RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 PELOQ9BRX2 385 aaKnown RBP11.68□□□□□ -0.54
VPS16-202ENST00000380445 DPH1Q9BZG8 443 aa11.68□□□□□ -0.54
VPS16-202ENST00000380445 TRIM2Q9C040 744 aa11.68□□□□□ -0.54
VPS16-202ENST00000380445 UBQLN3Q9H347 655 aa11.68□□□□□ -0.54
VPS16-202ENST00000380445 Q9N2J8 555 aa11.68□□□□□ -0.54
VPS16-202ENST00000380445 SOHLH2Q9NX45 425 aa11.68□□□□□ -0.54
VPS16-202ENST00000380445 EXOGQ9Y2C4 368 aaKnown RBP11.68□□□□□ -0.54
VPS16-202ENST00000380445 TLCD2A6NGC4 264 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 ZNF749O43361 778 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 CHP2O43745 196 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 CTSBP07858 339 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 ATP6V1E1P36543 226 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 ETV6P41212 452 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 RFX3P48380 749 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 RUNX1T1Q06455 604 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 TPBGQ13641 420 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 DOC2BQ14184 412 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 PLK5Q496M5 336 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 PDZK1Q5T2W1 519 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 C17orf82Q86X59 251 aaPredicted RBP11.67□□□□□ -0.54
VPS16-202ENST00000380445 SLC38A6Q8IZM9 456 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 DEFB119Q8N690 84 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 ZNF614Q8N883 585 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 BPIFA2Q96DR5 249 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 VSTM2LQ96N03 204 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 NELL2Q99435 816 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 RBCK1Q9BYM8 510 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 ABCB10Q9NRK6 738 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 TMEM131Q92545 1883 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 FAM86C2PA6NEL3 165 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 SLC30A4O14863 429 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 HRO43593 1189 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 CTBP2P56545 445 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 SERTAD2Q14140 314 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 SMAD2Q15796 467 aaKnown RBP11.67□□□□□ -0.54
VPS16-202ENST00000380445 LRIT3Q3SXY7 679 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 HSDL2Q6YN16 418 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 ZNF550Q7Z398 422 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 CMIPQ8IY22 773 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 SLC43A2Q8N370 569 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 PARP16Q8N5Y8 322 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 MMABQ96EY8 250 aaPredicted RBP11.67□□□□□ -0.54
VPS16-202ENST00000380445 ZDHHC12Q96GR4 267 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 ARHGAP9Q9BRR9 750 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 RAB33BQ9H082 229 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 LMO7DNF2Z398 122 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 LOC110117498-PIK3R3F6TDL0 507 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 H0YIG0 161 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 ICMTO60725 284 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 LYPD3O95274 346 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 PAICSP22234 425 aaKnown RBP11.67□□□□□ -0.54
VPS16-202ENST00000380445 GALNSP34059 522 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 RBM34P42696 430 aaKnown RBP11.67□□□□□ -0.54
VPS16-202ENST00000380445 SLC1A3P43003 542 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 ZNF267Q14586 743 aaPredicted RBP11.67□□□□□ -0.54
VPS16-202ENST00000380445 CARTPTQ16568 116 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 ARMC4Q5T2S8 1044 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 CXXC5Q7LFL8 322 aaKnown RBP11.67□□□□□ -0.54
VPS16-202ENST00000380445 SLC22A16Q86VW1 577 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 LYSMD2Q8IV50 215 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 GATAD2BQ8WXI9 593 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 SHDQ96IW2 340 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 MIR1-1HGQ9H1L0 117 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 SP140LQ9H930 580 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 GSTK1Q9Y2Q3 226 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 CSNK1G3Q9Y6M4 447 aa11.67□□□□□ -0.54
VPS16-202ENST00000380445 A0A0B4J2E0 115 aa11.66□□□□□ -0.54
VPS16-202ENST00000380445 A0A1B0GX12 115 aa11.66□□□□□ -0.54
VPS16-202ENST00000380445 ZSCAN5BA6NJL1 495 aa11.66□□□□□ -0.54
VPS16-202ENST00000380445 TBX1O43435 398 aa11.66□□□□□ -0.54
VPS16-202ENST00000380445 HCN1O60741 890 aa11.66□□□□□ -0.54
VPS16-202ENST00000380445 MTRF1O75570 445 aaKnown RBP11.66□□□□□ -0.54
VPS16-202ENST00000380445 IL1AP01583 271 aa11.66□□□□□ -0.54
VPS16-202ENST00000380445 SAGP10523 405 aaPredicted RBP11.66□□□□□ -0.54
VPS16-202ENST00000380445 MAKP20794 623 aa11.66□□□□□ -0.54
VPS16-202ENST00000380445 SSTR4P31391 388 aa11.66□□□□□ -0.54
VPS16-202ENST00000380445 RPS19P39019 145 aaKnown RBP11.66□□□□□ -0.54
VPS16-202ENST00000380445 GABRA4P48169 554 aa11.66□□□□□ -0.54
VPS16-202ENST00000380445 EPHA4P54764 986 aa11.66□□□□□ -0.54
VPS16-202ENST00000380445 RPL6Q02878 288 aaKnown RBP11.66□□□□□ -0.54
VPS16-202ENST00000380445 KRR1Q13601 381 aaKnown RBP11.66□□□□□ -0.54
VPS16-202ENST00000380445 GRM7Q14831 915 aa11.66□□□□□ -0.54
VPS16-202ENST00000380445 ZNF141Q15928 474 aa11.66□□□□□ -0.54
VPS16-202ENST00000380445 OR2G6Q5TZ20 316 aa11.66□□□□□ -0.54
VPS16-202ENST00000380445 OGFOD3Q6PK18 319 aa11.66□□□□□ -0.54
VPS16-202ENST00000380445 WDR88Q6ZMY6 472 aa11.66□□□□□ -0.54
VPS16-202ENST00000380445 LNX2Q8N448 690 aa11.66□□□□□ -0.54
VPS16-202ENST00000380445 KLHL36Q8N4N3 616 aa11.66□□□□□ -0.54
VPS16-202ENST00000380445 LSMEM1Q8N8F7 131 aa11.66□□□□□ -0.54
VPS16-202ENST00000380445 PFN4Q8NHR9 129 aa11.66□□□□□ -0.54
VPS16-202ENST00000380445 CNOT9Q92600 299 aaKnown RBP11.66□□□□□ -0.54
VPS16-202ENST00000380445 TGM7Q96PF1 710 aa11.66□□□□□ -0.54
VPS16-202ENST00000380445 JAM3Q9BX67 310 aa11.66□□□□□ -0.54
VPS16-202ENST00000380445 NEK6Q9HC98 313 aa11.66□□□□□ -0.54
VPS16-202ENST00000380445 IL20RAQ9UHF4 553 aa11.66□□□□□ -0.54
VPS16-202ENST00000380445 CBLCQ9ULV8 474 aa11.66□□□□□ -0.54
VPS16-202ENST00000380445 BAIAP2Q9UQB8 552 aa11.66□□□□□ -0.54
VPS16-202ENST00000380445 AKAP8O43823 692 aaKnown RBP11.66□□□□□ -0.54
VPS16-202ENST00000380445 CDC123O75794 336 aaPredicted RBP11.66□□□□□ -0.54
VPS16-202ENST00000380445 SNX4O95219 450 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms