RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 ACP2P11117 423 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 FBLP22087 321 aaKnown RBP5.74□□□□□ -1.49
VPS13D-201ENST00000011700 APLNRP35414 380 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 ACY1Q03154 408 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 MICAQ29983 383 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 EMC4Q5J8M3 183 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 WBP2NLQ6ICG8 309 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 PODNL1Q6PEZ8 512 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 CFAP52Q8N1V2 620 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 C4orf32Q8N8J7 132 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 ZNF610Q8N9Z0 462 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 ANKRD9Q96BM1 317 aaPredicted RBP5.74□□□□□ -1.49
VPS13D-201ENST00000011700 FAM46AQ96IP4 442 aaKnown RBP5.74□□□□□ -1.49
VPS13D-201ENST00000011700 LPAR4Q99677 370 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 MAN2C1Q9NTJ4 1040 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 SLC35D1Q9NTN3 355 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 MARF1Q9Y4F3 1742 aaKnown RBP5.74□□□□□ -1.49
VPS13D-201ENST00000011700 TRAV6A0A075B6T7 132 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 OR7A17O14581 309 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 EIF1BO60739 113 aaKnown RBP5.74□□□□□ -1.49
VPS13D-201ENST00000011700 ZNF28P17035 718 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 KIAA1024LP59773 190 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 KCNAB2Q13303 367 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 PPP1R3AQ16821 1122 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 RTL8BQ17RB0 113 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 C22orf39Q6P5X5 142 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 SPRED1Q7Z699 444 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 CISD2Q8N5K1 135 aaKnown RBP5.74□□□□□ -1.49
VPS13D-201ENST00000011700 OR51A2Q8NGJ7 313 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 OR51G2Q8NGK0 314 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 OR1S1Q8NH92 325 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 SBF2Q86WG5 1849 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 SNNO75324 88 aaPredicted RBP5.74□□□□□ -1.49
VPS13D-201ENST00000011700 PTPN6P29350 595 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 CD97P48960 835 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 SELENOWP63302 87 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 SMAGPQ0VAQ4 97 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 FUT2Q10981 343 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 HEPHL1Q6MZM0 1159 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 OR52P1PQ8NH57 321 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 GNPNAT1Q96EK6 184 aaPredicted RBP5.74□□□□□ -1.49
VPS13D-201ENST00000011700 INTS14Q96SY0 518 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 GJD2Q9UKL4 321 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 PPM1HQ9ULR3 514 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 NBASA2RRP1 2371 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 KIR2DS1A0A191URI9 304 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 J3KR12 359 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 BRINP1O60477 761 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 SELEP16581 610 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 ZNF16P17020 682 aaPredicted RBP5.74□□□□□ -1.49
VPS13D-201ENST00000011700 KIR2DS4P43632 304 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 PTH2RP49190 550 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 GATMP50440 423 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 DGKQP52824 942 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 GALEQ14376 348 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 KIR2DS1Q14954 304 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 FAM122CQ6P4D5 195 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 CACUL1Q86Y37 369 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 KLHDC7BQ96G42 594 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 SFXN1Q9H9B4 322 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 PRTFDC1Q9NRG1 225 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 VNN3Q9NY84 501 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 PTPRDP23468 1912 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 MN1Q10571 1320 aaPredicted RBP5.74□□□□□ -1.49
VPS13D-201ENST00000011700 TVP23AA6NH52 213 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 MSTNO14793 375 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 PPP1R2P9O14990 202 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 PMS2P2O95744 297 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 PIRTP0C851 137 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 RAB13P51153 203 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 PLCXD2Q0VAA5 305 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 DNASE1L3Q13609 305 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 BAK1Q16611 211 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 TMEM201Q5SNT2 666 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 OR2L13Q8N349 312 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 CLIP4Q8N3C7 705 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 OR52B6Q8NGF0 335 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 ZNF566Q969W8 418 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 PCED1AQ9H1Q7 454 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 RIMS4Q9H426 269 aaPredicted RBP5.74□□□□□ -1.49
VPS13D-201ENST00000011700 MPPED1O15442 326 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 IGHG1P01857 330 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 AHSGP02765 367 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 AMY2AP04746 511 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 EDN1P05305 212 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 EIF4EP06730 217 aaKnown RBP5.74□□□□□ -1.49
VPS13D-201ENST00000011700 TAS2R38P59533 333 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 TPBGQ13641 420 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 GRINAQ7Z429 371 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 OR5W2Q8NH69 310 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 COPS9Q8WXC6 57 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 CIB3Q96Q77 187 aaPredicted RBP5.74□□□□□ -1.49
VPS13D-201ENST00000011700 GALNT9Q9HCQ5 603 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 DCAF13Q9NV06 445 aaKnown RBP5.74□□□□□ -1.49
VPS13D-201ENST00000011700 H7BY64 318 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 PSMD9O00233 223 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 RFXAPO00287 272 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 ATP1B3P54709 279 aa5.74□□□□□ -1.49
VPS13D-201ENST00000011700 EEF1A1P68104 462 aaKnown RBP5.74□□□□□ -1.49
VPS13D-201ENST00000011700 GPR17Q13304 367 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms