RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 KIR2DL3P43628 341 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 GALK2Q01415 458 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 SSBP1Q04837 148 aaKnown RBP3.87□□□□□ -1.79
UBE4A-201ENST00000252108 SLAMF1Q13291 335 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 GK2Q14410 553 aaPredicted RBP3.87□□□□□ -1.79
UBE4A-201ENST00000252108 HSPB2Q16082 182 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 VASNQ6EMK4 673 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 PSRC1Q6PGN9 363 aaPredicted RBP3.87□□□□□ -1.79
UBE4A-201ENST00000252108 ARSKQ6UWY0 536 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 RFPL4BQ6ZWI9 263 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 OVCH1Q7RTY7 1134 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 LRRTM4Q86VH4 590 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 FTMTQ8N4E7 242 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 Q8N9G6 341 aaPredicted RBP3.87□□□□□ -1.79
UBE4A-201ENST00000252108 TSTD1Q8NFU3 115 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 OR6K2Q8NGY2 324 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 FANK1Q8TC84 345 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 FOXJ1Q92949 421 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 HGDQ93099 445 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 CCNL2Q96S94 520 aaPredicted RBP3.87□□□□□ -1.79
UBE4A-201ENST00000252108 ALG8Q9BVK2 526 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 SLC35C2Q9NQQ7 365 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 COLEC10Q9Y6Z7 277 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 TRAV1-2A0A0B4J238 106 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 A8MU76 341 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 FABP7O15540 132 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 ERAL1O75616 437 aaKnown RBP3.87□□□□□ -1.79
UBE4A-201ENST00000252108 IL5P05113 134 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 GCGRP47871 477 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 AVPR1BP47901 424 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 CCR9P51686 369 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 ACTBP60709 375 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 RPS25P62851 125 aaKnown RBP3.87□□□□□ -1.79
UBE4A-201ENST00000252108 ACTG1P63261 375 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 PON3Q15166 354 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 TAF13Q15543 124 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 LPCAT3Q6P1A2 487 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 TEX261Q6UWH6 196 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 WASH2PQ6VEQ5 465 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 LIPIQ6XZB0 460 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 ERN2Q76MJ5 926 aaKnown RBP3.87□□□□□ -1.79
UBE4A-201ENST00000252108 NRROSQ86YC3 692 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 NAXDQ8IW45 347 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 TIGD4Q8IY51 512 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 ZNF440Q8IYI8 595 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 ZNF680Q8NEM1 530 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 OR4D11Q8NGI4 311 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 OR2T35Q8NGX2 323 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 SCARB1Q8WTV0 552 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 SGTBQ96EQ0 304 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 ZFP3Q96NJ6 502 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 NEDD4LQ96PU5 975 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 ZNF559Q9BR84 538 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 TRIM2Q9C040 744 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 SLC6A16Q9GZN6 736 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 PCDHB16Q9NRJ7 776 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 NUDT15Q9NV35 164 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 MED9Q9NWA0 146 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 MGAT4CQ9UBM8 478 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 MUTYHQ9UIF7 546 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 TMEM14AQ9Y6G1 99 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 U3KQ87 197 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 CCDC88CQ9P219 2028 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 TRIOO75962 3097 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 TRBV4-1A0A0J9YWV2 114 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 A0A1B0GUH1 482 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 EIF1AYO14602 144 aaKnown RBP3.87□□□□□ -1.79
UBE4A-201ENST00000252108 TSPAN6O43657 245 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 OR1F1O43749 312 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 RBBP9O75884 186 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 EGFP01133 1207 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 RAB3AP20336 220 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 ZP3P21754 424 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 APEX1P27695 318 aaKnown RBP3.87□□□□□ -1.79
UBE4A-201ENST00000252108 BSGP35613 385 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 EIF1AXP47813 144 aaKnown RBP3.87□□□□□ -1.79
UBE4A-201ENST00000252108 ERVFC1P60507 584 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 FLI1Q01543 452 aaPredicted RBP3.87□□□□□ -1.79
UBE4A-201ENST00000252108 RBPJQ06330 500 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 FHL1Q13642 323 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 FGFBP1Q14512 234 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 ELFN2Q5R3F8 820 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 FAM205BPQ63HN1 556 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 MRM1Q6IN84 353 aaKnown RBP3.87□□□□□ -1.79
UBE4A-201ENST00000252108 ZNF550Q7Z398 422 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 SPRED2Q7Z698 418 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 KLBQ86Z14 1044 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 IZUMO1Q8IYV9 350 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 CMTM8Q8IZV2 173 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 FAM98AQ8NCA5 519 aaKnown RBP3.87□□□□□ -1.79
UBE4A-201ENST00000252108 OR5W2Q8NH69 310 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 BRIX1Q8TDN6 353 aaKnown RBP3.87□□□□□ -1.79
UBE4A-201ENST00000252108 SLC38A5Q8WUX1 472 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 SUSD6Q92537 303 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 CNOT9Q92600 299 aaKnown RBP3.87□□□□□ -1.79
UBE4A-201ENST00000252108 KAT2AQ92830 837 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 ACTRT3Q9BYD9 372 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 CTPS2Q9NRF8 586 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 MLXQ9UH92 298 aa3.87□□□□□ -1.79
UBE4A-201ENST00000252108 CES1P1Q9UKY3 287 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms