RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 BTBD17A6NE02 478 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 NAP1L6A6NFF2 107 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 SNRPGP15A8MWD9 76 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 AP4M1O00189 453 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 SUV39H1O43463 412 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 RGS14O43566 566 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 ULK1O75385 1050 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 CLDN11O75508 207 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 RD3LP0DJH9 198 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 CKBP12277 381 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 ZNF44P15621 663 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 GKP32189 559 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 SLC11A2P49281 568 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 MMP15P51511 669 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 PSMA6P60900 246 aaKnown RBP7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 NUTF2P61970 127 aaKnown RBP7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 BLOC1S1P78537 153 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 SHC2P98077 582 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 PITPNAQ00169 270 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 SPIBQ01892 262 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 ZXDCQ2QGD7 858 aaPredicted RBP7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 ATAT1Q5SQI0 421 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 KIAA1161Q6NSJ0 714 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 NPSR1Q6W5P4 371 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 TPRA1Q86W33 373 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 SIAH3Q8IW03 269 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 GPR65Q8IYL9 337 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 GPR135Q8IZ08 494 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 ZNF511Q8NB15 262 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 AVL9Q8NBF6 648 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 ZNF461Q8TAF7 563 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 NEIL3Q8TAT5 605 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 GPBAR1Q8TDU6 330 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 SMAP2Q8WU79 429 aaPredicted RBP7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 NELL1Q92832 810 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 TMEM203Q969S6 136 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 SLAMF9Q96A28 289 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 RGMAQ96B86 450 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 SLC6A18Q96N87 628 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 EGFL8Q99944 293 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 ADGRE3Q9BY15 652 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 TM6SF2Q9BZW4 377 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 WDR26Q9H7D7 661 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 GPN1Q9HCN4 374 aaPredicted RBP7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 SMCO4Q9NRQ5 59 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 C1GALT1Q9NS00 363 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 THSD1Q9NS62 852 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 VSX1Q9NZR4 365 aaPredicted RBP7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 ZNF840PA6NDX5 716 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 URADA6NGE7 173 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 GABRR3A8MPY1 467 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 PRRG1O14668 218 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 SEPT4O43236 478 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 CREBL2O60519 120 aaPredicted RBP7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 EIF4E2O60573 245 aaKnown RBP7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 RDH16O75452 317 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 SPDEFO95238 335 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 SLC25A14O95258 325 aaPredicted RBP7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 EOMESO95936 686 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 HLA-DPB1P04440 258 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 IL5P05113 134 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 GKN3PP0CG01 181 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 RNH1P13489 461 aaKnown RBP7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 DDTP30046 118 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 S100A3P33764 101 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 MNDAP41218 407 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 NPBWR1P48145 328 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 CCR6P51684 374 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 PKIAP61925 76 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 FAM189BP81408 668 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 ZNF177Q13360 481 aaPredicted RBP7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 SF1Q15637 639 aaKnown RBP7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 AARDQ4LEZ3 155 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 ATPAF1Q5TC12 328 aaPredicted RBP7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 LIPJQ5W064 366 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 C12orf73Q69YU5 71 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 DOK6Q6PKX4 331 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 GLDNQ6ZMI3 551 aaPredicted RBP7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 Q6ZTK2 550 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 MARCH9Q86YJ5 346 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 ARIH2OSQ8N7S6 290 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 UBTD2Q8WUN7 234 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 RAB3CQ96E17 227 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 RHOVQ96L33 236 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 C19orf43Q9BQ61 176 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 MESP1Q9BRJ9 268 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 DOHHQ9BU89 302 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 MYOZ1Q9NP98 299 aaPredicted RBP7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 DZANK1Q9NVP4 752 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 RLIMQ9NVW2 624 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 PISDQ9UG56 409 aa7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 YARS2Q9Y2Z4 477 aaKnown RBP7.01□□□□□ -1.29
TRIM49B-202ENST00000622138 THSD7BQ9C0I4 1608 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 ZNF106Q9H2Y7 1883 aaKnown RBP7□□□□□ -1.29
TRIM49B-202ENST00000622138 C2orf78A6NCI8 922 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 TSTD3H0UI37 97 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 CACNB4O00305 520 aaPredicted RBP7□□□□□ -1.29
TRIM49B-202ENST00000622138 GSTZ1O43708 216 aaPredicted RBP7□□□□□ -1.29
TRIM49B-202ENST00000622138 PRMT3O60678 531 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms