RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 MED12LQ86YW9 2145 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 GRAMD2AQ8IUY3 354 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF454Q8N9F8 522 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 CDCA4Q9BXL8 241 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 TBCCD1Q9NVR7 557 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 TEX10Q9NXF1 929 aaPredicted RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 MAT2BQ9NZL9 334 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 CAB39Q9Y376 341 aaPredicted RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 TRBV5-3A0A0A0MS03 114 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 P04436 131 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 FOLR3P41439 243 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 YAP1P46937 504 aaKnown RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 PGGT1BP53609 377 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF181Q2M3W8 571 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 CRTC2Q53ET0 693 aaPredicted RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 MRPL2Q5T653 305 aaKnown RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 SLC22A10Q63ZE4 541 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 CALHM3Q86XJ0 350 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ANKRD13BQ86YJ7 626 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 GDPD1Q8N9F7 314 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 OR9A2Q8NGT5 310 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 SFXN2Q96NB2 322 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 SDF2Q99470 211 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 RERGLQ9H628 205 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 FKRPQ9H9S5 495 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 CUEDC1Q9NWM3 386 aaPredicted RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 UGT2A1Q9Y4X1 527 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 A8MVM7 634 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 GP1BAP07359 652 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 GABRA5P31644 462 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 PPP5CP53041 499 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 DUSP7Q16829 419 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ALG10Q5BKT4 473 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 C3orf38Q5JPI3 329 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ARHGAP22Q7Z5H3 698 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 COMMD2Q86X83 199 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF417Q8TAU3 575 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 COG8Q96MW5 612 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 CNN2Q99439 309 aaKnown RBP3.16□□□□□ -1.9
VPS13C-203ENST00000395896 OR10A5Q9H207 317 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 SLC24A3Q9HC58 644 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 CNIH4Q9P003 139 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 KLF15Q9UIH9 416 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 PLAGL1Q9UM63 463 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 ERVK-19Q9WJR5 959 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 MTORP42345 2549 aa3.16□□□□□ -1.9
VPS13C-203ENST00000395896 SLC35A2P78381 396 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 PLP2Q04941 152 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 MAD2L1BPQ15013 274 aaPredicted RBP3.15□□□□□ -1.9
VPS13C-203ENST00000395896 CCDC58Q4VC31 144 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 OR2L13Q8N349 312 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 OR51Q1Q8NH59 317 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 MR1Q95460 341 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 HDHD2Q9H0R4 259 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 AMBNQ9NP70 447 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 EMC3Q9P0I2 261 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 TMEM129A0AVI4 362 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 BLOC1S5-TXNDC5H3BN57 136 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 ARPC3O15145 178 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 PCDHGA12O60330 932 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 RDH16O75452 317 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 IGF2P01344 180 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF182P17025 639 aaPredicted RBP3.15□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF43P17038 809 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 EIF2S3P41091 472 aaKnown RBP3.15□□□□□ -1.9
VPS13C-203ENST00000395896 LIM2P55344 173 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 PCBD1P61457 104 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 CRYZQ08257 329 aaKnown RBP3.15□□□□□ -1.9
VPS13C-203ENST00000395896 C1orf61Q13536 156 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 ISXQ2M1V0 245 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 DUS1LQ6P1R4 473 aaKnown RBP3.15□□□□□ -1.9
VPS13C-203ENST00000395896 NRMQ8IXM6 262 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 CCDC54Q8NEL0 328 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 MOCOSQ96EN8 888 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 GABARAPL3Q9BY60 117 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 IL20Q9NYY1 176 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 PPP4R1LQ9P1A2 415 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 FTSJ1Q9UET6 329 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 B3GALT5Q9Y2C3 310 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 A0A0A6YYC8 382 aaPredicted RBP3.15□□□□□ -1.9
VPS13C-203ENST00000395896 A6NHS1 94 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 I3L1I5 382 aaPredicted RBP3.15□□□□□ -1.9
VPS13C-203ENST00000395896 TFAP2AP05549 437 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 CSNK1EP49674 416 aaKnown RBP3.15□□□□□ -1.9
VPS13C-203ENST00000395896 NUDT6P53370 316 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 SELENOVP59797 346 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 SGCBQ16585 318 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 LEXMQ3ZCV2 418 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 EIF5AL1Q6IS14 154 aaKnown RBP3.15□□□□□ -1.9
VPS13C-203ENST00000395896 NSMAFQ92636 917 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 C12orf43Q96C57 262 aaKnown RBP3.15□□□□□ -1.9
VPS13C-203ENST00000395896 MSLNLQ96KJ4 702 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 OR4K3Q96R72 315 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 ADOQ96SZ5 270 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 GPN1Q9HCN4 374 aaPredicted RBP3.15□□□□□ -1.9
VPS13C-203ENST00000395896 MBNL1Q9NR56 388 aaKnown RBP3.15□□□□□ -1.9
VPS13C-203ENST00000395896 PKD1L2Q7Z442 2459 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 CPSF4LA6NMK7 179 aaKnown RBP3.15□□□□□ -1.9
VPS13C-203ENST00000395896 ADORA3P0DMS8 318 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF28P17035 718 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms