RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 UGT2B11O75310 529 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 ITGA10O75578 1167 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 FBXO45P0C2W1 286 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 UBTFL6P0CB48 400 aaPredicted RBP9.46□□□□□ -0.9
USP3-219ENST00000561326 GKN3PP0CG01 181 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 UBL4AP11441 157 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 SLC6A8P48029 635 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 SSR4P51571 173 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 ZNF136P52737 540 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 C17orf67Q0P5P2 114 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 FOXD4Q12950 439 aaPredicted RBP9.46□□□□□ -0.9
USP3-219ENST00000561326 CHAF1BQ13112 559 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 MED21Q13503 144 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 OR1Q1Q15612 314 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 WLSQ5T9L3 541 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 ZNF613Q6PF04 617 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 TBPL2Q6SJ96 375 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 MRGPREQ86SM8 312 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 COMTD1Q86VU5 262 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 OR10G2Q8NGC3 310 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 OR4C15Q8NGM1 316 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 ADAMTS16Q8TE57 1224 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 ASB15Q8WXK1 588 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 SLC41A3Q96GZ6 507 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 PSD2Q9BQI7 771 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 WFDC6Q9BQY6 131 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 LAT2Q9GZY6 243 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 GABARAPL1Q9H0R8 117 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 CDCP1Q9H5V8 836 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 SMURF2Q9HAU4 748 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 KRCC1Q9NPI7 259 aaPredicted RBP9.46□□□□□ -0.9
USP3-219ENST00000561326 ATP13A2Q9NQ11 1180 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 WDR70Q9NW82 654 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 DNAJB12Q9NXW2 375 aaKnown RBP9.46□□□□□ -0.9
USP3-219ENST00000561326 VNN3Q9NY84 501 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 TEKT2Q9UIF3 430 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 MGAT4BQ9UQ53 548 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 MAGED1Q9Y5V3 778 aaPredicted RBP9.46□□□□□ -0.9
USP3-219ENST00000561326 C7orf72A4D263 438 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 TRABD2BA6NFA1 517 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 H0YAE9 185 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 DENRO43583 198 aaKnown RBP9.45□□□□□ -0.9
USP3-219ENST00000561326 OR10H3O60404 316 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 TPST2O60704 377 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 NADKO95544 446 aaPredicted RBP9.45□□□□□ -0.9
USP3-219ENST00000561326 ANGPTL1O95841 491 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 FREM3P0C091 2139 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 ITGAMP11215 1152 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 PRG2P13727 222 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 IGFBP5P24593 272 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 EVI2BP34910 448 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 ACAA2P42765 397 aaKnown RBP9.45□□□□□ -0.9
USP3-219ENST00000561326 LIMS1P48059 325 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 RRADP55042 308 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 FBXW4P57775 412 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 PPP2R2BQ00005 443 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 HOXC5Q00444 222 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 AIMP2Q13155 320 aaKnown RBP9.45□□□□□ -0.9
USP3-219ENST00000561326 CAMK2BQ13554 666 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 NPTX1Q15818 432 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 NTRK2Q16620 822 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 CMPK2Q5EBM0 449 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 TTC23Q5W5X9 447 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 KDM4DQ6B0I6 523 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 H3F3CQ6NXT2 135 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 ULK3Q6PHR2 472 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 ZNF730Q6ZMV8 503 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 C16orf47Q6ZP98 133 aaPredicted RBP9.45□□□□□ -0.9
USP3-219ENST00000561326 CDK20Q8IZL9 346 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 RNF113BQ8IZP6 322 aaKnown RBP9.45□□□□□ -0.9
USP3-219ENST00000561326 HS3ST5Q8IZT8 346 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 ARMC10Q8N2F6 343 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 TMEM156Q8N614 296 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 TMCO5AQ8N6Q1 288 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 LSMEM1Q8N8F7 131 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 POGLUT1Q8NBL1 392 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 CLEC1AQ8NC01 280 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 ZNF555Q8NEP9 628 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 OR5M3Q8NGP4 307 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 RNF217Q8TC41 542 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 DNAJA4Q8WW22 397 aaPredicted RBP9.45□□□□□ -0.9
USP3-219ENST00000561326 THAP4Q8WY91 577 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 SPACA9Q96E40 222 aaPredicted RBP9.45□□□□□ -0.9
USP3-219ENST00000561326 NAF1Q96HR8 494 aaKnown RBP9.45□□□□□ -0.9
USP3-219ENST00000561326 HS6ST2Q96MM7 605 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 RASL10BQ96S79 203 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 SECISBP2Q96T21 854 aaKnown RBP9.45□□□□□ -0.9
USP3-219ENST00000561326 FEVQ99581 238 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 KRT84Q9NSB2 600 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 ABI3Q9P2A4 366 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 IL17BQ9UHF5 180 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 POFUT2Q9Y2G5 429 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 LRCH1Q9Y2L9 728 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 AP4B1Q9Y6B7 739 aa9.45□□□□□ -0.9
USP3-219ENST00000561326 TRBV4-1A0A0J9YWV2 114 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 SH3PXD2BA1X283 911 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 CDK2AP1O14519 115 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 HCRTR2O43614 444 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 SEMA7AO75326 666 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 SNAP29O95721 258 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms