RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 MAGEB3O15480 346 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 SDC3O75056 442 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 CH25HO95992 272 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 ZGLP1P0C6A0 271 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 BMP7P18075 431 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 MAKP20794 623 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 S100A5P33763 92 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 CRYBB2P43320 205 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 RFX3P48380 749 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 RPS3AP61247 264 aaKnown RBP13.75□□□□□ -0.21
GABPB1-202ENST00000359031 BTG2P78543 158 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 ATP1A4Q13733 1029 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 ZC3H14Q6PJT7 736 aaKnown RBP13.75□□□□□ -0.21
GABPB1-202ENST00000359031 HSDL2Q6YN16 418 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 MED25Q71SY5 747 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 ZNF614Q8N883 585 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 LSMEM1Q8N8F7 131 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 OR7G1Q8NGA0 311 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 OIT3Q8WWZ8 545 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 DNASE2BQ8WZ79 361 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 ABTB1Q969K4 478 aaPredicted RBP13.75□□□□□ -0.21
GABPB1-202ENST00000359031 BPIFA2Q96DR5 249 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 MVB12AQ96EY5 273 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 MROQ9BYG7 248 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 C6orf62Q9GZU0 229 aaPredicted RBP13.75□□□□□ -0.21
GABPB1-202ENST00000359031 OR10A5Q9H207 317 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 EXOSC4Q9NPD3 245 aaKnown RBP13.75□□□□□ -0.21
GABPB1-202ENST00000359031 GMEB2Q9UKD1 530 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 SSR3Q9UNL2 185 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 ERVK-19Q9WJR5 959 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 EXOGQ9Y2C4 368 aaKnown RBP13.75□□□□□ -0.21
GABPB1-202ENST00000359031 MMACHCQ9Y4U1 282 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 RIF1Q5UIP0 2472 aaKnown RBP13.75□□□□□ -0.21
GABPB1-202ENST00000359031 A0A1B0GWA3 101 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 SAGE2PA6NJ88 616 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 ZNF670-ZNF695F2Z2N8 137 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 HRKO00198 91 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 BHLHE40O14503 412 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 HCN1O60741 890 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 MAOAP21397 527 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 TBXA2RP21731 343 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 CD1CP29017 333 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 RNF144AP50876 292 aaPredicted RBP13.75□□□□□ -0.21
GABPB1-202ENST00000359031 ATP12AP54707 1039 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 BNC1Q01954 994 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 SRSF5Q13243 272 aaKnown RBP13.75□□□□□ -0.21
GABPB1-202ENST00000359031 DSG2Q14126 1118 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 ERV3-1Q14264 604 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.75□□□□□ -0.21
GABPB1-202ENST00000359031 ARMC4Q5T2S8 1044 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 CXXC5Q7LFL8 322 aaKnown RBP13.75□□□□□ -0.21
GABPB1-202ENST00000359031 LNX2Q8N448 690 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 RCBTB1Q8NDN9 531 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 PSD4Q8NDX1 1056 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 OR4N2Q8NGD1 307 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 C16orf52Q8NHV5 167 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 RNF217Q8TC41 542 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 GRHL3Q8TE85 626 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 CLDN23Q96B33 292 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 AHCYL2Q96HN2 611 aaKnown RBP13.75□□□□□ -0.21
GABPB1-202ENST00000359031 ZNF426Q9BUY5 554 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 ASPNQ9BXN1 380 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 SPRTNQ9H040 489 aaPredicted RBP13.75□□□□□ -0.21
GABPB1-202ENST00000359031 C20orf141Q9NUB4 165 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 UCKL1Q9NWZ5 548 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 FLRT3Q9NZU0 649 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 H2AFY2Q9P0M6 372 aaPredicted RBP13.75□□□□□ -0.21
GABPB1-202ENST00000359031 LRIT1Q9P2V4 623 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 KLHL3Q9UH77 587 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 DAPK2Q9UIK4 370 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 CBLCQ9ULV8 474 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 BAIAP2Q9UQB8 552 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 DTX4Q9Y2E6 619 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 CARD8Q9Y2G2 431 aa13.75□□□□□ -0.21
GABPB1-202ENST00000359031 A0A075B6Q4 140 aa13.74□□□□□ -0.21
GABPB1-202ENST00000359031 NUDT21O43809 227 aaKnown RBP13.74□□□□□ -0.21
GABPB1-202ENST00000359031 DUX1O43812 170 aa13.74□□□□□ -0.21
GABPB1-202ENST00000359031 IGHA1P01876 353 aa13.74□□□□□ -0.21
GABPB1-202ENST00000359031 IFNA16P05015 189 aa13.74□□□□□ -0.21
GABPB1-202ENST00000359031 TSPAN19P0C672 248 aa13.74□□□□□ -0.21
GABPB1-202ENST00000359031 LIMS3P0CW19 117 aa13.74□□□□□ -0.21
GABPB1-202ENST00000359031 LIMS4P0CW20 117 aa13.74□□□□□ -0.21
GABPB1-202ENST00000359031 CT45A8P0DMV1 189 aa13.74□□□□□ -0.21
GABPB1-202ENST00000359031 CT45A9P0DMV2 189 aa13.74□□□□□ -0.21
GABPB1-202ENST00000359031 BCKDHBP21953 392 aa13.74□□□□□ -0.21
GABPB1-202ENST00000359031 ETV6P41212 452 aa13.74□□□□□ -0.21
GABPB1-202ENST00000359031 ACAA2P42765 397 aaKnown RBP13.74□□□□□ -0.21
GABPB1-202ENST00000359031 SLC1A3P43003 542 aa13.74□□□□□ -0.21
GABPB1-202ENST00000359031 PGDP52209 483 aa13.74□□□□□ -0.21
GABPB1-202ENST00000359031 FXYD6P3P58550 94 aa13.74□□□□□ -0.21
GABPB1-202ENST00000359031 ZNF45Q02386 682 aa13.74□□□□□ -0.21
GABPB1-202ENST00000359031 TPBGQ13641 420 aa13.74□□□□□ -0.21
GABPB1-202ENST00000359031 CT45A2Q5DJT8 189 aa13.74□□□□□ -0.21
GABPB1-202ENST00000359031 LIPKQ5VXJ0 399 aa13.74□□□□□ -0.21
GABPB1-202ENST00000359031 SMARCD3Q6STE5 483 aa13.74□□□□□ -0.21
GABPB1-202ENST00000359031 LAPTM4BQ86VI4 370 aa13.74□□□□□ -0.21
GABPB1-202ENST00000359031 METTL27Q8N6F8 245 aaPredicted RBP13.74□□□□□ -0.21
GABPB1-202ENST00000359031 ZNF615Q8N8J6 731 aa13.74□□□□□ -0.21
GABPB1-202ENST00000359031 C7orf57Q8NEG2 295 aa13.74□□□□□ -0.21
GABPB1-202ENST00000359031 UFD1Q92890 307 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms