RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 COA4Q9NYJ1 87 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 CDH10Q9Y6N8 788 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 TBC1D3DA0A087WVF3 549 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 TBC1D3IA0A087WXS9 549 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 TBC1D3EA0A087X179 549 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 TBC1D3KA0A087X1G2 549 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 TBC1D3FA6NER0 549 aaPredicted RBP8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 POM121BA6NF01 834 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 TTLL8A6PVC2 850 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 TBC1D3LB9A6J9 549 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 SIGLEC6O43699 453 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 CLEC3AO75596 197 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 GADD45GO95257 159 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 GASTP01350 101 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 TBC1D3HP0C7X1 549 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 ANXA8P13928 327 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 RHCEP18577 417 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 TEAD1P28347 426 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 LCN1P31025 176 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 HMGA2P52926 109 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 CLDN2P57739 230 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 KRT33BQ14525 404 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 TSC22D1Q15714 1073 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 RPE65Q16518 533 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 SYPL1Q16563 259 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 PDSS1Q5T2R2 415 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 TBC1D3GQ6DHY5 549 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 TBC1D3CQ6IPX1 549 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 HSDL2Q6YN16 418 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 PTCHD4Q6ZW05 846 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 TBC1D3Q8IZP1 549 aaPredicted RBP8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 OR2L8Q8NGY9 312 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 SFXN2Q96NB2 322 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 ZNF285Q96NJ3 590 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 ZCCHC4Q9H5U6 513 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 BEX1Q9HBH7 125 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 BIN3Q9NQY0 253 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 CLN6Q9NWW5 311 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 KCMF1Q9P0J7 381 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 TINAGQ9UJW2 476 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 PCDHGB7Q9Y5F8 929 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 NINQ8N4C6 2090 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 TRBV4-1A0A0J9YWV2 114 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 A0A1W2PQF6 199 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 C5orf58C9J3I9 102 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 ANHXE9PGG2 379 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 H0Y8X5 98 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 CASKO14936 926 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 PGRMC2O15173 223 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 ATG12O94817 140 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 IFNW1P05000 195 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 SCG5P05408 212 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 OR12D1P0DN82 309 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 GABRB1P18505 474 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 C4BPBP20851 252 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 PXNP49023 591 aaPredicted RBP8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 C1DQ13901 141 aaKnown RBP8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 ZIC1Q15915 447 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 UAP1L1Q3KQV9 507 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 Q3ZCU0 254 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 PAN3Q58A45 887 aaKnown RBP8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 ALKAL2Q6UX46 152 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 GDPGP1Q6ZNW5 385 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 SZRD1Q7Z422 152 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 AQP11Q8NBQ7 271 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 MOSPD2Q8NHP6 518 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 MS4A6EQ96DS6 147 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 LRRC46Q96FV0 321 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 IL4I1Q96RQ9 567 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 ABCG5Q9H222 651 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 OR51J1Q9H342 316 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 NMNAT1Q9HAN9 279 aaPredicted RBP8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 NEUROD4Q9HD90 331 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 MRPS30Q9NP92 439 aaKnown RBP8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 B3GAT2Q9NPZ5 323 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 CTSFQ9UBX1 484 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 CLEC2DQ9UHP7 191 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 POFUT2Q9Y2G5 429 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 DNASE2O00115 360 aaPredicted RBP8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 SEC14L5O43304 696 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 ERI3O43414 337 aaKnown RBP8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 TGM6O95932 706 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 LPLP06858 475 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 AVPR1BP47901 424 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 ATP12AP54707 1039 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 CTBP2P56545 445 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 CDC42P60953 191 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 OPCMLQ14982 345 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 SEC23BQ15437 767 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 PLAG1Q6DJT9 500 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 ZNF770Q6IQ21 691 aaPredicted RBP8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 NUDT18Q6ZVK8 323 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 SLC16A13Q7RTY0 426 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 OVCH2Q7RTZ1 564 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 FAM181AQ8N9Y4 354 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 IL17RCQ8NAC3 791 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 OR2L3Q8NG85 312 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 OR2T4Q8NH00 348 aa8.42□□□□□ -1.06
AL049839.2-201ENST00000553947 KIAA1143Q96AT1 154 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms