RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Wdfy2Q8BUB4 400 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Stfa2l1Q8BWM3 103 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Rad51ap1Q8C551 337 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Lgi4Q8K1S1 537 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Art3Q8R2G4 371 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Col26a1Q91VF6 440 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 CrebzfQ91ZR3 358 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Sec13Q9D1M0 322 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Olfr44Q9EQB8 314 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Wdfy3Q6VNB8 3508 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Olfr1315-ps1A0A140LI66 314 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Gm6619F6URP1 175 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Amd1P0DMN7 334 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Pcp2P12660 120 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Tcea3P23881 347 aaKnown RBP15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 TtkP35761 856 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Elk1P41969 429 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Q3USZ8 430 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Cnrip1Q5M8N0 164 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Slc35f1Q8BGK5 408 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Gpr152Q8BXS7 511 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Olfr1316Q8VG12 314 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Asb8Q91ZT9 288 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Cyp2u1Q9CX98 530 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Slc52a3Q9D6X5 460 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Natd1Q9DBW3 110 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 B3galt5Q9JI67 308 aa15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Habp4Q9JKS5 411 aaKnown RBP15.35■□□□□ 0.05
Shh-201ENSMUST00000002708 Sdccag3A2AIW0 432 aa15.34■□□□□ 0.05
Shh-201ENSMUST00000002708 Zfp352A2AML7 551 aa15.34■□□□□ 0.05
Shh-201ENSMUST00000002708 P01735 133 aa15.34■□□□□ 0.05
Shh-201ENSMUST00000002708 E330014E10RikQ3UL33 481 aa15.34■□□□□ 0.05
Shh-201ENSMUST00000002708 Commd6Q3V4B5 87 aa15.34■□□□□ 0.05
Shh-201ENSMUST00000002708 D5Ertd577eQ499F0 481 aa15.34■□□□□ 0.05
Shh-201ENSMUST00000002708 Snx33Q4VAA7 574 aa15.34■□□□□ 0.05
Shh-201ENSMUST00000002708 Slc31a1Q8K211 196 aa15.34■□□□□ 0.05
Shh-201ENSMUST00000002708 Dlgap5Q8K4R9 808 aa15.34■□□□□ 0.05
Shh-201ENSMUST00000002708 Olfr952Q8VFD7 314 aa15.34■□□□□ 0.05
Shh-201ENSMUST00000002708 TipinQ91WA1 278 aa15.34■□□□□ 0.05
Shh-201ENSMUST00000002708 Olfr955Q9EQ97 314 aa15.34■□□□□ 0.05
Shh-201ENSMUST00000002708 Pole3Q9JKP7 145 aa15.34■□□□□ 0.05
Shh-201ENSMUST00000002708 DptQ9QZZ6 201 aa15.34■□□□□ 0.05
Shh-201ENSMUST00000002708 Trbc2A0A075B5J4 173 aa15.34■□□□□ 0.05
Shh-201ENSMUST00000002708 Trbc1A0A0A6YWV4 173 aa15.34■□□□□ 0.05
Shh-201ENSMUST00000002708 Gm13539A0A1B0GSM6 183 aa15.34■□□□□ 0.05
Shh-201ENSMUST00000002708 Olfr228A0A1L1SR98 313 aa15.34■□□□□ 0.05
Shh-201ENSMUST00000002708 Fam209A2APA5 170 aa15.34■□□□□ 0.05
Shh-201ENSMUST00000002708 Fpr1P33766 364 aa15.34■□□□□ 0.05
Shh-201ENSMUST00000002708 SnrpnP63163 240 aaKnown RBP15.34■□□□□ 0.05
Shh-201ENSMUST00000002708 Cdh10P70408 788 aa15.34■□□□□ 0.05
Shh-201ENSMUST00000002708 Sox9Q04887 507 aa15.34■□□□□ 0.05
Shh-201ENSMUST00000002708 Sohlh1Q6IUP1 357 aa15.34■□□□□ 0.05
Shh-201ENSMUST00000002708 Zfp763Q8BIC7 588 aa15.34■□□□□ 0.05
Shh-201ENSMUST00000002708 Olfr815Q8VFU0 316 aa15.34■□□□□ 0.05
Shh-201ENSMUST00000002708 Olfr643Q8VGY1 314 aa15.34■□□□□ 0.05
Shh-201ENSMUST00000002708 Rab40bQ8VHP8 278 aa15.34■□□□□ 0.05
Shh-201ENSMUST00000002708 Pcdhga12Q91XY7 932 aa15.34■□□□□ 0.05
Shh-201ENSMUST00000002708 Klhl22Q99JN2 634 aa15.34■□□□□ 0.05
Shh-201ENSMUST00000002708 Lman2Q9DBH5 358 aaKnown RBP15.34■□□□□ 0.05
Shh-201ENSMUST00000002708 Ajap1A2ALI5 412 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 UbqlnlQ14DL0 610 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Slc35g3Q5F297 340 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Thoc6Q5U4D9 341 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Znf182Q6P560 627 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Smarcd3Q6P9Z1 483 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 EfhbQ8CDU5 853 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Ttc23Q8CHY7 488 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 CipcQ8R0W1 432 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Olfr1232Q8VEX7 311 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Olfr161Q8VGB9 313 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Olfr202Q8VGQ3 307 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Idh3bQ91VA7 384 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 D6Wsu163eQ91YN0 552 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Mrpl43Q99N89 183 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Spns3Q9D232 514 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Rasal1Q9Z268 799 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Ybx2Q9Z2C8 360 aaKnown RBP15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Vmn1r90A0A087WR36 309 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 4930433I11RikA0A0U1RPT6 723 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Olfr1366A0A1W2P740 328 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Gm7929A0A286YDV3 213 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Gm595A2AF73 655 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Gm14399A2ARW8 610 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Skint4A7TZF3 474 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Clip3B9EHT4 547 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Gm21977F6U3N7 213 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Gm8247F6VRJ8 213 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Gm8005F6YKY3 213 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Gm3015F6ZAP6 213 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Gm8212F6ZMY5 213 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Gm7954F7BAX1 213 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Gm8138F7BY56 213 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Gm8232F7CFJ3 213 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Gm17079F7D8Y4 213 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Gm8165L7N218 213 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Gm8122L7N2C7 213 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Gm17078M0QW51 211 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Thbs2Q03350 1172 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 HbegfQ06186 208 aa15.33■□□□□ 0.04
Shh-201ENSMUST00000002708 Brf2Q3UAW9 420 aa15.33■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 54.5 ms