RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 TRAV9-2A0A087WT02 112 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 FAM230AA0A1W2PPH8 454 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 RSPH10B2B2RC85 870 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 HSBP1L1C9JCN9 74 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 YKT6O15498 198 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 CLDN3O15551 220 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 IDH1O75874 414 aaKnown RBP3.91□□□□□ -1.78
NUP88-213ENST00000576862 PRAMEF12O95522 483 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 DIRAS3O95661 229 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 PIGRP01833 764 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 KRT14P02533 472 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 UQCRFS1P1P0C7P4 283 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 RSPH10BP0C881 870 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 CT45A8P0DMV1 189 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 CT45A9P0DMV2 189 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 CCDC192P0DO97 292 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 TROVE2P10155 538 aaKnown RBP eCLIP3.91□□□□□ -1.78
NUP88-213ENST00000576862 UROSP10746 265 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 HSPD1P10809 573 aaKnown RBP3.91□□□□□ -1.78
NUP88-213ENST00000576862 ANXA8P13928 327 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 NCF1P14598 390 aaPredicted RBP3.91□□□□□ -1.78
NUP88-213ENST00000576862 CPA3P15088 417 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 HPGDP15428 266 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 CYP3A5P20815 502 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 ALDH3B1P43353 468 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 RGS19P49795 217 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 RPS8P62241 208 aaKnown RBP3.91□□□□□ -1.78
NUP88-213ENST00000576862 HSPA14Q0VDF9 509 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 SCGB2A2Q13296 93 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 PLD1Q13393 1074 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 ARHGAP19Q14CB8 494 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 LTB4RQ15722 352 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 UNC50Q53HI1 259 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 CT45A2Q5DJT8 189 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 ANXA8L1Q5VT79 327 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 PRR5LQ6MZQ0 368 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 CD164L2Q6UWJ8 174 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 Q6ZRG5 221 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 ERO1BQ86YB8 467 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 ZNF679Q8IYX0 411 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 ELMOD2Q8IZ81 293 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 ARFGAP2Q8N6H7 521 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 OR4L1Q8NH43 312 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 ZNF671Q8TAW3 534 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 TMEM186Q96B77 213 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 LRRC39Q96DD0 335 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 C16orf58Q96GQ5 468 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 SIKE1Q9BRV8 207 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 MTG1Q9BT17 334 aaPredicted RBP3.91□□□□□ -1.78
NUP88-213ENST00000576862 SPZ1Q9BXG8 430 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 SLITRK2Q9H156 845 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 ZBP1Q9H171 429 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 DPEP3Q9H4B8 488 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 COQ10BQ9H8M1 238 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 MAGEF1Q9HAY2 307 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 HPS4Q9NQG7 708 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 GDF3Q9NR23 364 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 CUTCQ9NTM9 273 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 AGPAT5Q9NUQ2 364 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.91□□□□□ -1.78
NUP88-213ENST00000576862 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.91□□□□□ -1.78
NUP88-213ENST00000576862 SPG21Q9NZD8 308 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 RCOR3Q9P2K3 495 aaPredicted RBP3.91□□□□□ -1.78
NUP88-213ENST00000576862 ANKMY1Q9P2S6 941 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 ATP6V1HQ9UI12 483 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 C15orf41Q9Y2V0 281 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 COL1A1P02452 1464 aaPredicted RBP3.91□□□□□ -1.78
NUP88-213ENST00000576862 ITGB4P16144 1822 aa3.91□□□□□ -1.78
NUP88-213ENST00000576862 SMIM30A4D0T7 59 aa3.9□□□□□ -1.79
NUP88-213ENST00000576862 OR6C74A6NCV1 312 aa3.9□□□□□ -1.79
NUP88-213ENST00000576862 FAM47DPA6NHR8 397 aa3.9□□□□□ -1.79
NUP88-213ENST00000576862 RNF212BA8MTL3 300 aa3.9□□□□□ -1.79
NUP88-213ENST00000576862 ZNF487B1APH4 448 aa3.9□□□□□ -1.79
NUP88-213ENST00000576862 KLLNB2CW77 178 aa3.9□□□□□ -1.79
NUP88-213ENST00000576862 H0YHG0 523 aa3.9□□□□□ -1.79
NUP88-213ENST00000576862 PSMD3O43242 534 aa3.9□□□□□ -1.79
NUP88-213ENST00000576862 GPAA1O43292 621 aa3.9□□□□□ -1.79
NUP88-213ENST00000576862 AKR7A3O95154 331 aa3.9□□□□□ -1.79
NUP88-213ENST00000576862 TXNDC12O95881 172 aa3.9□□□□□ -1.79
NUP88-213ENST00000576862 OTCP00480 354 aa3.9□□□□□ -1.79
NUP88-213ENST00000576862 GIG44P09565 113 aaPredicted RBP3.9□□□□□ -1.79
NUP88-213ENST00000576862 SBK2P0C263 348 aa3.9□□□□□ -1.79
NUP88-213ENST00000576862 THRBP10828 461 aa3.9□□□□□ -1.79
NUP88-213ENST00000576862 ETS1P14921 441 aa3.9□□□□□ -1.79
NUP88-213ENST00000576862 AHCYP23526 432 aa3.9□□□□□ -1.79
NUP88-213ENST00000576862 PTBP1P26599 531 aaKnown RBP eCLIP3.9□□□□□ -1.79
NUP88-213ENST00000576862 RPA1P27694 616 aa3.9□□□□□ -1.79
NUP88-213ENST00000576862 PTPN4P29074 926 aa3.9□□□□□ -1.79
NUP88-213ENST00000576862 GYG1P46976 350 aa3.9□□□□□ -1.79
NUP88-213ENST00000576862 MRPS15P82914 257 aaKnown RBP3.9□□□□□ -1.79
NUP88-213ENST00000576862 SPIBQ01892 262 aa3.9□□□□□ -1.79
NUP88-213ENST00000576862 NAAAQ02083 359 aa3.9□□□□□ -1.79
NUP88-213ENST00000576862 EMC2Q15006 297 aa3.9□□□□□ -1.79
NUP88-213ENST00000576862 ABRAXAS2Q15018 415 aa3.9□□□□□ -1.79
NUP88-213ENST00000576862 STX1AQ16623 288 aa3.9□□□□□ -1.79
NUP88-213ENST00000576862 ANKRD55Q3KP44 614 aa3.9□□□□□ -1.79
NUP88-213ENST00000576862 SLC22A6Q4U2R8 563 aa3.9□□□□□ -1.79
NUP88-213ENST00000576862 EPC2Q52LR7 807 aa3.9□□□□□ -1.79
NUP88-213ENST00000576862 HERC4Q5GLZ8 1057 aaPredicted RBP3.9□□□□□ -1.79
NUP88-213ENST00000576862 ISLR2Q6UXK2 745 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms