RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 A0A1W2PQD3 144 aa16.53■□□□□ 0.24
VRK3-225ENST00000601912 TRAPPC13A5PLN9 417 aa16.53■□□□□ 0.24
VRK3-225ENST00000601912 OR2J2O76002 312 aa16.53■□□□□ 0.24
VRK3-225ENST00000601912 UBL4AP11441 157 aa16.53■□□□□ 0.24
VRK3-225ENST00000601912 FUT4P22083 530 aa16.53■□□□□ 0.24
VRK3-225ENST00000601912 CLK3P49761 638 aaKnown RBP16.53■□□□□ 0.24
VRK3-225ENST00000601912 OR1Q1Q15612 314 aa16.53■□□□□ 0.24
VRK3-225ENST00000601912 ZIK1Q3SY52 487 aaPredicted RBP16.53■□□□□ 0.24
VRK3-225ENST00000601912 ANKRD34AQ69YU3 496 aa16.53■□□□□ 0.24
VRK3-225ENST00000601912 ZNF555Q8NEP9 628 aa16.53■□□□□ 0.24
VRK3-225ENST00000601912 SLC7A13Q8TCU3 470 aa16.53■□□□□ 0.24
VRK3-225ENST00000601912 KIAA1143Q96AT1 154 aaPredicted RBP16.53■□□□□ 0.24
VRK3-225ENST00000601912 TMCO6Q96DC7 493 aa16.53■□□□□ 0.24
VRK3-225ENST00000601912 ZNF570Q96NI8 536 aa16.53■□□□□ 0.24
VRK3-225ENST00000601912 TRIM2Q9C040 744 aa16.53■□□□□ 0.24
VRK3-225ENST00000601912 TOR3AQ9H497 397 aa16.53■□□□□ 0.24
VRK3-225ENST00000601912 MAN2C1Q9NTJ4 1040 aa16.53■□□□□ 0.24
VRK3-225ENST00000601912 P4HTMQ9NXG6 502 aa16.53■□□□□ 0.24
VRK3-225ENST00000601912 FBXL4Q9UKA2 621 aa16.53■□□□□ 0.24
VRK3-225ENST00000601912 SH3PXD2BA1X283 911 aa16.52■□□□□ 0.23
VRK3-225ENST00000601912 ALG1L2C9J202 215 aa16.52■□□□□ 0.23
VRK3-225ENST00000601912 H0YAE9 185 aa16.52■□□□□ 0.23
VRK3-225ENST00000601912 NDUFB5O43674 189 aa16.52■□□□□ 0.23
VRK3-225ENST00000601912 OR10H3O60404 316 aa16.52■□□□□ 0.23
VRK3-225ENST00000601912 NADKO95544 446 aaPredicted RBP16.52■□□□□ 0.23
VRK3-225ENST00000601912 HTR2AP28223 471 aa16.52■□□□□ 0.23
VRK3-225ENST00000601912 CAPGP40121 348 aa16.52■□□□□ 0.23
VRK3-225ENST00000601912 PLAURQ03405 335 aa16.52■□□□□ 0.23
VRK3-225ENST00000601912 SLC36A3Q495N2 470 aa16.52■□□□□ 0.23
VRK3-225ENST00000601912 FNDC7Q5VTL7 733 aa16.52■□□□□ 0.23
VRK3-225ENST00000601912 PODNL1Q6PEZ8 512 aa16.52■□□□□ 0.23
VRK3-225ENST00000601912 ZNF613Q6PF04 617 aa16.52■□□□□ 0.23
VRK3-225ENST00000601912 RRM2BQ7LG56 351 aa16.52■□□□□ 0.23
VRK3-225ENST00000601912 NUP54Q7Z3B4 507 aa16.52■□□□□ 0.23
VRK3-225ENST00000601912 GDF7Q7Z4P5 450 aa16.52■□□□□ 0.23
VRK3-225ENST00000601912 GATSQ8NAP1 163 aa16.52■□□□□ 0.23
VRK3-225ENST00000601912 OR9Q2Q8NGE9 314 aa16.52■□□□□ 0.23
VRK3-225ENST00000601912 ASCL3Q9NQ33 180 aa16.52■□□□□ 0.23
VRK3-225ENST00000601912 EXOSC3Q9NQT5 275 aaKnown RBP16.52■□□□□ 0.23
VRK3-225ENST00000601912 RYDENQ9NUL5 291 aaKnown RBP16.52■□□□□ 0.23
VRK3-225ENST00000601912 NTNG1Q9Y2I2 539 aa16.52■□□□□ 0.23
VRK3-225ENST00000601912 ZNF264O43296 627 aa16.51■□□□□ 0.23
VRK3-225ENST00000601912 EVI2BP34910 448 aa16.51■□□□□ 0.23
VRK3-225ENST00000601912 IFNGR2P38484 337 aa16.51■□□□□ 0.23
VRK3-225ENST00000601912 ACAA2P42765 397 aaKnown RBP16.51■□□□□ 0.23
VRK3-225ENST00000601912 COPZ1P61923 177 aa16.51■□□□□ 0.23
VRK3-225ENST00000601912 SEC23BQ15437 767 aa16.51■□□□□ 0.23
VRK3-225ENST00000601912 CD226Q15762 336 aa16.51■□□□□ 0.23
VRK3-225ENST00000601912 TTC23Q5W5X9 447 aa16.51■□□□□ 0.23
VRK3-225ENST00000601912 DESI1Q6ICB0 168 aa16.51■□□□□ 0.23
VRK3-225ENST00000601912 APOOLQ6UXV4 268 aa16.51■□□□□ 0.23
VRK3-225ENST00000601912 GALNT5Q7Z7M9 940 aa16.51■□□□□ 0.23
VRK3-225ENST00000601912 MRGPREQ86SM8 312 aa16.51■□□□□ 0.23
VRK3-225ENST00000601912 DTX1Q86Y01 620 aa16.51■□□□□ 0.23
VRK3-225ENST00000601912 POGLUT1Q8NBL1 392 aa16.51■□□□□ 0.23
VRK3-225ENST00000601912 AQP11Q8NBQ7 271 aa16.51■□□□□ 0.23
VRK3-225ENST00000601912 FAM71CQ8NEG0 241 aa16.51■□□□□ 0.23
VRK3-225ENST00000601912 TTC9Q92623 222 aa16.51■□□□□ 0.23
VRK3-225ENST00000601912 CNBD2Q96M20 576 aa16.51■□□□□ 0.23
VRK3-225ENST00000601912 IP6K3Q96PC2 410 aa16.51■□□□□ 0.23
VRK3-225ENST00000601912 FUZQ9BT04 418 aa16.51■□□□□ 0.23
VRK3-225ENST00000601912 GPN2Q9H9Y4 310 aaPredicted RBP16.51■□□□□ 0.23
VRK3-225ENST00000601912 PAPOLBQ9NRJ5 636 aaKnown RBP16.51■□□□□ 0.23
VRK3-225ENST00000601912 RPS6KB2Q9UBS0 482 aa16.51■□□□□ 0.23
VRK3-225ENST00000601912 SLC7A7Q9UM01 511 aa16.51■□□□□ 0.23
VRK3-225ENST00000601912 MGAT4BQ9UQ53 548 aa16.51■□□□□ 0.23
VRK3-225ENST00000601912 POFUT2Q9Y2G5 429 aa16.51■□□□□ 0.23
VRK3-225ENST00000601912 PTPRBP23467 1997 aa16.51■□□□□ 0.23
VRK3-225ENST00000601912 DXOO77932 396 aaKnown RBP16.5■□□□□ 0.23
VRK3-225ENST00000601912 CELA2AP08217 269 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 RYKP34925 604 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 FBXW4P57775 412 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 IL10RAQ13651 578 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 ZNF770Q6IQ21 691 aaPredicted RBP16.5■□□□□ 0.23
VRK3-225ENST00000601912 ZNF730Q6ZMV8 503 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 MARVELD2Q8N4S9 558 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 TMCO5AQ8N6Q1 288 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 LSMEM1Q8N8F7 131 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 OR5M3Q8NGP4 307 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 RASL10BQ96S79 203 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 ANKRD60Q9BZ19 345 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 LAT2Q9GZY6 243 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 ENOPH1Q9UHY7 261 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 YARS2Q9Y2Z4 477 aaKnown RBP16.5■□□□□ 0.23
VRK3-225ENST00000601912 FADS1O60427 444 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 ZNF354AO60765 605 aaPredicted RBP16.5■□□□□ 0.23
VRK3-225ENST00000601912 MITFO75030 526 aaPredicted RBP16.5■□□□□ 0.23
VRK3-225ENST00000601912 ITGA10O75578 1167 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 ADAP00813 363 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 GASTP01350 101 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 RPSAP08865 295 aaKnown RBP16.5■□□□□ 0.23
VRK3-225ENST00000601912 FBXO45P0C2W1 286 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 LINGO3P0C6S8 592 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 SDHBP21912 280 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 CBLP22681 906 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 UGT2B15P54855 530 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 ADARB1P78563 741 aaKnown RBP16.5■□□□□ 0.23
VRK3-225ENST00000601912 KCNAB2Q13303 367 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 SKP2Q13309 424 aa16.5■□□□□ 0.23
VRK3-225ENST00000601912 PDK3Q15120 406 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms