RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 SLC26A5P58743 744 aa19.85■□□□□ 0.77
USP6NL-204ENST00000606752 CDK5R2Q13319 367 aa19.85■□□□□ 0.77
USP6NL-204ENST00000606752 RBM48Q5RL73 367 aaKnown RBP19.85■□□□□ 0.77
USP6NL-204ENST00000606752 CCDC71Q8IV32 467 aaPredicted RBP19.85■□□□□ 0.77
USP6NL-204ENST00000606752 APLFQ8IW19 511 aaPredicted RBP19.85■□□□□ 0.77
USP6NL-204ENST00000606752 ZNF440Q8IYI8 595 aa19.85■□□□□ 0.77
USP6NL-204ENST00000606752 LSMEM1Q8N8F7 131 aa19.85■□□□□ 0.77
USP6NL-204ENST00000606752 OR8K3Q8NH51 312 aa19.85■□□□□ 0.77
USP6NL-204ENST00000606752 OMA1Q96E52 524 aa19.85■□□□□ 0.77
USP6NL-204ENST00000606752 TRIM2Q9C040 744 aa19.85■□□□□ 0.77
USP6NL-204ENST00000606752 CCDC187A0A096LP49 1063 aa19.84■□□□□ 0.77
USP6NL-204ENST00000606752 PMS2P1A4D2B8 440 aa19.84■□□□□ 0.77
USP6NL-204ENST00000606752 DPPA5A6NC42 116 aa19.84■□□□□ 0.77
USP6NL-204ENST00000606752 ADAM11O75078 769 aa19.84■□□□□ 0.77
USP6NL-204ENST00000606752 UMODP07911 640 aa19.84■□□□□ 0.77
USP6NL-204ENST00000606752 CDK4P11802 303 aa19.84■□□□□ 0.77
USP6NL-204ENST00000606752 GSTM3P21266 225 aa19.84■□□□□ 0.77
USP6NL-204ENST00000606752 PNLIPRP2P54317 469 aa19.84■□□□□ 0.77
USP6NL-204ENST00000606752 NUP107P57740 925 aa19.84■□□□□ 0.77
USP6NL-204ENST00000606752 APOFQ13790 326 aa19.84■□□□□ 0.77
USP6NL-204ENST00000606752 PTGES3Q15185 160 aaKnown RBP19.84■□□□□ 0.77
USP6NL-204ENST00000606752 STPG1Q5TH74 334 aa19.84■□□□□ 0.77
USP6NL-204ENST00000606752 FNDC7Q5VTL7 733 aa19.84■□□□□ 0.77
USP6NL-204ENST00000606752 FAM69BQ5VUD6 431 aa19.84■□□□□ 0.77
USP6NL-204ENST00000606752 C6orf15Q6UXA7 325 aaPredicted RBP19.84■□□□□ 0.77
USP6NL-204ENST00000606752 MBOAT2Q6ZWT7 520 aa19.84■□□□□ 0.77
USP6NL-204ENST00000606752 PRICKLE2Q7Z3G6 844 aa19.84■□□□□ 0.77
USP6NL-204ENST00000606752 OR2Y1Q8NGV0 311 aa19.84■□□□□ 0.77
USP6NL-204ENST00000606752 PIGXQ8TBF5 258 aa19.84■□□□□ 0.77
USP6NL-204ENST00000606752 GNPDA2Q8TDQ7 276 aa19.84■□□□□ 0.77
USP6NL-204ENST00000606752 TMEM255BQ8WV15 326 aa19.84■□□□□ 0.77
USP6NL-204ENST00000606752 PRSS27Q9BQR3 290 aa19.84■□□□□ 0.77
USP6NL-204ENST00000606752 ADNPQ9H2P0 1102 aa19.84■□□□□ 0.77
USP6NL-204ENST00000606752 PCNX2A6NKB5 2137 aa19.84■□□□□ 0.77
USP6NL-204ENST00000606752 FOXD2O60548 495 aaPredicted RBP19.83■□□□□ 0.77
USP6NL-204ENST00000606752 LYPD3O95274 346 aa19.83■□□□□ 0.77
USP6NL-204ENST00000606752 GTF2A1P52655 376 aaPredicted RBP19.83■□□□□ 0.77
USP6NL-204ENST00000606752 NRG3P56975 720 aa19.83■□□□□ 0.77
USP6NL-204ENST00000606752 ALDH6A1Q02252 535 aaKnown RBP19.83■□□□□ 0.77
USP6NL-204ENST00000606752 OR5L2Q8NGL0 311 aa19.83■□□□□ 0.77
USP6NL-204ENST00000606752 GPA33Q99795 319 aa19.83■□□□□ 0.77
USP6NL-204ENST00000606752 LIN28AQ9H9Z2 209 aaKnown RBP19.83■□□□□ 0.77
USP6NL-204ENST00000606752 FAM86C1Q9NVL1 165 aa19.83■□□□□ 0.77
USP6NL-204ENST00000606752 PCDHGA3Q9Y5H0 932 aa19.83■□□□□ 0.77
USP6NL-204ENST00000606752 TRBV11-1A0A0K0K1C0 115 aa19.83■□□□□ 0.76
USP6NL-204ENST00000606752 ZAR1LA6NP61 321 aa19.83■□□□□ 0.76
USP6NL-204ENST00000606752 ICOSLGO75144 302 aa19.83■□□□□ 0.76
USP6NL-204ENST00000606752 SMNDC1O75940 238 aaKnown RBP eCLIP19.83■□□□□ 0.76
USP6NL-204ENST00000606752 NTN1O95631 604 aa19.83■□□□□ 0.76
USP6NL-204ENST00000606752 ATP6V1B1P15313 513 aa19.83■□□□□ 0.76
USP6NL-204ENST00000606752 NBL1P41271 181 aa19.83■□□□□ 0.76
USP6NL-204ENST00000606752 OMPP47874 163 aa19.83■□□□□ 0.76
USP6NL-204ENST00000606752 TOP3AQ13472 1001 aaPredicted RBP19.83■□□□□ 0.76
USP6NL-204ENST00000606752 MAD2L1BPQ15013 274 aaPredicted RBP19.83■□□□□ 0.76
USP6NL-204ENST00000606752 HES3Q5TGS1 186 aa19.83■□□□□ 0.76
USP6NL-204ENST00000606752 LAIR2Q6ISS4 152 aa19.83■□□□□ 0.76
USP6NL-204ENST00000606752 APOOLQ6UXV4 268 aa19.83■□□□□ 0.76
USP6NL-204ENST00000606752 RNF113BQ8IZP6 322 aaKnown RBP19.83■□□□□ 0.76
USP6NL-204ENST00000606752 NLGN4XQ8N0W4 816 aa19.83■□□□□ 0.76
USP6NL-204ENST00000606752 FAM71CQ8NEG0 241 aa19.83■□□□□ 0.76
USP6NL-204ENST00000606752 CNIH3Q8TBE1 160 aa19.83■□□□□ 0.76
USP6NL-204ENST00000606752 A0A0B4J2E0 115 aa19.82■□□□□ 0.76
USP6NL-204ENST00000606752 A0A1B0GX12 115 aa19.82■□□□□ 0.76
USP6NL-204ENST00000606752 DLGAP3O95886 979 aa19.82■□□□□ 0.76
USP6NL-204ENST00000606752 NGFRP08138 427 aa19.82■□□□□ 0.76
USP6NL-204ENST00000606752 CRHBPP24387 322 aa19.82■□□□□ 0.76
USP6NL-204ENST00000606752 POU1F1P28069 291 aa19.82■□□□□ 0.76
USP6NL-204ENST00000606752 TUBA4AP68366 448 aa19.82■□□□□ 0.76
USP6NL-204ENST00000606752 TSPAN31Q12999 210 aa19.82■□□□□ 0.76
USP6NL-204ENST00000606752 CD226Q15762 336 aa19.82■□□□□ 0.76
USP6NL-204ENST00000606752 NDUFAF6Q330K2 333 aa19.82■□□□□ 0.76
USP6NL-204ENST00000606752 NRMQ8IXM6 262 aa19.82■□□□□ 0.76
USP6NL-204ENST00000606752 PHOSPHO1Q8TCT1 267 aa19.82■□□□□ 0.76
USP6NL-204ENST00000606752 UBE2FQ969M7 185 aa19.82■□□□□ 0.76
USP6NL-204ENST00000606752 SPRY4Q9C004 299 aa19.82■□□□□ 0.76
USP6NL-204ENST00000606752 IRF2BPLQ9H1B7 796 aa19.82■□□□□ 0.76
USP6NL-204ENST00000606752 POLR1BQ9H9Y6 1135 aa19.82■□□□□ 0.76
USP6NL-204ENST00000606752 TUBA8Q9NY65 449 aaPredicted RBP19.82■□□□□ 0.76
USP6NL-204ENST00000606752 A0A087WXM4 84 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 A0A1B0GWA3 101 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 A0A1W2PNU3 283 aaPredicted RBP19.81■□□□□ 0.76
USP6NL-204ENST00000606752 C9orf172C9J069 976 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 GTPBP1O00178 669 aaKnown RBP19.81■□□□□ 0.76
USP6NL-204ENST00000606752 ZFAND5O76080 213 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 TFAP2AP05549 437 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 UBL4AP11441 157 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 GSSP48637 474 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 IDH2P48735 452 aaKnown RBP19.81■□□□□ 0.76
USP6NL-204ENST00000606752 CDH15P55291 814 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 PCOLCEQ15113 449 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 TMEM164Q5U3C3 297 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 DESI1Q6ICB0 168 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 ENTHD1Q8IYW4 607 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 DEPDC4Q8N2C3 294 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 GATSQ8NAP1 163 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 FAM81AQ8TBF8 368 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 ARSGQ96EG1 525 aa19.81■□□□□ 0.76
USP6NL-204ENST00000606752 KRCC1Q9NPI7 259 aaPredicted RBP19.81■□□□□ 0.76
USP6NL-204ENST00000606752 EXOSC3Q9NQT5 275 aaKnown RBP19.81■□□□□ 0.76
USP6NL-204ENST00000606752 NPFFR2Q9Y5X5 522 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms