RNA–Protein interactions for RNA: ENSMUST00000110505.7

Hmgb1-203, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,720 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-203ENSMUST00000110505 Ldlrad3A2AR95 345 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 TmppeD3Z286 447 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Gm3149E9PW52 257 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Vmn2r114E9Q281 856 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Gm3476K7N6V0 257 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Gm8362K7N6Y6 257 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Gm17026K7N6Z0 213 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Matn2O08746 956 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Ikzf3O08900 507 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 AmacrO09174 381 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 H2-Q1O19441 368 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Klf10O89091 479 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Mtatp6P00848 226 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Hoxb9P20615 250 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 PpargP37238 505 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Atp6v1e1P50518 226 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Opn1swP51491 346 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 KapP61110 121 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Tbpl1P62340 186 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 S100a13P97352 98 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Ccdc106Q3ULM0 279 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Naa11Q3UX61 218 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Trav6-2Q5R1I4 113 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 4930512M02RikQ5SQK8 218 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Ccdc92bQ5SUE3 299 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Tlx2Q61663 284 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 PrkciQ62074 595 aaKnown RBP3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Klra3Q64329 266 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Syn2Q64332 586 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 IppkQ6P1C1 489 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Gpr75Q6X632 540 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Fbxo5Q7TSG3 421 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Got1l1Q7TSV6 404 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Pcid2Q8BFV2 399 aaKnown RBP3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Cnot10Q8BH15 744 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Pggt1bQ8BUY9 377 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Fem1abQ8C0T1 654 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Fam46bQ8C152 427 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Q8C1R3 189 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Vmn1r22Q8R2D1 302 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Olfr1330Q8VEY6 315 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Olfr1090Q8VGA6 313 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Olfr352Q8VGJ9 315 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Rbm42Q91V81 474 aaKnown RBP3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Acsm1Q91VA0 573 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Thyn1Q91YJ3 226 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Senp2Q91ZX6 588 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Sectm1aQ921W8 192 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Pdia5Q921X9 517 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Abhd14aQ922Q6 247 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Cyp2j9Q924D1 502 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Gnl2Q99LH1 728 aaKnown RBP3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Scd3Q99PL7 359 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Ogfod2Q9CQ04 349 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 FopnlQ9CZS3 174 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Fam114a1Q9D281 569 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Shisa5Q9D7I0 235 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Ifi35Q9D8C4 286 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Snx5Q9D8U8 404 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Llcfc1Q9D9P8 108 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 RgccQ9DBX1 137 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Pop7Q9DCH2 140 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Wwtr1Q9EPK5 395 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Chrm2Q9ERZ4 466 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Slc15a1Q9JIP7 709 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Cetn2Q9R1K9 172 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Plek2Q9WV52 353 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Ap1m2Q9WVP1 423 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 FcgbpE9Q0B5 2583 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Dock7Q8R1A4 2130 aaKnown RBP3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Heatr5bQ8C547 2070 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Ank2Q8C8R3 3898 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Zfp462B1AWL2 2495 aaKnown RBP3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Ice1E9Q286 2241 aaKnown RBP3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Lekr1B2RVN1 116 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Tarm1B6A8R8 288 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Tmed7D3YZZ5 224 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Wdr25E9Q349 535 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Zfp619G3X9T2 1161 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Vmn2r97K7N6Z2 861 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Olfr237-ps1K9J725 310 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Ascl4M0QW46 144 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 NlkO54949 527 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Pja1O55176 578 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 St3gal5O88829 414 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Ca2P00920 260 aaKnown RBP3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 WapP01173 134 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 P01673 111 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Nat1P50294 290 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Fgf1P61148 155 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Rps15aP62245 130 aaKnown RBP3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Tsc22d1P62500 1077 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Rpl22P67984 128 aaKnown RBP3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Ext1P97464 746 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Pou1f1Q00286 291 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 SctQ08535 133 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Cpne9Q1RLL3 553 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Tmem248Q3TBN1 314 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Ccdc127Q3TC33 260 aa3.87□□□□□ -1.79
Hmgb1-203ENSMUST00000110505 Hp1bp3Q3TEA8 554 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms