RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 DBIP07108 87 aaKnown RBP14.21□□□□□ -0.13
CPSF7-202ENST00000394888 GUSBP08236 651 aa14.21□□□□□ -0.13
CPSF7-202ENST00000394888 RCVRNP35243 200 aa14.21□□□□□ -0.13
CPSF7-202ENST00000394888 C1DQ13901 141 aaKnown RBP14.21□□□□□ -0.13
CPSF7-202ENST00000394888 CXXC5Q7LFL8 322 aaKnown RBP14.21□□□□□ -0.13
CPSF7-202ENST00000394888 GLCCI1Q86VQ1 547 aa14.21□□□□□ -0.13
CPSF7-202ENST00000394888 GRAMD2AQ8IUY3 354 aa14.21□□□□□ -0.13
CPSF7-202ENST00000394888 AHCYL2Q96HN2 611 aaKnown RBP14.21□□□□□ -0.13
CPSF7-202ENST00000394888 KCTD7Q96MP8 289 aa14.21□□□□□ -0.13
CPSF7-202ENST00000394888 CCDC86Q9H6F5 360 aaKnown RBP14.21□□□□□ -0.13
CPSF7-202ENST00000394888 NLGN3Q9NZ94 848 aa14.21□□□□□ -0.13
CPSF7-202ENST00000394888 CD207Q9UJ71 328 aa14.21□□□□□ -0.13
CPSF7-202ENST00000394888 POMT2Q9UKY4 750 aa14.21□□□□□ -0.13
CPSF7-202ENST00000394888 SPTY2D1-AS1A0A0U1RR47 76 aa14.21□□□□□ -0.14
CPSF7-202ENST00000394888 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.21□□□□□ -0.14
CPSF7-202ENST00000394888 IMPA2O14732 288 aa14.21□□□□□ -0.14
CPSF7-202ENST00000394888 KIR2DL3P43628 341 aa14.21□□□□□ -0.14
CPSF7-202ENST00000394888 CRTC2Q53ET0 693 aaPredicted RBP14.21□□□□□ -0.14
CPSF7-202ENST00000394888 FCRLBQ6BAA4 426 aa14.21□□□□□ -0.14
CPSF7-202ENST00000394888 Q6ZS52 159 aa14.21□□□□□ -0.14
CPSF7-202ENST00000394888 CDRT4Q8N9R6 151 aa14.21□□□□□ -0.14
CPSF7-202ENST00000394888 CAMKVQ8NCB2 501 aa14.21□□□□□ -0.14
CPSF7-202ENST00000394888 C17orf47Q8NEP4 570 aa14.21□□□□□ -0.14
CPSF7-202ENST00000394888 UFD1Q92890 307 aa14.21□□□□□ -0.14
CPSF7-202ENST00000394888 SLC38A2Q96QD8 506 aa14.21□□□□□ -0.14
CPSF7-202ENST00000394888 CMC2Q9NRP2 79 aa14.21□□□□□ -0.14
CPSF7-202ENST00000394888 KLHL3Q9UH77 587 aa14.21□□□□□ -0.14
CPSF7-202ENST00000394888 RDH16O75452 317 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 E2F1Q01094 437 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 DSG2Q14126 1118 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 DEFB110Q30KQ9 67 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 OR9A4Q8NGU2 314 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 FANK1Q8TC84 345 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 HS6ST2Q96MM7 605 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 PTCHD1Q96NR3 888 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 SECISBP2Q96T21 854 aaKnown RBP14.2□□□□□ -0.14
CPSF7-202ENST00000394888 TMED9Q9BVK6 235 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 FN3KQ9H479 309 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 TOR4AQ9NXH8 423 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 NPAP1Q9NZP6 1156 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 TRAV27A0A087WT01 109 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 C2orf92A0A1B0GVN3 265 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 FAM221BA6H8Z2 402 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 HPGDSO60760 199 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 APEX1P27695 318 aaKnown RBP14.2□□□□□ -0.14
CPSF7-202ENST00000394888 IFNGR2P38484 337 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 FOXK2Q01167 660 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 SLC35F1Q5T1Q4 408 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 XKRXQ6PP77 449 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 RNF113BQ8IZP6 322 aaKnown RBP14.2□□□□□ -0.14
CPSF7-202ENST00000394888 SLC37A3Q8NCC5 494 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 OR52R1Q8NGF1 315 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 MMP28Q9H239 520 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 RERGLQ9H628 205 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 MMP17Q9ULZ9 603 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 OR5K3A6NET4 321 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 MYL12AP19105 171 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 DRD1P21728 446 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 FAM27D1Q5T7N8 215 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 PRPF38BQ5VTL8 546 aaKnown RBP14.2□□□□□ -0.14
CPSF7-202ENST00000394888 ZCCHC12Q6PEW1 402 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 KIAA1324Q6UXG2 1013 aaKnown RBP14.2□□□□□ -0.14
CPSF7-202ENST00000394888 MEPCEQ7L2J0 689 aaKnown RBP14.2□□□□□ -0.14
CPSF7-202ENST00000394888 PXKQ7Z7A4 578 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 KLBQ86Z14 1044 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 ZNF285Q96NJ3 590 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 ASB6Q9NWX5 421 aa14.2□□□□□ -0.14
CPSF7-202ENST00000394888 C2orf74A8MZ97 194 aa14.19□□□□□ -0.14
CPSF7-202ENST00000394888 GALP22466 123 aa14.19□□□□□ -0.14
CPSF7-202ENST00000394888 SF3B4Q15427 424 aaKnown RBP eCLIP14.19□□□□□ -0.141e-9■■■■■ 29.1
CPSF7-202ENST00000394888 MANEAQ5SRI9 462 aa14.19□□□□□ -0.14
CPSF7-202ENST00000394888 AKAP14Q86UN6 197 aa14.19□□□□□ -0.14
CPSF7-202ENST00000394888 LSMEM1Q8N8F7 131 aa14.19□□□□□ -0.14
CPSF7-202ENST00000394888 ANKRD10Q9NXR5 420 aa14.19□□□□□ -0.14
CPSF7-202ENST00000394888 CD8B2A6NJW9 211 aa14.19□□□□□ -0.14
CPSF7-202ENST00000394888 B4DXG7 233 aa14.19□□□□□ -0.14
CPSF7-202ENST00000394888 RNF13O43567 381 aa14.19□□□□□ -0.14
CPSF7-202ENST00000394888 TSPAN19P0C672 248 aa14.19□□□□□ -0.14
CPSF7-202ENST00000394888 CT45A8P0DMV1 189 aa14.19□□□□□ -0.14
CPSF7-202ENST00000394888 CT45A9P0DMV2 189 aa14.19□□□□□ -0.14
CPSF7-202ENST00000394888 CD8BP10966 210 aa14.19□□□□□ -0.14
CPSF7-202ENST00000394888 EVX1P49640 407 aa14.19□□□□□ -0.14
CPSF7-202ENST00000394888 RAB38P57729 211 aa14.19□□□□□ -0.14
CPSF7-202ENST00000394888 VSX2P58304 361 aaPredicted RBP14.19□□□□□ -0.14
CPSF7-202ENST00000394888 BDH1Q02338 343 aa14.19□□□□□ -0.14
CPSF7-202ENST00000394888 CT45A2Q5DJT8 189 aa14.19□□□□□ -0.14
CPSF7-202ENST00000394888 ATAD3CQ5T2N8 411 aa14.19□□□□□ -0.14
CPSF7-202ENST00000394888 PDZK1Q5T2W1 519 aa14.19□□□□□ -0.14
CPSF7-202ENST00000394888 CSNK1A1LQ8N752 337 aa14.19□□□□□ -0.14
CPSF7-202ENST00000394888 KIAA1143Q96AT1 154 aaPredicted RBP14.19□□□□□ -0.14
CPSF7-202ENST00000394888 BPIFA2Q96DR5 249 aa14.19□□□□□ -0.14
CPSF7-202ENST00000394888 C1GALT1C1Q96EU7 318 aa14.19□□□□□ -0.14
CPSF7-202ENST00000394888 CHRNA9Q9UGM1 479 aa14.19□□□□□ -0.14
CPSF7-202ENST00000394888 IRGMA1A4Y4 181 aa14.19□□□□□ -0.14
CPSF7-202ENST00000394888 TFP02787 698 aa14.19□□□□□ -0.14
CPSF7-202ENST00000394888 GABRA3P34903 492 aa14.19□□□□□ -0.14
CPSF7-202ENST00000394888 AGFG1P52594 562 aaKnown RBP14.19□□□□□ -0.14
CPSF7-202ENST00000394888 FNDC7Q5VTL7 733 aa14.19□□□□□ -0.14
CPSF7-202ENST00000394888 SAMD14Q8IZD0 417 aaPredicted RBP14.19□□□□□ -0.14
CPSF7-202ENST00000394888 ATP6V1C2Q8NEY4 427 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms