q9Y282 383 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 EXOGQ9Y2C4 368 aaKnown RBP8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 EXOSC1Q9Y3B2 195 aaKnown RBP8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 OR10H1Q9Y4A9 318 aa8.33□□□□□ -1.08
LINCMD1-201ENST00000418518 A0A087WUJ7 227 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms