RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 PPM1AP35813 382 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 LIMS1P48059 325 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 FNTBP49356 437 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 AGFG1P52594 562 aaKnown RBP12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 ATXN7L3Q14CW9 347 aaPredicted RBP12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 YAF2Q8IY57 180 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 LRRC3BQ96PB8 259 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 CCDC3Q9BQI4 270 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 KRCC1Q9NPI7 259 aaPredicted RBP12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 GLTPQ9NZD2 209 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 HCN3Q9P1Z3 774 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 BRWD1Q9NSI6 2320 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 UNC119BA6NIH7 251 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 H2AFB2P0C5Z0 115 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 RAB3BP20337 219 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 ACADLP28330 430 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 TPBGQ13641 420 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 TOR2AQ5JU69 321 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 RANBP3LQ86VV4 465 aaPredicted RBP12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 SPERTQ8NA61 448 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 ACOT11Q8WXI4 607 aaPredicted RBP12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 METTL2AQ96IZ6 378 aaKnown RBP12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 HHIPL1Q96JK4 782 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 HHIPQ96QV1 700 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 OR14A2Q96R54 314 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 SEC22CQ9BRL7 303 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 OR52A5Q9H2C5 316 aa12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 NFKBIL1Q9UBC1 381 aaPredicted RBP12.4□□□□□ -0.42
TNFRSF21-201ENST00000296861 TRBV2A0A0J9YWF9 115 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 IRGMA1A4Y4 181 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 CDHR4A6H8M9 788 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 OTOL1A6NHN0 477 aaPredicted RBP12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 RFPL3O75679 317 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 RGS11O94810 467 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 PDGFAP04085 211 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 HK1P19367 917 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 BMP8BP34820 402 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 EPHA5P54756 1037 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 ZNF628Q5EBL2 1059 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 C1orf94Q6P1W5 598 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 BMP8AQ7Z5Y6 402 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 OR56A1Q8NGH5 318 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 RPLP0P6Q8NHW5 317 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 MRGPRX3Q96LB0 322 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 WDFY2Q96P53 400 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 NIPAL2Q9H841 368 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 SYNPO2LQ9H987 977 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 KCND3Q9UK17 655 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 HEATR5BQ9P2D3 2071 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 DOCK9Q9BZ29 2069 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 TRDV1A0A1B0GX56 115 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 OLFM2O95897 454 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 CPMP14384 443 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 P2RY2P41231 377 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 PRDX1Q06830 199 aaKnown RBP12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 ELAVL3Q14576 367 aaKnown RBP12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 LRRC37A5PQ49AS3 106 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 CNKSR3Q6P9H4 555 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 ENPP7Q6UWV6 458 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 CREB3L2Q70SY1 520 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 OR5K2Q8NHB8 316 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 SLC35A4Q96G79 324 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 SLC38A1Q9H2H9 487 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 PHPT1Q9NRX4 125 aaPredicted RBP12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 KCMF1Q9P0J7 381 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 ZNF346Q9UL40 294 aaKnown RBP12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 A8MVJ9 347 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 M0R233 179 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 SLC9A3R1O14745 358 aaPredicted RBP12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 ARPC1BO15143 372 aaKnown RBP12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 DPM1O60762 260 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 TCRBP04435 133 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 CTSAP10619 480 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 ATP5A1P25705 553 aaKnown RBP12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 SNTA1Q13424 505 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 TCTE3Q8IZS6 198 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 TSACCQ96A04 125 aaPredicted RBP12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 DERL3Q96Q80 235 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 TNFRSF13CQ96RJ3 184 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 PPIL1Q9Y3C6 166 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 OR10H1Q9Y4A9 318 aa12.39□□□□□ -0.43
TNFRSF21-201ENST00000296861 RP1P56715 2156 aa12.38□□□□□ -0.43
TNFRSF21-201ENST00000296861 A0A0G2JPF8 293 aa12.38□□□□□ -0.43
TNFRSF21-201ENST00000296861 TMEM129A0AVI4 362 aa12.38□□□□□ -0.43
TNFRSF21-201ENST00000296861 IDSB3KWA1 339 aa12.38□□□□□ -0.43
TNFRSF21-201ENST00000296861 HNRNPCL3B7ZW38 293 aa12.38□□□□□ -0.43
TNFRSF21-201ENST00000296861 FLRT2O43155 660 aa12.38□□□□□ -0.43
TNFRSF21-201ENST00000296861 DNAJB6O75190 326 aa12.38□□□□□ -0.43
TNFRSF21-201ENST00000296861 HNRNPCL4P0DMR1 293 aa12.38□□□□□ -0.43
TNFRSF21-201ENST00000296861 LIPCP11150 499 aa12.38□□□□□ -0.43
TNFRSF21-201ENST00000296861 TYRP1P17643 537 aa12.38□□□□□ -0.43
TNFRSF21-201ENST00000296861 ITGB7P26010 798 aa12.38□□□□□ -0.43
TNFRSF21-201ENST00000296861 TLX1P31314 330 aaPredicted RBP12.38□□□□□ -0.43
TNFRSF21-201ENST00000296861 VEGFCP49767 419 aa12.38□□□□□ -0.43
TNFRSF21-201ENST00000296861 RAB28P51157 221 aa12.38□□□□□ -0.43
TNFRSF21-201ENST00000296861 NDUFAF6Q330K2 333 aa12.38□□□□□ -0.43
TNFRSF21-201ENST00000296861 MRPL2Q5T653 305 aaKnown RBP12.38□□□□□ -0.43
TNFRSF21-201ENST00000296861 ALKAL2Q6UX46 152 aa12.38□□□□□ -0.43
TNFRSF21-201ENST00000296861 UBE3DQ7Z6J8 389 aa12.38□□□□□ -0.43
TNFRSF21-201ENST00000296861 PRSS58Q8IYP2 241 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms