RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 TXNL4BQ9NX01 149 aaKnown RBP14.57□□□□□ -0.08
MBD1-227ENST00000592060 DNAJB12Q9NXW2 375 aaKnown RBP14.57□□□□□ -0.08
MBD1-227ENST00000592060 FLRT3Q9NZU0 649 aa14.57□□□□□ -0.08
MBD1-227ENST00000592060 MRPS33Q9Y291 106 aaKnown RBP14.57□□□□□ -0.08
MBD1-227ENST00000592060 TMEM5Q9Y2B1 443 aa14.57□□□□□ -0.08
MBD1-227ENST00000592060 UGT2A1Q9Y4X1 527 aa14.57□□□□□ -0.08
MBD1-227ENST00000592060 CSNK1G3Q9Y6M4 447 aa14.57□□□□□ -0.08
MBD1-227ENST00000592060 EYSQ5T1H1 3165 aa14.57□□□□□ -0.08
MBD1-227ENST00000592060 SOCS6O14544 535 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 ADAM11O75078 769 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 HNRNPCP07910 306 aaKnown RBP eCLIP14.56□□□□□ -0.08
MBD1-227ENST00000592060 FNTBP49356 437 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 GFERP55789 205 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 CTBP2P56545 445 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 STX4Q12846 297 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 ZNHIT3Q15649 155 aaPredicted RBP14.56□□□□□ -0.08
MBD1-227ENST00000592060 CD180Q99467 661 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 SLC38A3Q99624 504 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 KCNS3Q9BQ31 491 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 ARHGAP9Q9BRR9 750 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.56□□□□□ -0.08
MBD1-227ENST00000592060 ENKD1Q9H0I2 346 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 KLHL3Q9UH77 587 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 DOLKQ9UPQ8 538 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 CEP192Q8TEP8 1941 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 NPIPB9F8W1W9 429 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 TBX1O43435 398 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 CHP2O43745 196 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 CDC123O75794 336 aaPredicted RBP14.56□□□□□ -0.08
MBD1-227ENST00000592060 TSPAN19P0C672 248 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 MAOBP27338 520 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 MLLT3P42568 568 aaPredicted RBP14.56□□□□□ -0.08
MBD1-227ENST00000592060 ACAA2P42765 397 aaKnown RBP14.56□□□□□ -0.08
MBD1-227ENST00000592060 GPR3P46089 330 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 RPS25P62851 125 aaKnown RBP14.56□□□□□ -0.08
MBD1-227ENST00000592060 RACK1P63244 317 aaKnown RBP14.56□□□□□ -0.08
MBD1-227ENST00000592060 BTG2P78543 158 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 DNASE1L3Q13609 305 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 ERV3-1Q14264 604 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 PLK5Q496M5 336 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 CXXC5Q7LFL8 322 aaKnown RBP14.56□□□□□ -0.08
MBD1-227ENST00000592060 LAPTM4BQ86VI4 370 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 SLC22A16Q86VW1 577 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 CPOQ8IVL8 374 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 FAM83FQ8NEG4 500 aaPredicted RBP14.56□□□□□ -0.08
MBD1-227ENST00000592060 GATAD2BQ8WXI9 593 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 ZNF426Q9BUY5 554 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 PCED1AQ9H1Q7 454 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 FN3KQ9H479 309 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 TMEM27Q9HBJ8 222 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 MEPEQ9NQ76 525 aaPredicted RBP14.56□□□□□ -0.08
MBD1-227ENST00000592060 ABCB10Q9NRK6 738 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 CRNNQ9UBG3 495 aaPredicted RBP14.56□□□□□ -0.08
MBD1-227ENST00000592060 PLCL2Q9UPR0 1127 aa14.56□□□□□ -0.08
MBD1-227ENST00000592060 YARS2Q9Y2Z4 477 aaKnown RBP14.56□□□□□ -0.08
MBD1-227ENST00000592060 DNAH14Q0VDD8 3507 aa14.55□□□□□ -0.08
MBD1-227ENST00000592060 A0A1B0GWA3 101 aa14.55□□□□□ -0.08
MBD1-227ENST00000592060 J3QRE1 110 aa14.55□□□□□ -0.08
MBD1-227ENST00000592060 CTDSP2O14595 271 aa14.55□□□□□ -0.08
MBD1-227ENST00000592060 PLD2O14939 933 aa14.55□□□□□ -0.08
MBD1-227ENST00000592060 ZNF749O43361 778 aa14.55□□□□□ -0.08
MBD1-227ENST00000592060 RFPL3O75679 317 aa14.55□□□□□ -0.08
MBD1-227ENST00000592060 RFX3P48380 749 aa14.55□□□□□ -0.08
MBD1-227ENST00000592060 DSG2Q14126 1118 aa14.55□□□□□ -0.08
MBD1-227ENST00000592060 ZNF141Q15928 474 aa14.55□□□□□ -0.08
MBD1-227ENST00000592060 STEAP3Q658P3 488 aa14.55□□□□□ -0.08
MBD1-227ENST00000592060 RPL13AP3Q6NVV1 102 aa14.55□□□□□ -0.08
MBD1-227ENST00000592060 NIPAL3Q6P499 406 aa14.55□□□□□ -0.08
MBD1-227ENST00000592060 QSOX2Q6ZRP7 698 aa14.55□□□□□ -0.08
MBD1-227ENST00000592060 GID4Q8IVV7 300 aa14.55□□□□□ -0.08
MBD1-227ENST00000592060 LNX2Q8N448 690 aa14.55□□□□□ -0.08
MBD1-227ENST00000592060 CADM4Q8NFZ8 388 aa14.55□□□□□ -0.08
MBD1-227ENST00000592060 OR52L1Q8NGH7 329 aa14.55□□□□□ -0.08
MBD1-227ENST00000592060 OR13C2Q8NGS9 318 aa14.55□□□□□ -0.08
MBD1-227ENST00000592060 UFD1Q92890 307 aa14.55□□□□□ -0.08
MBD1-227ENST00000592060 BPIFA2Q96DR5 249 aa14.55□□□□□ -0.08
MBD1-227ENST00000592060 RBM18Q96H35 190 aaKnown RBP14.55□□□□□ -0.08
MBD1-227ENST00000592060 SPACA7Q96KW9 195 aa14.55□□□□□ -0.08
MBD1-227ENST00000592060 DGAT2Q96PD7 388 aa14.55□□□□□ -0.08
MBD1-227ENST00000592060 CHRNA10Q9GZZ6 450 aa14.55□□□□□ -0.08
MBD1-227ENST00000592060 POLE4Q9NR33 117 aa14.55□□□□□ -0.08
MBD1-227ENST00000592060 SIGLEC7Q9Y286 467 aa14.55□□□□□ -0.08
MBD1-227ENST00000592060 MED31Q9Y3C7 131 aa14.55□□□□□ -0.08
MBD1-227ENST00000592060 TMEM184BQ9Y519 407 aaPredicted RBP14.55□□□□□ -0.08
MBD1-227ENST00000592060 PCDH15Q96QU1 1955 aa14.55□□□□□ -0.08
MBD1-227ENST00000592060 IGHV5-51A0A0C4DH38 117 aa14.54□□□□□ -0.08
MBD1-227ENST00000592060 TLCD2A6NGC4 264 aa14.54□□□□□ -0.08
MBD1-227ENST00000592060 BOLA2-SMG1P6H3BVE0 249 aa14.54□□□□□ -0.08
MBD1-227ENST00000592060 PRAMEF2O60811 474 aa14.54□□□□□ -0.08
MBD1-227ENST00000592060 LALBAP00709 142 aa14.54□□□□□ -0.08
MBD1-227ENST00000592060 IL1AP01583 271 aa14.54□□□□□ -0.08
MBD1-227ENST00000592060 FGFBP1Q14512 234 aa14.54□□□□□ -0.08
MBD1-227ENST00000592060 ZNF267Q14586 743 aaPredicted RBP14.54□□□□□ -0.08
MBD1-227ENST00000592060 SMAD2Q15796 467 aaKnown RBP14.54□□□□□ -0.08
MBD1-227ENST00000592060 THSD4Q6ZMP0 1018 aa14.54□□□□□ -0.08
MBD1-227ENST00000592060 LHFPL3Q86UP9 236 aa14.54□□□□□ -0.08
MBD1-227ENST00000592060 ZNF614Q8N883 585 aa14.54□□□□□ -0.08
MBD1-227ENST00000592060 RNF217Q8TC41 542 aa14.54□□□□□ -0.08
MBD1-227ENST00000592060 GRHL3Q8TE85 626 aa14.54□□□□□ -0.08
MBD1-227ENST00000592060 SLC35B4Q969S0 331 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms