RNA–Protein interactions for RNA: ENST00000578954.5

SS18-211, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 756 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-211ENST00000578954 LRTOMTQ8WZ04 291 aa14.76□□□□□ -0.05
SS18-211ENST00000578954 NR4A3Q92570 626 aa14.76□□□□□ -0.05
SS18-211ENST00000578954 DHRS1Q96LJ7 313 aa14.76□□□□□ -0.05
SS18-211ENST00000578954 ZNF347Q96SE7 839 aa14.76□□□□□ -0.05
SS18-211ENST00000578954 PKP2Q99959 881 aa14.76□□□□□ -0.05
SS18-211ENST00000578954 OSBPL11Q9BXB4 747 aa14.76□□□□□ -0.05
SS18-211ENST00000578954 ANGPTL4Q9BY76 406 aa14.76□□□□□ -0.05
SS18-211ENST00000578954 DNAJB9Q9UBS3 223 aa14.76□□□□□ -0.05
SS18-211ENST00000578954 NKX1-2Q9UD57 310 aaPredicted RBP14.76□□□□□ -0.05
SS18-211ENST00000578954 WIF1Q9Y5W5 379 aa14.76□□□□□ -0.05
SS18-211ENST00000578954 IGF2RP11717 2491 aa14.75□□□□□ -0.05
SS18-211ENST00000578954 C1QTNF9BB2RNN3 333 aa14.75□□□□□ -0.05
SS18-211ENST00000578954 FAAHO00519 579 aa14.75□□□□□ -0.05
SS18-211ENST00000578954 CLOCKO15516 846 aa14.75□□□□□ -0.05
SS18-211ENST00000578954 OIP5O43482 229 aa14.75□□□□□ -0.05
SS18-211ENST00000578954 SCO2O43819 266 aa14.75□□□□□ -0.05
SS18-211ENST00000578954 ADAM11O75078 769 aa14.75□□□□□ -0.05
SS18-211ENST00000578954 LDLRP01130 860 aa14.75□□□□□ -0.05
SS18-211ENST00000578954 C1QTNF9P0C862 333 aa14.75□□□□□ -0.05
SS18-211ENST00000578954 UBTFL6P0CB48 400 aaPredicted RBP14.75□□□□□ -0.05
SS18-211ENST00000578954 CCL3P10147 92 aa14.75□□□□□ -0.05
SS18-211ENST00000578954 CASRP41180 1078 aa14.75□□□□□ -0.05
SS18-211ENST00000578954 RNF144AP50876 292 aaPredicted RBP14.75□□□□□ -0.05
SS18-211ENST00000578954 SUMO3P55854 103 aaPredicted RBP14.75□□□□□ -0.05
SS18-211ENST00000578954 C17orf67Q0P5P2 114 aa14.75□□□□□ -0.05
SS18-211ENST00000578954 EPS8Q12929 822 aa14.75□□□□□ -0.05
SS18-211ENST00000578954 TUBA3CQ13748 450 aa14.75□□□□□ -0.05
SS18-211ENST00000578954 SLC22A10Q63ZE4 541 aa14.75□□□□□ -0.05
SS18-211ENST00000578954 OR2T5Q6IEZ7 315 aa14.75□□□□□ -0.05
SS18-211ENST00000578954 TUBA3EQ6PEY2 450 aa14.75□□□□□ -0.05
SS18-211ENST00000578954 LRRC69Q6ZNQ3 347 aa14.75□□□□□ -0.05
SS18-211ENST00000578954 GATSQ8NAP1 163 aa14.75□□□□□ -0.05
SS18-211ENST00000578954 FDCSPQ8NFU4 85 aa14.75□□□□□ -0.05
SS18-211ENST00000578954 OR2T29Q8NH02 315 aa14.75□□□□□ -0.05
SS18-211ENST00000578954 ARSGQ96EG1 525 aa14.75□□□□□ -0.05
SS18-211ENST00000578954 PRRC1Q96M27 445 aa14.75□□□□□ -0.05
SS18-211ENST00000578954 PIP5K1AQ99755 562 aa14.75□□□□□ -0.05
SS18-211ENST00000578954 UTP23Q9BRU9 249 aaKnown RBP14.75□□□□□ -0.05
SS18-211ENST00000578954 RASSF4Q9H2L5 321 aa14.75□□□□□ -0.05
SS18-211ENST00000578954 METTL7AQ9H8H3 244 aa14.75□□□□□ -0.05
SS18-211ENST00000578954 NTN4Q9HB63 628 aa14.75□□□□□ -0.05
SS18-211ENST00000578954 PROK2Q9HC23 129 aa14.75□□□□□ -0.05
SS18-211ENST00000578954 ICAM5Q9UMF0 924 aa14.75□□□□□ -0.05
SS18-211ENST00000578954 A4GNTQ9UNA3 340 aa14.75□□□□□ -0.05
SS18-211ENST00000578954 RAXQ9Y2V3 346 aa14.75□□□□□ -0.05
SS18-211ENST00000578954 TMEM8BA6NDV4 472 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 TAF4O00268 1085 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 AP3D1O14617 1153 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 FFAR1O14842 300 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 CASQ2O14958 399 aaPredicted RBP14.74□□□□□ -0.05
SS18-211ENST00000578954 NEURL1O76050 574 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 WDPCPO95876 746 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 CST1P01037 141 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 GKN3PP0CG01 181 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 PRG2P13727 222 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 HTR2AP28223 471 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 CD96P40200 585 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 CCL11P51671 97 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 ZNF117Q03924 483 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 SLC34A1Q06495 639 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 GK3PQ14409 553 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 NDUFAF6Q330K2 333 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 FBXW10Q5XX13 1052 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 BICRALQ6AI39 1079 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 CBLN3Q6UW01 205 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 DEF8Q6ZN54 512 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 RANBP3LQ86VV4 465 aaPredicted RBP14.74□□□□□ -0.05
SS18-211ENST00000578954 TSPYL5Q86VY4 417 aaPredicted RBP14.74□□□□□ -0.05
SS18-211ENST00000578954 CYP4Z1Q86W10 505 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 OFCC1Q8IZS5 231 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 LSMEM1Q8N8F7 131 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 PIK3C3Q8NEB9 887 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 HAS2Q92819 552 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 CENPNQ96H22 339 aaPredicted RBP14.74□□□□□ -0.05
SS18-211ENST00000578954 DCBLD2Q96PD2 775 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 MCHR1Q99705 422 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 SMAD5Q99717 465 aaKnown RBP14.74□□□□□ -0.05
SS18-211ENST00000578954 ZNF559Q9BR84 538 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 SDHAF3Q9NRP4 125 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 KLRF1Q9NZS2 232 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 LRFN1Q9P244 771 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 CARD8Q9Y2G2 431 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 FAM32AQ9Y421 112 aaKnown RBP14.74□□□□□ -0.05
SS18-211ENST00000578954 CNTRLQ7Z7A1 2325 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 PTPRQQ9UMZ3 2332 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 ASPMQ8IZT6 3477 aa14.74□□□□□ -0.05
SS18-211ENST00000578954 HEATR5AQ86XA9 2040 aa14.73□□□□□ -0.05
SS18-211ENST00000578954 OR5H15A6NDH6 313 aa14.73□□□□□ -0.05
SS18-211ENST00000578954 A6NL46 340 aa14.73□□□□□ -0.05
SS18-211ENST00000578954 B4DXG7 233 aa14.73□□□□□ -0.05
SS18-211ENST00000578954 J3KTA2 159 aa14.73□□□□□ -0.05
SS18-211ENST00000578954 GTPBP1O00178 669 aaKnown RBP14.73□□□□□ -0.05
SS18-211ENST00000578954 ADAMDEC1O15204 470 aa14.73□□□□□ -0.05
SS18-211ENST00000578954 DIRAS1O95057 198 aa14.73□□□□□ -0.05
SS18-211ENST00000578954 OR5F1O95221 314 aa14.73□□□□□ -0.05
SS18-211ENST00000578954 BAG2O95816 211 aa14.73□□□□□ -0.05
SS18-211ENST00000578954 MSX1P28360 303 aa14.73□□□□□ -0.05
SS18-211ENST00000578954 SLC6A8P48029 635 aa14.73□□□□□ -0.05
SS18-211ENST00000578954 ST13P50502 369 aaKnown RBP14.73□□□□□ -0.05
SS18-211ENST00000578954 P2RX1P51575 399 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms