RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 A6NIZ1 184 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 MRPL33O75394 65 aaKnown RBP10.83□□□□□ -0.68
SYNE1-204ENST00000367248 PRH1P02810 166 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 CRABP1P29762 137 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 HTR3AP46098 478 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 TMBIM6P55061 237 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 RAP1BP61224 184 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 RAP1AP62834 184 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 SLC29A1Q99808 456 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 IER3IP1Q9Y5U9 82 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 NRG2O14511 850 aaPredicted RBP10.82□□□□□ -0.68
SYNE1-204ENST00000367248 IGHV3-9P01782 118 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 MTHFD2P13995 350 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 RPS5P46782 204 aaKnown RBP10.82□□□□□ -0.68
SYNE1-204ENST00000367248 GABARAPL2P60520 117 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 GABREP78334 506 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 GPLD1P80108 840 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 ADAM15Q13444 863 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 APOFQ13790 326 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 TECPR1Q7Z6L1 1165 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 ZBTB8BQ8NAP8 495 aaPredicted RBP10.82□□□□□ -0.68
SYNE1-204ENST00000367248 ANKK1Q8NFD2 765 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 ADAMTS16Q8TE57 1224 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 TRUB1Q8WWH5 349 aaKnown RBP10.82□□□□□ -0.68
SYNE1-204ENST00000367248 ELF4Q99607 663 aaPredicted RBP10.82□□□□□ -0.68
SYNE1-204ENST00000367248 FUZQ9BT04 418 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 OBP2BQ9NPH6 170 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 DUSP13Q9UII6 198 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 FBXO9Q9UK97 447 aaPredicted RBP10.82□□□□□ -0.68
SYNE1-204ENST00000367248 TMPRSS11EQ9UL52 423 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 SNX11Q9Y5W9 270 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 TMEM221A6NGB7 291 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 M0R296 226 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 MBTPS2O43462 519 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 DDAH2O95865 285 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 NKPD1Q17RQ9 610 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 TMPRSS12Q86WS5 348 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 VRK2Q86Y07 508 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 OR2T11Q8NH01 316 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 TREX2Q9BQ50 279 aaPredicted RBP10.82□□□□□ -0.68
SYNE1-204ENST00000367248 SLC30A2Q9BRI3 323 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 ACTR6Q9GZN1 396 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 MMP27Q9H306 513 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 AGPAT4Q9NRZ5 378 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 STOML2Q9UJZ1 356 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 DDX60Q8IY21 1712 aaKnown RBP10.82□□□□□ -0.68
SYNE1-204ENST00000367248 CTNSO60931 367 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 HRGP04196 525 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 SLC35E2P0CK97 266 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 UQCRC1P31930 480 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 IDUAP35475 653 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 MAGEA12P43365 314 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 FXYD6P3P58550 94 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 C18orf63Q68DL7 685 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 TMEM207Q6UWW9 146 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 URM1Q9BTM9 101 aaKnown RBP10.82□□□□□ -0.68
SYNE1-204ENST00000367248 DENRO43583 198 aaKnown RBP10.82□□□□□ -0.68
SYNE1-204ENST00000367248 UGT8Q16880 541 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 SPRED3Q2MJR0 410 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 XKR5Q6UX68 686 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 TMEM178AQ8NBL3 297 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 PLA2G2FQ9BZM2 168 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 TEX13CA0A0J9YWL9 993 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 BMP4P12644 408 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 GNRHRP30968 328 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 NEDD4LQ96PU5 975 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 TUBA1CQ9BQE3 449 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 MYH3P11055 1940 aa10.82□□□□□ -0.68
SYNE1-204ENST00000367248 ARID1BQ8NFD5 2236 aaPredicted RBP10.82□□□□□ -0.68
SYNE1-204ENST00000367248 HMX2A2RU54 273 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 FBP2O00757 339 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 RAD51DO75771 328 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 GABRA2P47869 451 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 S100A10P60903 97 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 ASTLQ6HA08 431 aaPredicted RBP10.81□□□□□ -0.68
SYNE1-204ENST00000367248 WBP2NLQ6ICG8 309 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 C16orf58Q96GQ5 468 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 SLC25A44Q96H78 314 aaPredicted RBP10.81□□□□□ -0.68
SYNE1-204ENST00000367248 MRPS2Q9Y399 296 aaKnown RBP10.81□□□□□ -0.68
SYNE1-204ENST00000367248 TAPBPO15533 448 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 HCRTR1O43613 425 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 CSO75390 466 aaKnown RBP10.81□□□□□ -0.68
SYNE1-204ENST00000367248 ACTL6BO94805 426 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 SORBS2O94875 1100 aaKnown RBP10.81□□□□□ -0.68
SYNE1-204ENST00000367248 OLFM2O95897 454 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 IFNA21P01568 189 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 TMEM225BP0DP42 221 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 FRKP42685 505 aaPredicted RBP10.81□□□□□ -0.68
SYNE1-204ENST00000367248 MOGQ16653 247 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 HYAL4Q2M3T9 481 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 ACOT12Q8WYK0 555 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 TAMM41Q96BW9 452 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 NT5DC2Q9H857 520 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 INIPQ9NRY2 104 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 NUDT21O43809 227 aaKnown RBP10.81□□□□□ -0.68
SYNE1-204ENST00000367248 FURINP09958 794 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 SELPLGQ14242 412 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 SLC48A1Q6P1K1 146 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 ZNF554Q86TJ5 538 aa10.81□□□□□ -0.68
SYNE1-204ENST00000367248 ZNF687Q8N1G0 1237 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms