RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 RAB35Q15286 201 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 TSNAXIP1Q2TAA8 658 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 CR1LQ2VPA4 569 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 KLHL26Q53HC5 615 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 LGSNQ5TDP6 509 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 FBXW9Q5XUX1 488 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 KLC3Q6P597 504 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 RELL1Q8IUW5 271 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 LILRA2Q8N149 483 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 PTGR2Q8N8N7 351 aaPredicted RBP5.67□□□□□ -1.5
ITGB1-201ENST00000302278 LINC01356Q8N9X3 169 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 STACQ99469 402 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 ZNF747Q9BV97 191 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 BHLHE41Q9C0J9 482 aaPredicted RBP5.67□□□□□ -1.5
ITGB1-201ENST00000302278 RACGAP1Q9H0H5 632 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 PLK3Q9H4B4 646 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 OBP2BQ9NPH6 170 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 ZNF281Q9Y2X9 895 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.67□□□□□ -1.55e-8■■■■□ 22.3
ITGB1-201ENST00000302278 FAM187AA6NFU0 413 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 APEHP13798 732 aaKnown RBP5.67□□□□□ -1.5
ITGB1-201ENST00000302278 PRKCAP17252 672 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 PCMT1P22061 227 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 PRIM2P49643 509 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 FABP6P51161 128 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 CAV1Q03135 178 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 SPOCK1Q08629 439 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 ZNF763Q0D2J5 394 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 RIN1Q13671 783 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 TRADDQ15628 312 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 ZNHIT3Q15649 155 aaPredicted RBP5.67□□□□□ -1.5
ITGB1-201ENST00000302278 PDCD2Q16342 344 aaPredicted RBP5.67□□□□□ -1.5
ITGB1-201ENST00000302278 OR7E24Q6IFN5 339 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 LRRC17Q8N6Y2 441 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 CDRT4Q8N9R6 151 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 B4GALNT2Q8NHY0 566 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 NSUN5Q96P11 429 aaKnown RBP5.67□□□□□ -1.5
ITGB1-201ENST00000302278 UBQLN4Q9NRR5 601 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 ARMCX1Q9P291 453 aa5.67□□□□□ -1.5
ITGB1-201ENST00000302278 FREM1Q5H8C1 2179 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 GOLGA6L6A8MZA4 724 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 KCNK2O95069 426 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 ENO1P06733 434 aaKnown RBP5.66□□□□□ -1.5
ITGB1-201ENST00000302278 ME2P23368 584 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 P2RX1P51575 399 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 HILS1P60008 231 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 FOXF1Q12946 379 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 SCGB2A2Q13296 93 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 PDE7AQ13946 482 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 C3orf62Q6ZUJ4 267 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 LCA5Q86VQ0 697 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 CCDC25Q86WR0 208 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 PSMA8Q8TAA3 256 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 GPR119Q8TDV5 335 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 FBF1Q8TES7 1133 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 SELENOMQ8WWX9 145 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 SORCS2Q96PQ0 1159 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 KLHDC3Q9BQ90 382 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 SLC17A5Q9NRA2 495 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 PMF1-BGLAPU3KQ54 211 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 ARPC4-TTLL3A0A0A6YYG9 625 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 GXYLT2A0PJZ3 443 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 NDUFB5O43674 189 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 STAMBPO95630 424 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 ACP2P11117 423 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 LIMS1P48059 325 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 ZNF117Q03924 483 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 RASA2Q15283 850 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 TRIM46Q7Z4K8 759 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 NUP37Q8NFH4 326 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 OR4C3Q8NH37 302 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 RBM4Q9BWF3 364 aaKnown RBP5.66□□□□□ -1.5
ITGB1-201ENST00000302278 HOXD1Q9GZZ0 328 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 MOV10Q9HCE1 1003 aaKnown RBP5.66□□□□□ -1.5
ITGB1-201ENST00000302278 TAS2R16Q9NYV7 291 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 RNF14Q9UBS8 474 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 VDAC3Q9Y277 283 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 SPEF1Q9Y4P9 236 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 A0A096LPK6 155 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 H3BQF6 201 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 FZD7O75084 574 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 PIAS1O75925 651 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 ITGA5P08648 1049 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 PRPS2P11908 318 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 EDNRAP25101 427 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 FKBP2P26885 142 aaKnown RBP5.66□□□□□ -1.5
ITGB1-201ENST00000302278 SRSF2Q01130 221 aaKnown RBP5.66□□□□□ -1.5
ITGB1-201ENST00000302278 CD226Q15762 336 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 VPS26BQ4G0F5 336 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 TTC19Q6DKK2 380 aaPredicted RBP5.66□□□□□ -1.5
ITGB1-201ENST00000302278 TMEM107Q6UX40 140 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 IL17RELQ6ZVW7 336 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 MYLK4Q86YV6 388 aaPredicted RBP5.66□□□□□ -1.5
ITGB1-201ENST00000302278 MAGEE2Q8TD90 523 aaPredicted RBP5.66□□□□□ -1.5
ITGB1-201ENST00000302278 TMEM45BQ96B21 275 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 EXOSC8Q96B26 276 aaKnown RBP5.66□□□□□ -1.5
ITGB1-201ENST00000302278 L3HYPDHQ96EM0 354 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 MS4A4EQ96PG1 132 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 MRPL57Q9BQC6 102 aaKnown RBP5.66□□□□□ -1.5
ITGB1-201ENST00000302278 KATNB1Q9BVA0 655 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms