RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Rasd1O35626 280 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Pcdh12O55134 1180 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 RhoP15409 348 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Sstr2P30875 369 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Cdh10P70408 788 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Fam46cQ5SSF7 391 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 E2f1Q61501 430 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 EngQ63961 653 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Trim46Q7TNM2 759 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Cmtr2Q8BWQ4 767 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 FgbQ8K0E8 481 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Lgi4Q8K1S1 537 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 NagsQ8R4H7 527 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr1Q8VGI1 314 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr808Q8VGI8 312 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Dcbld2Q91ZV3 769 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Cops7aQ9CZ04 275 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 HhatlQ9D1G3 503 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Get4Q9D1H7 327 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Sgk3Q9ERE3 496 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Ntn4Q9JI33 628 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Dnajb1Q9QYJ3 340 aaKnown RBP9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Cacna1bO55017 2327 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Gm436B1AVU6 407 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr172E9Q8F6 309 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Vmn1r55E9Q8I6 310 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Vmn2r75G5E8Z7 853 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Vmn2r99H3BK37 856 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 MbpP04370 250 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Nid1P10493 1245 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 AcadmP45952 421 aaKnown RBP9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 ArntP53762 791 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Cdk10Q3UMM4 360 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Eml4Q3UMY5 988 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Arhgef4Q7TNR9 484 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Slc34a3Q80SU6 601 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Slc36a2Q8BHK3 478 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Cldn17Q8BXA6 224 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 GatcQ8CBY0 155 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Mnd1Q8K396 205 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr1491Q8VEZ5 319 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr164Q8VF87 315 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr120Q8VFQ2 330 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr656Q8VGX9 329 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 TipinQ91WA1 278 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Itfg2Q91WI7 443 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 TMEM121BQ99MX7 572 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 NpvfQ9ESQ8 188 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Mpeg1A1L314 713 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Cyp4a32A2A8T1 509 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Ttc39aA2ACP1 578 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Spats1A2RRY8 269 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Cd209fD3Z1H5 274 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Vmn1r169L7N275 304 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 HgdO09173 445 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Hoxa4P06798 285 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 F9P16294 471 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Tcea3P23881 347 aaKnown RBP9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 GalP47212 124 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Aqp2P56402 271 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Adamts15P59384 950 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Ap2s1P62743 142 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Il10raQ61727 575 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Pcp4l1Q6W8Q3 68 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Tha1Q6XPS7 400 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Acsm4Q80W40 580 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Ptbp3Q8BHD7 523 aaKnown RBP9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Mfsd11Q8BJ51 449 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Slc35c1Q8BLX4 363 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Tmem17Q8K0U3 198 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr771Q8VFH6 317 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr444Q8VFS6 310 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Odf4Q8VI88 290 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Rpe65Q91ZQ5 533 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 TpbpbQ9CQC0 121 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Gabra4Q9D6F4 552 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr938Q9EQ93 315 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Clca3a2Q9EQR4 902 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Btnl10Q9JK39 275 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 4930433I11RikA0A0U1RPT6 723 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Gm11758A2BEI6 360 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Gm11757A2BEI8 360 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Tnfrsf25B1AWN9 411 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Gm5799E9Q2M1 201 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Gm609E9Q573 300 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Gm5407E9Q7Q1 248 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Slc22a1O08966 556 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 P03987 398 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 ChrneP20782 493 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Ido1P28776 407 aaKnown RBP9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Hnrnpa1P49312 320 aaKnown RBP9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Pydc3Q3V3Q4 588 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 HlxQ61670 476 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Rcbtb1Q6NXM2 531 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Ranbp3lQ6PDH4 491 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Pum2Q80U58 1066 aaKnown RBP9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Trmt12Q8BG71 446 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Poldip3Q8BG81 420 aaKnown RBP9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Znf689Q8BKK5 500 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Mettl21eQ8CDZ2 244 aa9.12□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 35.1 ms