RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 WDR53Q7Z5U6 358 aaPredicted RBP6.5□□□□□ -1.37
SYNE2-216ENST00000555002 HOXD1Q9GZZ0 328 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 SOX17Q9H6I2 414 aaPredicted RBP6.5□□□□□ -1.37
SYNE2-216ENST00000555002 CNIH4Q9P003 139 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 BOKQ9UMX3 212 aaPredicted RBP6.5□□□□□ -1.37
SYNE2-216ENST00000555002 A0A1W2PS29 197 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 OR5K4A6NMS3 321 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 ARHGEF15O94989 841 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 GSRP00390 522 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 TFP02787 698 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 RPL7P18124 248 aaKnown RBP6.5□□□□□ -1.37
SYNE2-216ENST00000555002 SSTR4P31391 388 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 STC1P52823 247 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 BAXQ07812 192 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 ARL6IP1Q15041 203 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 OR4C11Q6IEV9 310 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 ZNF585AQ6P3V2 769 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 SBSNQ6UWP8 590 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 C14orf80Q86SX3 495 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 BAGE3Q86Y29 109 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 BAGE2Q86Y30 109 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 NKX3-1Q99801 234 aaPredicted RBP6.5□□□□□ -1.37
SYNE2-216ENST00000555002 SEMA4CQ9C0C4 833 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 GPR83Q9NYM4 423 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 C5AR2Q9P296 337 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 LIPT1Q9Y234 373 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 ZNF816-ZNF321PA0A0X1KG74 233 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 AGAP14A8MT82 685 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 LGALS8O00214 317 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 PRAMEF11O60813 436 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 RFPL2O75678 378 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 CLDN1O95832 211 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 SNRNP70P08621 437 aaKnown RBP6.5□□□□□ -1.37
SYNE2-216ENST00000555002 HNF1AP20823 631 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 IL1R2P27930 398 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 MBTPS1Q14703 1052 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 SLC9A3R2Q15599 337 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 NCBP2-AS2Q69YL0 99 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 SULF2Q8IWU5 870 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 ZNF321PQ8N8H1 164 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 ZNF461Q8TAF7 563 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 UHRF2Q96PU4 802 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 APOBEC3GQ9HC16 384 aaKnown RBP6.5□□□□□ -1.37
SYNE2-216ENST00000555002 LRIT1Q9P2V4 623 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 CPNE7Q9UBL6 633 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 IER3IP1Q9Y5U9 82 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 SURF4O15260 269 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 PRAMEF2O60811 474 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 APBB3O95704 486 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 RNLSQ5VYX0 342 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 RBMS3Q6XE24 437 aaKnown RBP6.5□□□□□ -1.37
SYNE2-216ENST00000555002 PRRC1Q96M27 445 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 ALG8Q9BVK2 526 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 PLEK2Q9NYT0 353 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 LTN1O94822 1766 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 HEATR5BQ9P2D3 2071 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 UBFD1O14562 309 aaKnown RBP6.5□□□□□ -1.37
SYNE2-216ENST00000555002 OR7A17O14581 309 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 INCA1Q0VD86 236 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 RBM14Q96PK6 669 aaKnown RBP6.5□□□□□ -1.37
SYNE2-216ENST00000555002 LPAR4Q99677 370 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 SACM1LQ9NTJ5 587 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 PREX1Q8TCU6 1659 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 PRAMEF27A3QJZ7 478 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 ZNF728P0DKX0 622 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 APEHP13798 732 aaKnown RBP6.5□□□□□ -1.37
SYNE2-216ENST00000555002 HRH2P25021 359 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 TAS2R30P59541 319 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 CDKN3Q16667 212 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 PRAMEF9Q5VWM5 478 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 ZDHHC16Q969W1 377 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 OR4K3Q96R72 315 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 DOHHQ9BU89 302 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 NMES1Q9C002 83 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 EHFQ9NZC4 300 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 SETBP1Q9Y6X0 1596 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 hCG_1809904A0A1W2PP81 198 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 A0A1W2PPE2 198 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 A0A1W2PR64 198 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 MLF1P58340 268 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 TNK1Q13470 666 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 ATP6AP1Q15904 470 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 CCNJQ5T5M9 372 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 DLK2Q6UY11 383 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 EID2Q8N6I1 236 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 TMEM185AQ8NFB2 350 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 VN1R3Q9BXE9 311 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 DPH1Q9BZG8 443 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 MIA3Q5JRA6 1907 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 PFKMP08237 780 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 C1GALT1C1LP0DN25 315 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 HLA-DMAP28067 261 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 UBE2KP61086 200 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 ABHD18Q0P651 414 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 RABEPKQ7Z6M1 372 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 CYB561A3Q8NBI2 242 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 UPRTQ96BW1 309 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 ZNF689Q96CS4 500 aaPredicted RBP6.5□□□□□ -1.37
SYNE2-216ENST00000555002 NSUN5Q96P11 429 aaKnown RBP6.5□□□□□ -1.37
SYNE2-216ENST00000555002 ADAMTS10Q9H324 1103 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms