RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 OR13C2Q8NGS9 318 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 OR52N1Q8NH53 320 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 NACC2Q96BF6 587 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 ZNF285Q96NJ3 590 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 SECISBP2Q96T21 854 aaKnown RBP7.64□□□□□ -1.19
VAMP3-201ENST00000054666 SLC30A2Q9BRI3 323 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 RERGLQ9H628 205 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 ATP13A2Q9NQ11 1180 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 C20orf141Q9NUB4 165 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 TXNL4BQ9NX01 149 aaKnown RBP7.64□□□□□ -1.19
VAMP3-201ENST00000054666 DNAJB12Q9NXW2 375 aaKnown RBP7.64□□□□□ -1.19
VAMP3-201ENST00000054666 GMEB2Q9UKD1 530 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 CBLCQ9ULV8 474 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 BAIAP2Q9UQB8 552 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 CACNA1IQ9P0X4 2223 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 DNAH14Q0VDD8 3507 aa7.64□□□□□ -1.19
VAMP3-201ENST00000054666 SLC22A31A6NKX4 558 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 TMEM150CB9EJG8 249 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 PRR23D1E9PI22 279 aaPredicted RBP7.63□□□□□ -1.19
VAMP3-201ENST00000054666 TGFBR3LH3BV60 316 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 BHLHE40O14503 412 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 SOCS6O14544 535 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 SDC3O75056 442 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 CDRT1O95170 752 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 LYPD3O95274 346 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 SLC2A10O95528 541 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 IFNGP01579 166 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 IGHA1P01876 353 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 LIMS3P0CW19 117 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 LIMS4P0CW20 117 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 PRR23D2P0DMB1 279 aaPredicted RBP7.63□□□□□ -1.19
VAMP3-201ENST00000054666 MAOAP21397 527 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 TGM1P22735 817 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 RPS19P39019 145 aaKnown RBP7.63□□□□□ -1.19
VAMP3-201ENST00000054666 FNTBP49356 437 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 ATP12AP54707 1039 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 NXPH1P58417 271 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 DNASE1L3Q13609 305 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 TPBGQ13641 420 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 ERV3-1Q14264 604 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 FGFBP1Q14512 234 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 ZNF141Q15928 474 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 NNATQ16517 81 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 C22orf42Q6IC83 251 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 NIPAL3Q6P499 406 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 TMPRSS11AQ6ZMR5 421 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 LHFPL3Q86UP9 236 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 SLC22A16Q86VW1 577 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 CADM2Q8N3J6 435 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 LNX2Q8N448 690 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 POC5Q8NA72 575 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 BBS1Q8NFJ9 593 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 OR4N2Q8NGD1 307 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 OR51G2Q8NGK0 314 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 OR51Q1Q8NH59 317 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 OR4C6Q8NH72 309 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 AP3S1Q92572 193 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 TMEM203Q969S6 136 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 C1GALT1C1Q96EU7 318 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 TRMT61AQ96FX7 289 aaKnown RBP7.63□□□□□ -1.19
VAMP3-201ENST00000054666 PTCHD1Q96NR3 888 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 ARHGAP9Q9BRR9 750 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 CCDC32Q9BV29 185 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 YIPF2Q9BWQ6 316 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 FOXQ1Q9C009 403 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 CHRNA10Q9GZZ6 450 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 OR10A5Q9H207 317 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 SP140LQ9H930 580 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 CMC2Q9NRP2 79 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 EXOGQ9Y2C4 368 aaKnown RBP7.63□□□□□ -1.19
VAMP3-201ENST00000054666 UGT2A1Q9Y4X1 527 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 TRAV27A0A087WT01 109 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 IGHV5-51A0A0C4DH38 117 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 IQCMA0A1B0GVH7 501 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 FAM183AA6NL82 134 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 CSTAP01040 98 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 IGKV1D-16P01601 117 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 ZGLP1P0C6A0 271 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 NOS3P29474 1203 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 SLC6A6P31641 620 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 GPR3P46089 330 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 GPR143P51810 404 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 SLC16A1P53985 500 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 RPS25P62851 125 aaKnown RBP7.63□□□□□ -1.19
VAMP3-201ENST00000054666 BTG2P78543 158 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 MXD1Q05195 221 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 HNRNPA0Q13151 305 aaKnown RBP7.63□□□□□ -1.19
VAMP3-201ENST00000054666 ZNF791Q3KP31 576 aaPredicted RBP7.63□□□□□ -1.19
VAMP3-201ENST00000054666 CRTC2Q53ET0 693 aaPredicted RBP7.63□□□□□ -1.19
VAMP3-201ENST00000054666 KLHL12Q53G59 568 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 SLC35F1Q5T1Q4 408 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 PRPF38BQ5VTL8 546 aaKnown RBP7.63□□□□□ -1.19
VAMP3-201ENST00000054666 ARHGAP11AQ6P4F7 1023 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 ULK3Q6PHR2 472 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 NPSR1Q6W5P4 371 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 QSOX2Q6ZRP7 698 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 MEPCEQ7L2J0 689 aaKnown RBP7.63□□□□□ -1.19
VAMP3-201ENST00000054666 OAFQ86UD1 273 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 CCDC190Q86UF4 302 aa7.63□□□□□ -1.19
VAMP3-201ENST00000054666 C17orf82Q86X59 251 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms