RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 CALML5Q9NZT1 146 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 FLRT3Q9NZU0 649 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 RPS6KA6Q9UK32 745 aa14.29□□□□□ -0.12
SHMT2-202ENST00000414700 IGF2RP11717 2491 aa14.28□□□□□ -0.12
SHMT2-202ENST00000414700 PCDH17O14917 1159 aa14.28□□□□□ -0.12
SHMT2-202ENST00000414700 KIAA0513O60268 411 aa14.28□□□□□ -0.12
SHMT2-202ENST00000414700 MAN1A2O60476 641 aa14.28□□□□□ -0.12
SHMT2-202ENST00000414700 UGT2B17O75795 530 aa14.28□□□□□ -0.12
SHMT2-202ENST00000414700 GABARAPO95166 117 aa14.28□□□□□ -0.12
SHMT2-202ENST00000414700 AK1P00568 194 aa14.28□□□□□ -0.12
SHMT2-202ENST00000414700 ABCD3P28288 659 aa14.28□□□□□ -0.12
SHMT2-202ENST00000414700 ALDH3A2P51648 485 aa14.28□□□□□ -0.12
SHMT2-202ENST00000414700 VLDLRP98155 873 aa14.28□□□□□ -0.12
SHMT2-202ENST00000414700 PUM1Q14671 1186 aaKnown RBP eCLIP14.28□□□□□ -0.12
SHMT2-202ENST00000414700 FLYWCH1Q4VC44 716 aa14.28□□□□□ -0.12
SHMT2-202ENST00000414700 SMUG1Q53HV7 270 aa14.28□□□□□ -0.12
SHMT2-202ENST00000414700 PRAMEF8Q5VWM4 474 aa14.28□□□□□ -0.12
SHMT2-202ENST00000414700 PRAMEF7Q5VXH5 474 aa14.28□□□□□ -0.12
SHMT2-202ENST00000414700 FCRLBQ6BAA4 426 aa14.28□□□□□ -0.12
SHMT2-202ENST00000414700 ZNF619Q8N2I2 560 aa14.28□□□□□ -0.12
SHMT2-202ENST00000414700 OR4C3Q8NH37 302 aa14.28□□□□□ -0.12
SHMT2-202ENST00000414700 BDH2Q9BUT1 245 aa14.28□□□□□ -0.12
SHMT2-202ENST00000414700 TP63Q9H3D4 680 aaPredicted RBP14.28□□□□□ -0.12
SHMT2-202ENST00000414700 SNX5Q9Y5X3 404 aa14.28□□□□□ -0.12
SHMT2-202ENST00000414700 HEATR5AQ86XA9 2040 aa14.28□□□□□ -0.12
SHMT2-202ENST00000414700 EML6Q6ZMW3 1958 aa14.28□□□□□ -0.12
SHMT2-202ENST00000414700 BOD1L1Q8NFC6 3051 aa14.28□□□□□ -0.12
SHMT2-202ENST00000414700 ISPDA4D126 451 aa14.27□□□□□ -0.12
SHMT2-202ENST00000414700 CENPBD1B2RD01 187 aa14.27□□□□□ -0.12
SHMT2-202ENST00000414700 PDE9AO76083 593 aa14.27□□□□□ -0.12
SHMT2-202ENST00000414700 SEMG1P04279 462 aa14.27□□□□□ -0.12
SHMT2-202ENST00000414700 HTR1AP08908 422 aa14.27□□□□□ -0.12
SHMT2-202ENST00000414700 THRBP10828 461 aa14.27□□□□□ -0.12
SHMT2-202ENST00000414700 ITGAMP11215 1152 aa14.27□□□□□ -0.12
SHMT2-202ENST00000414700 DCAF7P61962 342 aa14.27□□□□□ -0.12
SHMT2-202ENST00000414700 CLN3Q13286 438 aa14.27□□□□□ -0.12
SHMT2-202ENST00000414700 TOP3AQ13472 1001 aaPredicted RBP14.27□□□□□ -0.12
SHMT2-202ENST00000414700 DAG1Q14118 895 aa14.27□□□□□ -0.12
SHMT2-202ENST00000414700 EXT1Q16394 746 aa14.27□□□□□ -0.12
SHMT2-202ENST00000414700 TBPL2Q6SJ96 375 aa14.27□□□□□ -0.12
SHMT2-202ENST00000414700 TSEN54Q7Z6J9 526 aaKnown RBP14.27□□□□□ -0.12
SHMT2-202ENST00000414700 KRT73Q86Y46 540 aa14.27□□□□□ -0.12
SHMT2-202ENST00000414700 C17orf47Q8NEP4 570 aa14.27□□□□□ -0.12
SHMT2-202ENST00000414700 NUBPLQ8TB37 319 aa14.27□□□□□ -0.12
SHMT2-202ENST00000414700 PHF10Q8WUB8 498 aaKnown RBP14.27□□□□□ -0.12
SHMT2-202ENST00000414700 KIAA1143Q96AT1 154 aaPredicted RBP14.27□□□□□ -0.12
SHMT2-202ENST00000414700 ADOQ96SZ5 270 aa14.27□□□□□ -0.12
SHMT2-202ENST00000414700 CHID1Q9BWS9 393 aa14.27□□□□□ -0.12
SHMT2-202ENST00000414700 DGCR6LQ9BY27 220 aa14.27□□□□□ -0.12
SHMT2-202ENST00000414700 DEFB126Q9BYW3 111 aa14.27□□□□□ -0.12
SHMT2-202ENST00000414700 MTHFD2LQ9H903 347 aaPredicted RBP14.27□□□□□ -0.12
SHMT2-202ENST00000414700 MMP25Q9NPA2 562 aa14.27□□□□□ -0.12
SHMT2-202ENST00000414700 MYOTQ9UBF9 498 aa14.27□□□□□ -0.12
SHMT2-202ENST00000414700 AGAP5A6NIR3 686 aa14.27□□□□□ -0.13
SHMT2-202ENST00000414700 hCG_2039718K7EN88 272 aa14.27□□□□□ -0.13
SHMT2-202ENST00000414700 M0R3G1 203 aa14.27□□□□□ -0.13
SHMT2-202ENST00000414700 OR2J2O76002 312 aa14.27□□□□□ -0.13
SHMT2-202ENST00000414700 ZFAND5O76080 213 aa14.27□□□□□ -0.13
SHMT2-202ENST00000414700 DIRAS1O95057 198 aa14.27□□□□□ -0.13
SHMT2-202ENST00000414700 NADKO95544 446 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-202ENST00000414700 ALPPP05187 535 aa14.27□□□□□ -0.13
SHMT2-202ENST00000414700 IL7RP16871 459 aa14.27□□□□□ -0.13
SHMT2-202ENST00000414700 CD40LGP29965 261 aa14.27□□□□□ -0.13
SHMT2-202ENST00000414700 KCNJ5P48544 419 aa14.27□□□□□ -0.13
SHMT2-202ENST00000414700 CHRNB3Q05901 458 aa14.27□□□□□ -0.13
SHMT2-202ENST00000414700 DECR1Q16698 335 aa14.27□□□□□ -0.13
SHMT2-202ENST00000414700 ZIK1Q3SY52 487 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-202ENST00000414700 FAM98BQ52LJ0 330 aaKnown RBP14.27□□□□□ -0.13
SHMT2-202ENST00000414700 ZNF311Q5JNZ3 666 aa14.27□□□□□ -0.13
SHMT2-202ENST00000414700 LSRQ86X29 649 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-202ENST00000414700 OR4D11Q8NGI4 311 aa14.27□□□□□ -0.13
SHMT2-202ENST00000414700 OR8K3Q8NH51 312 aa14.27□□□□□ -0.13
SHMT2-202ENST00000414700 OR52P1PQ8NH57 321 aa14.27□□□□□ -0.13
SHMT2-202ENST00000414700 M1APQ8TC57 530 aa14.27□□□□□ -0.13
SHMT2-202ENST00000414700 APOBEC4Q8WW27 367 aaKnown RBP14.27□□□□□ -0.13
SHMT2-202ENST00000414700 NACC2Q96BF6 587 aa14.27□□□□□ -0.13
SHMT2-202ENST00000414700 ARSGQ96EG1 525 aa14.27□□□□□ -0.13
SHMT2-202ENST00000414700 UGT2B28Q9BY64 529 aa14.27□□□□□ -0.13
SHMT2-202ENST00000414700 TESMINQ9Y4I5 508 aa14.27□□□□□ -0.13
SHMT2-202ENST00000414700 CHD8Q9HCK8 2581 aa14.26□□□□□ -0.13
SHMT2-202ENST00000414700 CACNA1AO00555 2505 aa14.26□□□□□ -0.13
SHMT2-202ENST00000414700 NOTOA8MTQ0 251 aa14.26□□□□□ -0.13
SHMT2-202ENST00000414700 TO15178 435 aa14.26□□□□□ -0.13
SHMT2-202ENST00000414700 FRS3O43559 492 aa14.26□□□□□ -0.13
SHMT2-202ENST00000414700 REM1O75628 298 aa14.26□□□□□ -0.13
SHMT2-202ENST00000414700 SOX30O94993 753 aa14.26□□□□□ -0.13
SHMT2-202ENST00000414700 HPP00738 406 aa14.26□□□□□ -0.13
SHMT2-202ENST00000414700 HPRP00739 348 aa14.26□□□□□ -0.13
SHMT2-202ENST00000414700 IFNA14P01570 189 aa14.26□□□□□ -0.13
SHMT2-202ENST00000414700 RAP2AP10114 183 aa14.26□□□□□ -0.13
SHMT2-202ENST00000414700 RPS4Y1P22090 263 aaKnown RBP14.26□□□□□ -0.13
SHMT2-202ENST00000414700 NR4A2P43354 598 aa14.26□□□□□ -0.13
SHMT2-202ENST00000414700 GP2P55259 537 aaKnown RBP14.26□□□□□ -0.13
SHMT2-202ENST00000414700 PLAURQ03405 335 aa14.26□□□□□ -0.13
SHMT2-202ENST00000414700 PLCXD2Q0VAA5 305 aa14.26□□□□□ -0.13
SHMT2-202ENST00000414700 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.26□□□□□ -0.13
SHMT2-202ENST00000414700 PDZK1Q5T2W1 519 aa14.26□□□□□ -0.13
SHMT2-202ENST00000414700 ADCK1Q86TW2 530 aa14.26□□□□□ -0.13
SHMT2-202ENST00000414700 RBM45Q8IUH3 476 aaKnown RBP14.26□□□□□ -0.13
SHMT2-202ENST00000414700 CLIP4Q8N3C7 705 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms