RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 OR56B4Q8NH76 319 aa10.12□□□□□ -0.79
LCN2-202ENST00000372998 TRMT10AQ8TBZ6 339 aaKnown RBP10.12□□□□□ -0.79
LCN2-202ENST00000372998 ZNF431Q8TF32 576 aaPredicted RBP10.12□□□□□ -0.79
LCN2-202ENST00000372998 LCN9Q8WX39 176 aa10.12□□□□□ -0.79
LCN2-202ENST00000372998 ING5Q8WYH8 240 aa10.12□□□□□ -0.79
LCN2-202ENST00000372998 CDS1Q92903 461 aa10.12□□□□□ -0.79
LCN2-202ENST00000372998 HGDQ93099 445 aa10.12□□□□□ -0.79
LCN2-202ENST00000372998 UPRTQ96BW1 309 aa10.12□□□□□ -0.79
LCN2-202ENST00000372998 SMIM10Q96HG1 83 aa10.12□□□□□ -0.79
LCN2-202ENST00000372998 C10orf90Q96M02 699 aa10.12□□□□□ -0.79
LCN2-202ENST00000372998 GPR137Q96N19 417 aa10.12□□□□□ -0.79
LCN2-202ENST00000372998 ASB16Q96NS5 453 aa10.12□□□□□ -0.79
LCN2-202ENST00000372998 TEAD3Q99594 435 aa10.12□□□□□ -0.79
LCN2-202ENST00000372998 TRMT61BQ9BVS5 477 aaKnown RBP10.12□□□□□ -0.79
LCN2-202ENST00000372998 IFT27Q9BW83 186 aa10.12□□□□□ -0.79
LCN2-202ENST00000372998 B3GAT2Q9NPZ5 323 aa10.12□□□□□ -0.79
LCN2-202ENST00000372998 EQTNQ9NQ60 294 aa10.12□□□□□ -0.79
LCN2-202ENST00000372998 CTPS2Q9NRF8 586 aa10.12□□□□□ -0.79
LCN2-202ENST00000372998 APOBEC3BQ9UH17 382 aaKnown RBP10.12□□□□□ -0.79
LCN2-202ENST00000372998 HSPB11Q9Y547 144 aa10.12□□□□□ -0.79
LCN2-202ENST00000372998 CSNK1G3Q9Y6M4 447 aa10.12□□□□□ -0.79
LCN2-202ENST00000372998 CLCA3PQ9Y6N3 262 aa10.12□□□□□ -0.79
LCN2-202ENST00000372998 TRPM6Q9BX84 2022 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 CDHR4A6H8M9 788 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 LINC00862A6NCI5 91 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 SOCS6O14544 535 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 HRO43593 1189 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 SC5DO75845 299 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 ATP1B1P05026 303 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 CHRM5P08912 532 aaPredicted RBP10.11□□□□□ -0.79
LCN2-202ENST00000372998 CPMP14384 443 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 EPCAMP16422 314 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 POU3F3P20264 500 aaPredicted RBP10.11□□□□□ -0.79
LCN2-202ENST00000372998 SSTR4P31391 388 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 DRD3P35462 400 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 SOX18P35713 384 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 TNFRSF4P43489 277 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 OR3A3P47888 321 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 ZNF136P52737 540 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 METAP1P53582 386 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 P2RX3P56373 397 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 CAV3P56539 151 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 SCAND1P57086 179 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 SKP1P63208 163 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 POU6F2P78424 691 aaPredicted RBP10.11□□□□□ -0.79
LCN2-202ENST00000372998 HOXC5Q00444 222 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 CAMK2BQ13554 666 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 IL10RAQ13651 578 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 GGTLC2Q14390 218 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 NUMA1Q14980 2115 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 OR1Q1Q15612 314 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 ZNHIT3Q15649 155 aaPredicted RBP10.11□□□□□ -0.79
LCN2-202ENST00000372998 CCDC85BQ15834 202 aaPredicted RBP10.11□□□□□ -0.79
LCN2-202ENST00000372998 GAB4Q2WGN9 574 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 ACSM3Q53FZ2 586 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 EXOSC6Q5RKV6 272 aaKnown RBP10.11□□□□□ -0.79
LCN2-202ENST00000372998 DCST2Q5T1A1 773 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 DMKNQ6E0U4 476 aaPredicted RBP10.11□□□□□ -0.79
LCN2-202ENST00000372998 ANKRD54Q6NXT1 300 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 RPL22L1Q6P5R6 122 aaKnown RBP10.11□□□□□ -0.79
LCN2-202ENST00000372998 ARL9Q6T311 187 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 SHFQ7M4L6 423 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 KCTD20Q7Z5Y7 419 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 ZNF440Q8IYI8 595 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 SIRT6Q8N6T7 355 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 COX18Q8N8Q8 333 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 OR4M1Q8NGD0 313 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 TMEM255BQ8WV15 326 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 SNAPC3Q92966 411 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 PHF21AQ96BD5 680 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 ZNF707Q96C28 371 aaPredicted RBP10.11□□□□□ -0.79
LCN2-202ENST00000372998 BPIFA2Q96DR5 249 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 TM4SF19Q96DZ7 209 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 RBM18Q96H35 190 aaKnown RBP10.11□□□□□ -0.79
LCN2-202ENST00000372998 SENP5Q96HI0 755 aaPredicted RBP10.11□□□□□ -0.79
LCN2-202ENST00000372998 OR2M4Q96R27 311 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 PRSS27Q9BQR3 290 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 APOOQ9BUR5 198 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 LGR4Q9BXB1 951 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 AICDAQ9GZX7 198 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 TMEM168Q9H0V1 697 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 MTIF3Q9H2K0 278 aaKnown RBP10.11□□□□□ -0.79
LCN2-202ENST00000372998 OR51J1Q9H342 316 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.11□□□□□ -0.79
LCN2-202ENST00000372998 MALT1Q9UDY8 824 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 PCOLCE2Q9UKZ9 415 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 SPATA2Q9UM82 520 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 RASD1Q9Y272 281 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 GPR55Q9Y2T6 319 aaPredicted RBP10.11□□□□□ -0.79
LCN2-202ENST00000372998 GPSM3Q9Y4H4 160 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 ENTPD2Q9Y5L3 495 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 KCNE3Q9Y6H6 103 aa10.11□□□□□ -0.79
LCN2-202ENST00000372998 A0A0G2JMP0 313 aa10.1□□□□□ -0.79
LCN2-202ENST00000372998 LOC102723532A0A0G2JNH3 316 aa10.1□□□□□ -0.79
LCN2-202ENST00000372998 TEX13CA0A0J9YWL9 993 aa10.1□□□□□ -0.79
LCN2-202ENST00000372998 A0A0X1KG70 313 aa10.1□□□□□ -0.79
LCN2-202ENST00000372998 C2orf92A0A1B0GVN3 265 aa10.1□□□□□ -0.79
LCN2-202ENST00000372998 SHOXO15266 292 aa10.1□□□□□ -0.79
LCN2-202ENST00000372998 MID1O15344 667 aa10.1□□□□□ -0.79
LCN2-202ENST00000372998 APOL3O95236 402 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms