RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 ANKRD33BA6NCL7 494 aa9.77□□□□□ -0.85
TPM1-210ENST00000558264 UNC119BA6NIH7 251 aa9.77□□□□□ -0.85
TPM1-210ENST00000558264 LRRN3E7EW58 273 aa9.77□□□□□ -0.85
TPM1-210ENST00000558264 RGS5O15539 181 aa9.77□□□□□ -0.85
TPM1-210ENST00000558264 AQP9O43315 295 aa9.77□□□□□ -0.85
TPM1-210ENST00000558264 HRO43593 1189 aa9.77□□□□□ -0.85
TPM1-210ENST00000558264 GMFGO60234 142 aa9.77□□□□□ -0.85
TPM1-210ENST00000558264 NKX2-2O95096 273 aa9.77□□□□□ -0.85
TPM1-210ENST00000558264 TSPAN19P0C672 248 aa9.77□□□□□ -0.85
TPM1-210ENST00000558264 PSMA1P25786 263 aaKnown RBP9.77□□□□□ -0.85
TPM1-210ENST00000558264 BMP8BP34820 402 aa9.77□□□□□ -0.85
TPM1-210ENST00000558264 MAP3K8P41279 467 aa9.77□□□□□ -0.85
TPM1-210ENST00000558264 SLC16A1P53985 500 aa9.77□□□□□ -0.85
TPM1-210ENST00000558264 FOXL2P58012 376 aa9.77□□□□□ -0.85
TPM1-210ENST00000558264 OR1D5P58170 312 aa9.77□□□□□ -0.85
TPM1-210ENST00000558264 COL13A1Q5TAT6 717 aaPredicted RBP9.77□□□□□ -0.85
TPM1-210ENST00000558264 C19orf48Q6RUI8 117 aa9.77□□□□□ -0.85
TPM1-210ENST00000558264 ZNF321PQ8N8H1 164 aa9.77□□□□□ -0.85
TPM1-210ENST00000558264 Q8N9G6 341 aaPredicted RBP9.77□□□□□ -0.85
TPM1-210ENST00000558264 RCBTB1Q8NDN9 531 aa9.77□□□□□ -0.85
TPM1-210ENST00000558264 OR2T33Q8NG76 320 aa9.77□□□□□ -0.85
TPM1-210ENST00000558264 OR51G2Q8NGK0 314 aa9.77□□□□□ -0.85
TPM1-210ENST00000558264 DGAT2Q96PD7 388 aa9.77□□□□□ -0.85
TPM1-210ENST00000558264 NUAK2Q9H093 628 aa9.77□□□□□ -0.85
TPM1-210ENST00000558264 LRRN3Q9H3W5 708 aa9.77□□□□□ -0.85
TPM1-210ENST00000558264 ANKRD19PQ9H560 264 aa9.77□□□□□ -0.85
TPM1-210ENST00000558264 MARCH7Q9H992 704 aa9.77□□□□□ -0.85
TPM1-210ENST00000558264 MEPEQ9NQ76 525 aaPredicted RBP9.77□□□□□ -0.85
TPM1-210ENST00000558264 DHCR7Q9UBM7 475 aaKnown RBP9.77□□□□□ -0.85
TPM1-210ENST00000558264 SATB2Q9UPW6 733 aa9.77□□□□□ -0.85
TPM1-210ENST00000558264 CDH10Q9Y6N8 788 aa9.77□□□□□ -0.85
TPM1-210ENST00000558264 CABIN1Q9Y6J0 2220 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 FRYLO94915 3013 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 FUOMA2VDF0 154 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 CHURC1-FNTBB4DL54 471 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 LYPD3O95274 346 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 NGFRP08138 427 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 LIMS3P0CW19 117 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 LIMS4P0CW20 117 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 CLUP10909 449 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 S100A5P33763 92 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 FASLGP48023 281 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 FNTBP49356 437 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 CD300CQ08708 224 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 ZNHIT3Q15649 155 aaPredicted RBP9.76□□□□□ -0.85
TPM1-210ENST00000558264 TIMM50Q3ZCQ8 353 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 MINDY4Q4G0A6 757 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 GXYLT1Q4G148 440 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 KLHL12Q53G59 568 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 TTLL10Q6ZVT0 673 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 SLC22A16Q86VW1 577 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 GHDCQ8N2G8 530 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 PARP16Q8N5Y8 322 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 SIRT6Q8N6T7 355 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 CYB561A3Q8NBI2 242 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 OR51Q1Q8NH59 317 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 EFHD2Q96C19 240 aaPredicted RBP9.76□□□□□ -0.85
TPM1-210ENST00000558264 BPIFA2Q96DR5 249 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 TCTN2Q96GX1 697 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 DCLRE1CQ96SD1 692 aaKnown RBP9.76□□□□□ -0.85
TPM1-210ENST00000558264 NELL2Q99435 816 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 CHCHD3Q9NX63 227 aaKnown RBP9.76□□□□□ -0.85
TPM1-210ENST00000558264 ZNF223Q9UK11 482 aaPredicted RBP9.76□□□□□ -0.85
TPM1-210ENST00000558264 B3GNT3Q9Y2A9 372 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 OR10H1Q9Y4A9 318 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 CLDN16Q9Y5I7 305 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 DMDP11532 3685 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 SEC16AO15027 2179 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 A0A1B0GWA3 101 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 KDM4EB2RXH2 506 aaPredicted RBP9.76□□□□□ -0.85
TPM1-210ENST00000558264 MRPL3P09001 348 aaKnown RBP9.76□□□□□ -0.85
TPM1-210ENST00000558264 SLC9A3P48764 834 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 CAV3P56539 151 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 WNT4P56705 351 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 MLLT11Q13015 90 aaPredicted RBP9.76□□□□□ -0.85
TPM1-210ENST00000558264 KLHL22Q53GT1 634 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 AADACL4Q5VUY2 407 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 DESI1Q6ICB0 168 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 RBM12BQ8IXT5 1001 aaKnown RBP9.76□□□□□ -0.85
TPM1-210ENST00000558264 OR4C3Q8NH37 302 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 C16orf52Q8NHV5 167 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 NR4A3Q92570 626 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 HTRA1Q92743 480 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 C1GALT1C1Q96EU7 318 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 VSTM2LQ96N03 204 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 CD180Q99467 661 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 IFT27Q9BW83 186 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 TTTY10Q9BZA0 68 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 NDUFB11Q9NX14 153 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 FBXL4Q9UKA2 621 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 CBLCQ9ULV8 474 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 CLCA3PQ9Y6N3 262 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 RNF215Q9Y6U7 377 aa9.76□□□□□ -0.85
TPM1-210ENST00000558264 RHPN2P1A8MT19 583 aa9.75□□□□□ -0.85
TPM1-210ENST00000558264 COQ9O75208 318 aa9.75□□□□□ -0.85
TPM1-210ENST00000558264 CDRT1O95170 752 aa9.75□□□□□ -0.85
TPM1-210ENST00000558264 GYPBP06028 91 aa9.75□□□□□ -0.85
TPM1-210ENST00000558264 DCNP07585 359 aaKnown RBP9.75□□□□□ -0.85
TPM1-210ENST00000558264 SOX6P35712 828 aa9.75□□□□□ -0.85
TPM1-210ENST00000558264 RACK1P63244 317 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms