RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 NKG7Q16617 165 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.11□□□□□ -0.47
VAMP4-201ENST00000236192 AWAT2Q6E213 333 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 Q6ZSR9 355 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 USP53Q70EK8 1073 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 ZNF610Q8N9Z0 462 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 BBS10Q8TAM1 723 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 ADAD1Q96M93 576 aaKnown RBP12.11□□□□□ -0.47
VAMP4-201ENST00000236192 TMEM39BQ9GZU3 492 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 TNFRSF12AQ9NP84 129 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 SEMA4GQ9NTN9 838 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 DNMT3BQ9UBC3 853 aaKnown RBP12.11□□□□□ -0.47
VAMP4-201ENST00000236192 GABARAPH6UMI1 98 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 GPR39O43194 453 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 TAGLN2P37802 199 aaKnown RBP12.11□□□□□ -0.47
VAMP4-201ENST00000236192 WNT7BP56706 349 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 TAS2R19P59542 299 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 UBXN2BQ14CS0 331 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 NCMAPQ5T1S8 102 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 RANBP10Q6VN20 620 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 TMEM150AQ86TG1 271 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 OR5M9Q8NGP3 310 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 HMGCLL1Q8TB92 370 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 HGDQ93099 445 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 RNF19AQ9NV58 838 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 FAM198AQ9UFP1 575 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 ZNF780BQ9Y6R6 833 aa12.11□□□□□ -0.47
VAMP4-201ENST00000236192 PDHXO00330 501 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 POP7O75817 140 aaKnown RBP12.1□□□□□ -0.47
VAMP4-201ENST00000236192 NSG1P42857 185 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 KCTD11Q693B1 232 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 TIPARPQ7Z3E1 657 aaKnown RBP12.1□□□□□ -0.47
VAMP4-201ENST00000236192 OR2W3Q7Z3T1 314 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 CACUL1Q86Y37 369 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 KCNRGQ8N5I3 272 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 OR4F15Q8NGB8 312 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 OR6J1Q8NGC5 347 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 POM121Q96HA1 1249 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 ZNF354BQ96LW1 612 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 LRFN1Q9P244 771 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.1□□□□□ -0.47
VAMP4-201ENST00000236192 M0QZK8 103 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 GGCTO75223 188 aaKnown RBP12.1□□□□□ -0.47
VAMP4-201ENST00000236192 C6P13671 934 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 FABP4P15090 132 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 CCR8P51685 355 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 ZXDBP98169 803 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 FABP5Q01469 135 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 FAM98CQ17RN3 349 aaKnown RBP12.1□□□□□ -0.47
VAMP4-201ENST00000236192 C18orf21Q32NC0 220 aaPredicted RBP12.1□□□□□ -0.47
VAMP4-201ENST00000236192 ABCA11PQ4W5N1 156 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 PARGQ86W56 976 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 VRK3Q8IV63 474 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 CCDC116Q8IYX3 515 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 CXorf40BQ96DE9 158 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 MS4A3Q96HJ5 214 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 SEC22AQ96IW7 307 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 CCNL2Q96S94 520 aaPredicted RBP12.1□□□□□ -0.47
VAMP4-201ENST00000236192 PRRT1Q99946 306 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 SEC11CQ9BY50 192 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 FBXL21Q9UKT6 434 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 PCYT1BQ9Y5K3 369 aaPredicted RBP12.1□□□□□ -0.47
VAMP4-201ENST00000236192 UNC119BA6NIH7 251 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 C22orf31O95567 290 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 IL5P05113 134 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 BMP8BP34820 402 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 AHRP35869 848 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 SOX2P48431 317 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 MOGAT2Q3SYC2 334 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 BMP8AQ7Z5Y6 402 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 GPC2Q8N158 579 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 OR4K17Q8NGC6 315 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 LGALS14Q8TCE9 139 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 CHRDQ9H2X0 955 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 RHOFQ9HBH0 211 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 PLEKHB1Q9UF11 243 aaPredicted RBP12.1□□□□□ -0.47
VAMP4-201ENST00000236192 ZNF214Q9UL59 606 aaPredicted RBP12.1□□□□□ -0.47
VAMP4-201ENST00000236192 RFPL4AA6NLU0 287 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 RFPL4AL1F8VTS6 287 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 K7EPK0 472 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 IFNA1P01562 189 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 ITGB8P26012 769 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 MMP15P51511 669 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 LIMK1P53667 647 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 CAMK2DQ13557 499 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 LIPJQ5W064 366 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 REC114Q7Z4M0 266 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 MFSD6LQ8IWD5 586 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 FAM185AQ8N0U4 392 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 FAM71E2Q8N5Q1 922 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 CORO2AQ92828 525 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 COL26A1Q96A83 441 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 OR14A2Q96R54 314 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 CLSTN3Q9BQT9 956 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 FZD8Q9H461 694 aa12.1□□□□□ -0.47
VAMP4-201ENST00000236192 A0A1W2PS29 197 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 TMEM200CA6NKL6 621 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 ZAR1LA6NP61 321 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 FBXO24O75426 580 aa12.09□□□□□ -0.47
VAMP4-201ENST00000236192 SDC1P18827 310 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms