RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 SCN3BQ9NY72 215 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 RSL24D1Q9UHA3 163 aaKnown RBP7.19□□□□□ -1.26
NEK3-207ENST00000617054 MGAT4BQ9UQ53 548 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 SNX5Q9Y5X3 404 aa7.19□□□□□ -1.26
NEK3-207ENST00000617054 RIF1Q5UIP0 2472 aaKnown RBP7.19□□□□□ -1.26
NEK3-207ENST00000617054 EFCAB7A8K855 629 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 OIP5O43482 229 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 WISP1O95388 367 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 DDAH2O95865 285 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 ZGLP1P0C6A0 271 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 GABRB1P18505 474 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 ITIH1P19827 911 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 TGFBR1P36897 503 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 MPLP40238 635 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 OMPP47874 163 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 CCR4P51679 360 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 GP2P55259 537 aaKnown RBP7.18□□□□□ -1.26
NEK3-207ENST00000617054 DOC2BQ14184 412 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 TRAM2Q15035 370 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 CD226Q15762 336 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 ZBED5Q49AG3 693 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 C1orf94Q6P1W5 598 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 SMARCD3Q6STE5 483 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 C9orf40Q8IXQ3 194 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 B3GNT7Q8NFL0 401 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 OR4D9Q8NGE8 314 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 RHBDD1Q8TEB9 315 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 C12orf43Q96C57 262 aaKnown RBP7.18□□□□□ -1.26
NEK3-207ENST00000617054 COPS4Q9BT78 406 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 LMF2Q9BU23 707 aaKnown RBP7.18□□□□□ -1.26
NEK3-207ENST00000617054 TUBA8Q9NY65 449 aaPredicted RBP7.18□□□□□ -1.26
NEK3-207ENST00000617054 SATB2Q9UPW6 733 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 COMMD3-BMI1R4GMX3 469 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 IGKV3D-11A0A0A0MRZ8 115 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 LNP1A1A4G5 178 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 KHNYNO15037 678 aaKnown RBP7.18□□□□□ -1.26
NEK3-207ENST00000617054 CNOT3O75175 753 aaKnown RBP7.18□□□□□ -1.26
NEK3-207ENST00000617054 NGFRP08138 427 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 CCDC159P0C7I6 412 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 MAKP20794 623 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 RPS4Y1P22090 263 aaKnown RBP7.18□□□□□ -1.26
NEK3-207ENST00000617054 PSMB9P28065 219 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 GIPRP48546 466 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 SMIM11AP58511 58 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 CDC42P60953 191 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 ST3GAL4Q11206 333 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 ILKQ13418 452 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 SF3A2Q15428 464 aaKnown RBP7.18□□□□□ -1.26
NEK3-207ENST00000617054 GXYLT1Q4G148 440 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 NKAIN1Q4KMZ8 207 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 SLC35F1Q5T1Q4 408 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 OR5M10Q6IEU7 315 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 ZCCHC12Q6PEW1 402 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 POMZP3Q6PJE2 187 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 HSDL2Q6YN16 418 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 FAR1Q8WVX9 515 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 YTHDF1Q9BYJ9 559 aaKnown RBP7.18□□□□□ -1.26
NEK3-207ENST00000617054 CHRNA10Q9GZZ6 450 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 DUSP21Q9H596 190 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 ZBTB20Q9HC78 741 aaPredicted RBP7.18□□□□□ -1.26
NEK3-207ENST00000617054 SEMA5BQ9P283 1151 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 BLOC1S6Q9UL45 172 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 MPDZO75970 2070 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 RALGAPA1Q6GYQ0 2036 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 CNOT1A5YKK6 2376 aaKnown RBP7.18□□□□□ -1.26
NEK3-207ENST00000617054 C2orf92A0A1B0GVN3 265 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 IDSB3KWA1 339 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 CCNA2P20248 432 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 AVPR2P30518 371 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 ACAA2P42765 397 aaKnown RBP7.18□□□□□ -1.26
NEK3-207ENST00000617054 SERTAD2Q14140 314 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 SLC23A3Q6PIS1 610 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 CASP12Q6UXS9 341 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 SHFQ7M4L6 423 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 RANBP3LQ86VV4 465 aaPredicted RBP7.18□□□□□ -1.26
NEK3-207ENST00000617054 OR51A7Q8NH64 312 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 DEPDC7Q96QD5 511 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 EPB41L1Q9H4G0 881 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 DNAJB12Q9NXW2 375 aaKnown RBP7.18□□□□□ -1.26
NEK3-207ENST00000617054 RARRES3Q9UL19 164 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 CARD8Q9Y2G2 431 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 TPRKBQ9Y3C4 175 aa7.18□□□□□ -1.26
NEK3-207ENST00000617054 ADAMTS20P59510 1910 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 TRAV27A0A087WT01 109 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 A0A1W2PPW3 197 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 TCRBV16S1A1N1A0A5B0 115 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 FAM183AA6NL82 134 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 RGS10O43665 173 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 ZNF354AO60765 605 aaPredicted RBP7.17□□□□□ -1.26
NEK3-207ENST00000617054 REM1O75628 298 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 OXSR1O95747 527 aaPredicted RBP7.17□□□□□ -1.26
NEK3-207ENST00000617054 CER1O95813 267 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 CSTAP01040 98 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 THBS1P07996 1170 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 HSMCR30P0CW71 290 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 CKMT1AP12532 417 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 DRD5P21918 477 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 MAGEA8P43361 318 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 SNAPC1Q16533 368 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 GTF2IRD2BQ6EKJ0 949 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms