RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 ZNF23P17027 643 aa14.35□□□□□ -0.11
NECTIN1-202ENST00000340882 TCP1P17987 556 aaKnown RBP14.35□□□□□ -0.11
NECTIN1-202ENST00000340882 HSD3B2P26439 372 aa14.35□□□□□ -0.11
NECTIN1-202ENST00000340882 ELK4P28324 431 aa14.35□□□□□ -0.11
NECTIN1-202ENST00000340882 HSD17B3P37058 310 aa14.35□□□□□ -0.11
NECTIN1-202ENST00000340882 ZNF117Q03924 483 aa14.35□□□□□ -0.11
NECTIN1-202ENST00000340882 ACSM2AQ08AH3 577 aa14.35□□□□□ -0.11
NECTIN1-202ENST00000340882 RASGEF1BQ0VAM2 473 aa14.35□□□□□ -0.11
NECTIN1-202ENST00000340882 SWI5Q1ZZU3 235 aa14.35□□□□□ -0.11
NECTIN1-202ENST00000340882 IQCCQ4KMZ1 466 aa14.35□□□□□ -0.11
NECTIN1-202ENST00000340882 ARL13AQ5H913 290 aaPredicted RBP14.35□□□□□ -0.11
NECTIN1-202ENST00000340882 ACSM2BQ68CK6 577 aa14.35□□□□□ -0.11
NECTIN1-202ENST00000340882 GALNT18Q6P9A2 607 aa14.35□□□□□ -0.11
NECTIN1-202ENST00000340882 CBLN3Q6UW01 205 aa14.35□□□□□ -0.11
NECTIN1-202ENST00000340882 ZNF551Q7Z340 670 aaPredicted RBP14.35□□□□□ -0.11
NECTIN1-202ENST00000340882 SLC43A2Q8N370 569 aa14.35□□□□□ -0.11
NECTIN1-202ENST00000340882 ANKS4BQ8N8V4 417 aa14.35□□□□□ -0.11
NECTIN1-202ENST00000340882 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.35□□□□□ -0.11
NECTIN1-202ENST00000340882 OTUB1Q96FW1 271 aaPredicted RBP14.35□□□□□ -0.11
NECTIN1-202ENST00000340882 BPESC1Q9GZL8 116 aa14.35□□□□□ -0.11
NECTIN1-202ENST00000340882 C3orf14Q9HBI5 128 aa14.35□□□□□ -0.11
NECTIN1-202ENST00000340882 KLHL9Q9P2J3 617 aa14.35□□□□□ -0.11
NECTIN1-202ENST00000340882 TMEFF2Q9UIK5 374 aaPredicted RBP14.35□□□□□ -0.11
NECTIN1-202ENST00000340882 TRAF6Q9Y4K3 522 aa14.35□□□□□ -0.11
NECTIN1-202ENST00000340882 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.35□□□□□ -0.11
NECTIN1-202ENST00000340882 PMF1-BGLAPU3KQ54 211 aa14.35□□□□□ -0.11
NECTIN1-202ENST00000340882 A8MT66 165 aa14.34□□□□□ -0.11
NECTIN1-202ENST00000340882 NDUFS8O00217 210 aa14.34□□□□□ -0.11
NECTIN1-202ENST00000340882 CYTIPO60759 359 aa14.34□□□□□ -0.11
NECTIN1-202ENST00000340882 SMIM24O75264 130 aa14.34□□□□□ -0.11
NECTIN1-202ENST00000340882 SLITRK5O94991 958 aa14.34□□□□□ -0.11
NECTIN1-202ENST00000340882 KCNK2O95069 426 aa14.34□□□□□ -0.11
NECTIN1-202ENST00000340882 RBP1P09455 135 aa14.34□□□□□ -0.11
NECTIN1-202ENST00000340882 APOBEC3AP31941 199 aaPredicted RBP14.34□□□□□ -0.11
NECTIN1-202ENST00000340882 STX2P32856 288 aa14.34□□□□□ -0.11
NECTIN1-202ENST00000340882 NTF4P34130 210 aa14.34□□□□□ -0.11
NECTIN1-202ENST00000340882 SRP14P37108 136 aaKnown RBP14.34□□□□□ -0.11
NECTIN1-202ENST00000340882 MAGEA4P43358 317 aa14.34□□□□□ -0.11
NECTIN1-202ENST00000340882 SERPINB8P50452 374 aa14.34□□□□□ -0.11
NECTIN1-202ENST00000340882 CHRNB3Q05901 458 aa14.34□□□□□ -0.11
NECTIN1-202ENST00000340882 NAB1Q13506 487 aa14.34□□□□□ -0.11
NECTIN1-202ENST00000340882 UAP1Q16222 522 aaPredicted RBP14.34□□□□□ -0.11
NECTIN1-202ENST00000340882 SPIN4Q56A73 249 aa14.34□□□□□ -0.11
NECTIN1-202ENST00000340882 CCNJQ5T5M9 372 aa14.34□□□□□ -0.11
NECTIN1-202ENST00000340882 FAM71E1Q6IPT2 247 aa14.34□□□□□ -0.11
NECTIN1-202ENST00000340882 KLHL17Q6TDP4 642 aa14.34□□□□□ -0.11
NECTIN1-202ENST00000340882 TMEM151AQ8N4L1 468 aa14.34□□□□□ -0.11
NECTIN1-202ENST00000340882 SGMS2Q8NHU3 365 aa14.34□□□□□ -0.11
NECTIN1-202ENST00000340882 FBXO17Q96EF6 278 aa14.34□□□□□ -0.11
NECTIN1-202ENST00000340882 BHLHE41Q9C0J9 482 aaPredicted RBP14.34□□□□□ -0.11
NECTIN1-202ENST00000340882 TAS2R7Q9NYW3 318 aa14.34□□□□□ -0.11
NECTIN1-202ENST00000340882 NTMQ9P121 344 aa14.34□□□□□ -0.11
NECTIN1-202ENST00000340882 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.33□□□□□ -0.12
NECTIN1-202ENST00000340882 SLU7O95391 586 aaKnown RBP14.33□□□□□ -0.12
NECTIN1-202ENST00000340882 KRT6AP02538 564 aa14.33□□□□□ -0.12
NECTIN1-202ENST00000340882 KRT6BP04259 564 aa14.33□□□□□ -0.12
NECTIN1-202ENST00000340882 EIF1P41567 113 aaKnown RBP14.33□□□□□ -0.12
NECTIN1-202ENST00000340882 KRT6CP48668 564 aa14.33□□□□□ -0.12
NECTIN1-202ENST00000340882 COMPP49747 757 aaPredicted RBP14.33□□□□□ -0.12
NECTIN1-202ENST00000340882 RAC3P60763 192 aa14.33□□□□□ -0.12
NECTIN1-202ENST00000340882 SLC25A3Q00325 362 aa14.33□□□□□ -0.12
NECTIN1-202ENST00000340882 GUCY2DQ02846 1103 aa14.33□□□□□ -0.12
NECTIN1-202ENST00000340882 CLCQ05315 142 aa14.33□□□□□ -0.12
NECTIN1-202ENST00000340882 CALCOCO2Q13137 446 aa14.33□□□□□ -0.12
NECTIN1-202ENST00000340882 NDUFAF6Q330K2 333 aa14.33□□□□□ -0.12
NECTIN1-202ENST00000340882 ZNF100Q8IYN0 542 aa14.33□□□□□ -0.12
NECTIN1-202ENST00000340882 WDR31Q8NA23 367 aa14.33□□□□□ -0.12
NECTIN1-202ENST00000340882 SLC16A11Q8NCK7 471 aa14.33□□□□□ -0.12
NECTIN1-202ENST00000340882 GIMAP5Q96F15 307 aa14.33□□□□□ -0.12
NECTIN1-202ENST00000340882 ERP44Q9BS26 406 aa14.33□□□□□ -0.12
NECTIN1-202ENST00000340882 C1QTNF3Q9BXJ4 246 aa14.33□□□□□ -0.12
NECTIN1-202ENST00000340882 OCEL1Q9H607 264 aa14.33□□□□□ -0.12
NECTIN1-202ENST00000340882 MYNNQ9NPC7 610 aa14.33□□□□□ -0.12
NECTIN1-202ENST00000340882 GRID1Q9ULK0 1009 aa14.33□□□□□ -0.12
NECTIN1-202ENST00000340882 TMCO1Q9UM00 188 aa14.33□□□□□ -0.12
NECTIN1-202ENST00000340882 NPIPA5A0A0B4J1W7 369 aa14.32□□□□□ -0.12
NECTIN1-202ENST00000340882 LOC390937A0A1W2PQ73 354 aa14.32□□□□□ -0.12
NECTIN1-202ENST00000340882 CIB4A0PJX0 185 aa14.32□□□□□ -0.12
NECTIN1-202ENST00000340882 ZNF724A8MTY0 619 aa14.32□□□□□ -0.12
NECTIN1-202ENST00000340882 NPIPA7E9PJI5 369 aa14.32□□□□□ -0.12
NECTIN1-202ENST00000340882 ATP6V1G2-DDX39BF2Z307 99 aa14.32□□□□□ -0.12
NECTIN1-202ENST00000340882 CCDC188H7C350 402 aa14.32□□□□□ -0.12
NECTIN1-202ENST00000340882 ULK1O75385 1050 aa14.32□□□□□ -0.12
NECTIN1-202ENST00000340882 H6PDO95479 791 aa14.32□□□□□ -0.12
NECTIN1-202ENST00000340882 NPIPA8P0DM63 369 aa14.32□□□□□ -0.12
NECTIN1-202ENST00000340882 PRPS2P11908 318 aa14.32□□□□□ -0.12
NECTIN1-202ENST00000340882 PRKCAP17252 672 aa14.32□□□□□ -0.12
NECTIN1-202ENST00000340882 NTSP30990 170 aa14.32□□□□□ -0.12
NECTIN1-202ENST00000340882 MAGEA12P43365 314 aa14.32□□□□□ -0.12
NECTIN1-202ENST00000340882 PRKAG1P54619 331 aa14.32□□□□□ -0.12
NECTIN1-202ENST00000340882 ZNF763Q0D2J5 394 aa14.32□□□□□ -0.12
NECTIN1-202ENST00000340882 HSPB3Q12988 150 aa14.32□□□□□ -0.12
NECTIN1-202ENST00000340882 GABRA6Q16445 453 aa14.32□□□□□ -0.12
NECTIN1-202ENST00000340882 DUSP5Q16690 384 aa14.32□□□□□ -0.12
NECTIN1-202ENST00000340882 ZSWIM7Q19AV6 140 aa14.32□□□□□ -0.12
NECTIN1-202ENST00000340882 UNC50Q53HI1 259 aa14.32□□□□□ -0.12
NECTIN1-202ENST00000340882 FBXW9Q5XUX1 488 aa14.32□□□□□ -0.12
NECTIN1-202ENST00000340882 SSX8Q7RTT4 187 aa14.32□□□□□ -0.12
NECTIN1-202ENST00000340882 LSRQ86X29 649 aaPredicted RBP14.32□□□□□ -0.12
NECTIN1-202ENST00000340882 C3orf56Q8N813 242 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms