RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 SEZ6L2Q6UXD5 910 aa12.03□□□□□ -0.48
MSH5-204ENST00000375755 TMEM184AQ6ZMB5 413 aa12.03□□□□□ -0.48
MSH5-204ENST00000375755 Q6ZTK2 550 aa12.03□□□□□ -0.48
MSH5-204ENST00000375755 ANKRD53Q8N9V6 530 aa12.03□□□□□ -0.48
MSH5-204ENST00000375755 TEX47Q8TBZ9 253 aa12.03□□□□□ -0.48
MSH5-204ENST00000375755 ELMOD3Q96FG2 381 aa12.03□□□□□ -0.48
MSH5-204ENST00000375755 ZNF416Q9BWM5 594 aa12.03□□□□□ -0.48
MSH5-204ENST00000375755 SORBS1Q9BX66 1292 aaKnown RBP12.03□□□□□ -0.48
MSH5-204ENST00000375755 SEC14L3Q9UDX4 400 aa12.03□□□□□ -0.48
MSH5-204ENST00000375755 GLS2Q9UI32 602 aa12.03□□□□□ -0.48
MSH5-204ENST00000375755 CHST10O43529 356 aa12.02□□□□□ -0.48
MSH5-204ENST00000375755 B4GALT2O60909 372 aa12.02□□□□□ -0.48
MSH5-204ENST00000375755 WNT1P04628 370 aa12.02□□□□□ -0.48
MSH5-204ENST00000375755 APODP05090 189 aa12.02□□□□□ -0.48
MSH5-204ENST00000375755 HOXB3P14651 431 aaPredicted RBP12.02□□□□□ -0.48
MSH5-204ENST00000375755 COL9A1P20849 921 aa12.02□□□□□ -0.48
MSH5-204ENST00000375755 LTBRP36941 435 aa12.02□□□□□ -0.48
MSH5-204ENST00000375755 KIR2DL1P43626 348 aaPredicted RBP12.02□□□□□ -0.48
MSH5-204ENST00000375755 CBX5P45973 191 aa12.02□□□□□ -0.48
MSH5-204ENST00000375755 KIAA1024LP59773 190 aa12.02□□□□□ -0.48
MSH5-204ENST00000375755 SFRP5Q5T4F7 317 aa12.02□□□□□ -0.48
MSH5-204ENST00000375755 SFXN4Q6P4A7 337 aa12.02□□□□□ -0.48
MSH5-204ENST00000375755 ZNF322Q6U7Q0 402 aaPredicted RBP12.02□□□□□ -0.48
MSH5-204ENST00000375755 SLCO4C1Q6ZQN7 724 aa12.02□□□□□ -0.48
MSH5-204ENST00000375755 MRGPREQ86SM8 312 aa12.02□□□□□ -0.48
MSH5-204ENST00000375755 ZNF740Q8NDX6 193 aa12.02□□□□□ -0.48
MSH5-204ENST00000375755 BBS1Q8NFJ9 593 aa12.02□□□□□ -0.48
MSH5-204ENST00000375755 RPLP0P6Q8NHW5 317 aa12.02□□□□□ -0.48
MSH5-204ENST00000375755 COQ8AQ8NI60 647 aa12.02□□□□□ -0.48
MSH5-204ENST00000375755 TRMT10AQ8TBZ6 339 aaKnown RBP12.02□□□□□ -0.48
MSH5-204ENST00000375755 CDCA3Q99618 268 aaPredicted RBP12.02□□□□□ -0.48
MSH5-204ENST00000375755 DPYSL5Q9BPU6 564 aa12.02□□□□□ -0.48
MSH5-204ENST00000375755 HDAC8Q9BY41 377 aa12.02□□□□□ -0.48
MSH5-204ENST00000375755 COPZ2Q9P299 210 aa12.02□□□□□ -0.48
MSH5-204ENST00000375755 GMEB2Q9UKD1 530 aa12.02□□□□□ -0.48
MSH5-204ENST00000375755 COPS3Q9UNS2 423 aa12.02□□□□□ -0.48
MSH5-204ENST00000375755 FLVCR2Q9UPI3 526 aa12.02□□□□□ -0.48
MSH5-204ENST00000375755 PLXND1Q9Y4D7 1925 aa12.02□□□□□ -0.49
MSH5-204ENST00000375755 SLC9B1P1A6NJY1 282 aa12.02□□□□□ -0.49
MSH5-204ENST00000375755 NTN1O95631 604 aa12.02□□□□□ -0.49
MSH5-204ENST00000375755 CATP04040 527 aaKnown RBP12.02□□□□□ -0.49
MSH5-204ENST00000375755 ACP5P13686 325 aa12.02□□□□□ -0.49
MSH5-204ENST00000375755 DPTQ07507 201 aa12.02□□□□□ -0.49
MSH5-204ENST00000375755 COL9A2Q14055 689 aaPredicted RBP12.02□□□□□ -0.49
MSH5-204ENST00000375755 HACD4Q5VWC8 232 aa12.02□□□□□ -0.49
MSH5-204ENST00000375755 ELSPBP1Q96BH3 223 aa12.02□□□□□ -0.49
MSH5-204ENST00000375755 NEURL3Q96EH8 262 aa12.02□□□□□ -0.49
MSH5-204ENST00000375755 ZFP3Q96NJ6 502 aa12.02□□□□□ -0.49
MSH5-204ENST00000375755 ZDHHC5Q9C0B5 715 aa12.02□□□□□ -0.49
MSH5-204ENST00000375755 BTBD1Q9H0C5 482 aa12.02□□□□□ -0.49
MSH5-204ENST00000375755 MED9Q9NWA0 146 aa12.02□□□□□ -0.49
MSH5-204ENST00000375755 LIPT1Q9Y234 373 aa12.02□□□□□ -0.49
MSH5-204ENST00000375755 VPS13AQ96RL7 3174 aa12.02□□□□□ -0.49
MSH5-204ENST00000375755 EPHA4P54764 986 aa12.02□□□□□ -0.49
MSH5-204ENST00000375755 RAG2P55895 527 aa12.02□□□□□ -0.49
MSH5-204ENST00000375755 CDK3Q00526 305 aa12.02□□□□□ -0.49
MSH5-204ENST00000375755 TFF2Q03403 129 aa12.02□□□□□ -0.49
MSH5-204ENST00000375755 ETFDHQ16134 617 aa12.02□□□□□ -0.49
MSH5-204ENST00000375755 SLC25A35Q3KQZ1 300 aa12.02□□□□□ -0.49
MSH5-204ENST00000375755 FAM198BQ6UWH4 519 aa12.02□□□□□ -0.49
MSH5-204ENST00000375755 LRRC56Q8IYG6 542 aaPredicted RBP12.02□□□□□ -0.49
MSH5-204ENST00000375755 OR52N1Q8NH53 320 aa12.02□□□□□ -0.49
MSH5-204ENST00000375755 OR51Q1Q8NH59 317 aa12.02□□□□□ -0.49
MSH5-204ENST00000375755 OR56B4Q8NH76 319 aa12.02□□□□□ -0.49
MSH5-204ENST00000375755 GANCQ8TET4 914 aa12.02□□□□□ -0.49
MSH5-204ENST00000375755 RSPH9Q9H1X1 276 aaPredicted RBP12.02□□□□□ -0.49
MSH5-204ENST00000375755 DMRT3Q9NQL9 472 aa12.02□□□□□ -0.49
MSH5-204ENST00000375755 ING1Q9UK53 422 aaPredicted RBP12.02□□□□□ -0.49
MSH5-204ENST00000375755 PRAMEF27A3QJZ7 478 aa12.01□□□□□ -0.49
MSH5-204ENST00000375755 HMGN4O00479 90 aa12.01□□□□□ -0.49
MSH5-204ENST00000375755 SLC28A2O43868 658 aa12.01□□□□□ -0.49
MSH5-204ENST00000375755 WDPCPO95876 746 aa12.01□□□□□ -0.49
MSH5-204ENST00000375755 EGFP01133 1207 aa12.01□□□□□ -0.49
MSH5-204ENST00000375755 NPPBP16860 134 aa12.01□□□□□ -0.49
MSH5-204ENST00000375755 RPL3P39023 403 aaKnown RBP12.01□□□□□ -0.49
MSH5-204ENST00000375755 MAPK9P45984 424 aa12.01□□□□□ -0.49
MSH5-204ENST00000375755 SIM1P81133 766 aaPredicted RBP12.01□□□□□ -0.49
MSH5-204ENST00000375755 MLLT1Q03111 559 aaPredicted RBP12.01□□□□□ -0.49
MSH5-204ENST00000375755 SYPL1Q16563 259 aa12.01□□□□□ -0.49
MSH5-204ENST00000375755 TMEM196Q5HYL7 178 aa12.01□□□□□ -0.49
MSH5-204ENST00000375755 AADACL4Q5VUY2 407 aa12.01□□□□□ -0.49
MSH5-204ENST00000375755 ALKAL2Q6UX46 152 aa12.01□□□□□ -0.49
MSH5-204ENST00000375755 C17orf107Q6ZR85 190 aa12.01□□□□□ -0.49
MSH5-204ENST00000375755 OR56A3Q8NH54 315 aa12.01□□□□□ -0.49
MSH5-204ENST00000375755 THAP4Q8WY91 577 aa12.01□□□□□ -0.49
MSH5-204ENST00000375755 KCTD12Q96CX2 325 aaKnown RBP12.01□□□□□ -0.49
MSH5-204ENST00000375755 COX14Q96I36 57 aa12.01□□□□□ -0.49
MSH5-204ENST00000375755 UQCC2Q9BRT2 126 aa12.01□□□□□ -0.49
MSH5-204ENST00000375755 SAV1Q9H4B6 383 aaPredicted RBP12.01□□□□□ -0.49
MSH5-204ENST00000375755 PCDHB16Q9NRJ7 776 aa12.01□□□□□ -0.49
MSH5-204ENST00000375755 RPS6KB2Q9UBS0 482 aa12.01□□□□□ -0.49
MSH5-204ENST00000375755 FBXL2Q9UKC9 423 aa12.01□□□□□ -0.49
MSH5-204ENST00000375755 A0A0G2JK05 382 aa12.01□□□□□ -0.49
MSH5-204ENST00000375755 PLSCR5A0PG75 271 aa12.01□□□□□ -0.49
MSH5-204ENST00000375755 LINC01387J3KSC0 135 aa12.01□□□□□ -0.49
MSH5-204ENST00000375755 IGHA1P01876 353 aa12.01□□□□□ -0.49
MSH5-204ENST00000375755 TFP02787 698 aa12.01□□□□□ -0.49
MSH5-204ENST00000375755 FGF2P09038 288 aa12.01□□□□□ -0.49
MSH5-204ENST00000375755 ATP5A1P25705 553 aaKnown RBP12.01□□□□□ -0.49
MSH5-204ENST00000375755 GNA13Q14344 377 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms