RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 ELK4P28324 431 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 SFTPDP35247 375 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 CLK3P49761 638 aaKnown RBP11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 PPOXP50336 477 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 ARL4CP56559 192 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 SLC25A3Q00325 362 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 CHRNEQ04844 493 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 MGAT5Q09328 741 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 GABRA6Q16445 453 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 DECR1Q16698 335 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 GRAMD1BQ3KR37 738 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 ZNF786Q8N393 782 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 STAG3L4Q8TBR4 150 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 FBXO25Q8TCJ0 367 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 SLC9A6Q92581 669 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 CFAP36Q96G28 342 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 ZNF300Q96RE9 604 aaPredicted RBP11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 TXLNGYQ9BZA5 131 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 TBL1XR1Q9BZK7 514 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 RACGAP1Q9H0H5 632 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 CDC42EP4Q9H3Q1 356 aaKnown RBP11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 PLK3Q9H4B4 646 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 ALG9Q9H6U8 611 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 UNKLQ9H9P5 680 aaKnown RBP11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 TIGARQ9NQ88 270 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 TAS2R9Q9NYW1 312 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 KLHL9Q9P2J3 617 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 UTS2RQ9UKP6 389 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 CHMP2BQ9UQN3 213 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 SNX24Q9Y343 169 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 TRAF6Q9Y4K3 522 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 PTGDR2Q9Y5Y4 395 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 ZNF780BQ9Y6R6 833 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 PDLIM1O00151 329 aa11.9□□□□□ -0.5
VCPKMT-201ENST00000395859 CYTIPO60759 359 aa11.9□□□□□ -0.5
VCPKMT-201ENST00000395859 KERAO60938 352 aa11.9□□□□□ -0.5
VCPKMT-201ENST00000395859 SNUPNO95149 360 aaKnown RBP11.9□□□□□ -0.5
VCPKMT-201ENST00000395859 CLDN9O95484 217 aa11.9□□□□□ -0.5
VCPKMT-201ENST00000395859 NGFRP08138 427 aa11.9□□□□□ -0.5
VCPKMT-201ENST00000395859 LTA4HP09960 611 aaKnown RBP11.9□□□□□ -0.5
VCPKMT-201ENST00000395859 DAOP14920 347 aa11.9□□□□□ -0.5
VCPKMT-201ENST00000395859 IDH3GP51553 393 aaPredicted RBP11.9□□□□□ -0.5
VCPKMT-201ENST00000395859 PLTPP55058 493 aa11.9□□□□□ -0.5
VCPKMT-201ENST00000395859 FOXG1P55316 489 aaPredicted RBP11.9□□□□□ -0.5
VCPKMT-201ENST00000395859 SLC18A2Q05940 514 aa11.9□□□□□ -0.5
VCPKMT-201ENST00000395859 CCNIQ14094 377 aa11.9□□□□□ -0.5
VCPKMT-201ENST00000395859 EFNB3Q15768 340 aa11.9□□□□□ -0.5
VCPKMT-201ENST00000395859 TCHHL1Q5QJ38 904 aaPredicted RBP11.9□□□□□ -0.5
VCPKMT-201ENST00000395859 HP1BP3Q5SSJ5 553 aaPredicted RBP11.9□□□□□ -0.5
VCPKMT-201ENST00000395859 FBXW9Q5XUX1 488 aa11.9□□□□□ -0.5
VCPKMT-201ENST00000395859 ZDHHC24Q6UX98 284 aa11.9□□□□□ -0.5
VCPKMT-201ENST00000395859 THSD4Q6ZMP0 1018 aa11.9□□□□□ -0.5
VCPKMT-201ENST00000395859 VRK1Q99986 396 aaPredicted RBP11.9□□□□□ -0.5
VCPKMT-201ENST00000395859 TMEM109Q9BVC6 243 aa11.9□□□□□ -0.5
VCPKMT-201ENST00000395859 SUCNR1Q9BXA5 334 aa11.9□□□□□ -0.5
VCPKMT-201ENST00000395859 C1QTNF6Q9BXI9 259 aa11.9□□□□□ -0.5
VCPKMT-201ENST00000395859 SLITRK2Q9H156 845 aa11.9□□□□□ -0.5
VCPKMT-201ENST00000395859 DPH5Q9H2P9 285 aa11.9□□□□□ -0.5
VCPKMT-201ENST00000395859 NSMCE4AQ9NXX6 385 aa11.9□□□□□ -0.5
VCPKMT-201ENST00000395859 AHSPQ9NZD4 102 aa11.9□□□□□ -0.5
VCPKMT-201ENST00000395859 WNK2Q9Y3S1 2297 aa11.89□□□□□ -0.51
VCPKMT-201ENST00000395859 IGHV3-15A0A0B4J1V0 119 aa11.89□□□□□ -0.51
VCPKMT-201ENST00000395859 B9A039 149 aa11.89□□□□□ -0.51
VCPKMT-201ENST00000395859 NTF4P34130 210 aa11.89□□□□□ -0.51
VCPKMT-201ENST00000395859 SERPINF1P36955 418 aa11.89□□□□□ -0.51
VCPKMT-201ENST00000395859 TRA2BP62995 288 aaKnown RBP11.89□□□□□ -0.51
VCPKMT-201ENST00000395859 ZNF155Q12901 538 aaPredicted RBP11.89□□□□□ -0.51
VCPKMT-201ENST00000395859 FRG2Q64ET8 278 aa11.89□□□□□ -0.51
VCPKMT-201ENST00000395859 SLC46A3Q7Z3Q1 461 aa11.89□□□□□ -0.51
VCPKMT-201ENST00000395859 MRGPRX4Q96LA9 322 aa11.89□□□□□ -0.51
VCPKMT-201ENST00000395859 FRG2BQ96QU4 278 aa11.89□□□□□ -0.51
VCPKMT-201ENST00000395859 GPR22Q99680 433 aa11.89□□□□□ -0.51
VCPKMT-201ENST00000395859 SLC6A7Q99884 636 aa11.89□□□□□ -0.51
VCPKMT-201ENST00000395859 PKP2Q99959 881 aa11.89□□□□□ -0.51
VCPKMT-201ENST00000395859 LMF2Q9BU23 707 aaKnown RBP11.89□□□□□ -0.51
VCPKMT-201ENST00000395859 ROPN1BQ9BZX4 212 aaPredicted RBP11.89□□□□□ -0.51
VCPKMT-201ENST00000395859 ROPN1Q9HAT0 212 aaPredicted RBP11.89□□□□□ -0.51
VCPKMT-201ENST00000395859 G6PC2Q9NQR9 355 aa11.89□□□□□ -0.51
VCPKMT-201ENST00000395859 ACSS1Q9NUB1 689 aaPredicted RBP11.89□□□□□ -0.51
VCPKMT-201ENST00000395859 A0A087WV62 115 aa11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 POM121CA8CG34 1229 aa11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 SUPT3HB4E1H0 165 aa11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 C9JVG2 144 aa11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 OR7A17O14581 309 aa11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 NDUFB5O43674 189 aa11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 SUPT3HO75486 399 aa11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 SASH3O75995 380 aa11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 PDE5AO76074 875 aa11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 MSMBP08118 114 aa11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 ITGA5P08648 1049 aa11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 ABHD2P08910 425 aa11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 GP5P40197 560 aa11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 EIF1P41567 113 aaKnown RBP11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 RAC3P60763 192 aa11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 MLC1Q15049 377 aa11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 ADIPOQQ15848 244 aa11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 GOLGA7Q7Z5G4 137 aa11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 GALNT5Q7Z7M9 940 aa11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 CDYL2Q8N8U2 506 aa11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 OR4C3Q8NH37 302 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms