RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 PROK1P58294 105 aa7.11□□□□□ -1.27
PRIM1-208ENST00000552590 RNPS1Q15287 305 aaKnown RBP7.11□□□□□ -1.27
PRIM1-208ENST00000552590 EFNB3Q15768 340 aa7.11□□□□□ -1.27
PRIM1-208ENST00000552590 ZNF239Q16600 458 aaKnown RBP7.11□□□□□ -1.27
PRIM1-208ENST00000552590 TMEM44Q2T9K0 475 aa7.11□□□□□ -1.27
PRIM1-208ENST00000552590 ARL13AQ5H913 290 aaPredicted RBP7.11□□□□□ -1.27
PRIM1-208ENST00000552590 KLF17Q5JT82 389 aaPredicted RBP7.11□□□□□ -1.27
PRIM1-208ENST00000552590 PCID2Q5JVF3 399 aa7.11□□□□□ -1.27
PRIM1-208ENST00000552590 ELFN2Q5R3F8 820 aa7.11□□□□□ -1.27
PRIM1-208ENST00000552590 RAD9BQ6WBX8 426 aa7.11□□□□□ -1.27
PRIM1-208ENST00000552590 MEPCEQ7L2J0 689 aaKnown RBP7.11□□□□□ -1.27
PRIM1-208ENST00000552590 GPR180Q86V85 440 aa7.11□□□□□ -1.27
PRIM1-208ENST00000552590 WDR75Q8IWA0 830 aaKnown RBP7.11□□□□□ -1.27
PRIM1-208ENST00000552590 MFSD3Q96ES6 412 aa7.11□□□□□ -1.27
PRIM1-208ENST00000552590 REXO5Q96IC2 774 aaKnown RBP7.11□□□□□ -1.27
PRIM1-208ENST00000552590 NPAS1Q99742 590 aa7.11□□□□□ -1.27
PRIM1-208ENST00000552590 BRINP2Q9C0B6 783 aa7.11□□□□□ -1.27
PRIM1-208ENST00000552590 TPK1Q9H3S4 243 aa7.11□□□□□ -1.27
PRIM1-208ENST00000552590 ZNF665Q9H7R5 613 aa7.11□□□□□ -1.27
PRIM1-208ENST00000552590 PTGES2Q9H7Z7 377 aa7.11□□□□□ -1.27
PRIM1-208ENST00000552590 hCG_2039718K7EN88 272 aa7.1□□□□□ -1.27
PRIM1-208ENST00000552590 HOXA3O43365 443 aaPredicted RBP7.1□□□□□ -1.27
PRIM1-208ENST00000552590 PPIHO43447 177 aaKnown RBP7.1□□□□□ -1.27
PRIM1-208ENST00000552590 KERAO60938 352 aa7.1□□□□□ -1.27
PRIM1-208ENST00000552590 SCELO95171 688 aa7.1□□□□□ -1.27
PRIM1-208ENST00000552590 IGHV3-9P01782 118 aa7.1□□□□□ -1.27
PRIM1-208ENST00000552590 MTHFD2P13995 350 aa7.1□□□□□ -1.27
PRIM1-208ENST00000552590 GSTM2P28161 218 aa7.1□□□□□ -1.27
PRIM1-208ENST00000552590 NTF4P34130 210 aa7.1□□□□□ -1.27
PRIM1-208ENST00000552590 FEN1P39748 380 aaKnown RBP7.1□□□□□ -1.27
PRIM1-208ENST00000552590 SSR2P43308 183 aa7.1□□□□□ -1.27
PRIM1-208ENST00000552590 HNRNPH2P55795 449 aaKnown RBP7.1□□□□□ -1.27
PRIM1-208ENST00000552590 CARD18P57730 90 aa7.1□□□□□ -1.27
PRIM1-208ENST00000552590 LINC00310P59036 64 aa7.1□□□□□ -1.27
PRIM1-208ENST00000552590 EXOSC7Q15024 291 aaKnown RBP7.1□□□□□ -1.27
PRIM1-208ENST00000552590 AP5B1Q2VPB7 878 aa7.1□□□□□ -1.27
PRIM1-208ENST00000552590 GLYR1Q49A26 553 aaPredicted RBP7.1□□□□□ -1.27
PRIM1-208ENST00000552590 ARMCX4Q5H9R4 360 aa7.1□□□□□ -1.27
PRIM1-208ENST00000552590 FOXB2Q5VYV0 432 aa7.1□□□□□ -1.27
PRIM1-208ENST00000552590 FIP1L1Q6UN15 594 aaKnown RBP7.1□□□□□ -1.27
PRIM1-208ENST00000552590 KATNAL2Q8IYT4 538 aa7.1□□□□□ -1.27
PRIM1-208ENST00000552590 SLC16A11Q8NCK7 471 aa7.1□□□□□ -1.27
PRIM1-208ENST00000552590 OR7G1Q8NGA0 311 aa7.1□□□□□ -1.27
PRIM1-208ENST00000552590 LINC01006Q8NI28 216 aa7.1□□□□□ -1.27
PRIM1-208ENST00000552590 RNF138Q8WVD3 245 aa7.1□□□□□ -1.27
PRIM1-208ENST00000552590 SLC35A4Q96G79 324 aa7.1□□□□□ -1.27
PRIM1-208ENST00000552590 DOK1Q99704 481 aa7.1□□□□□ -1.27
PRIM1-208ENST00000552590 MCMBPQ9BTE3 642 aa7.1□□□□□ -1.27
PRIM1-208ENST00000552590 SRXN1Q9BYN0 137 aa7.1□□□□□ -1.27
PRIM1-208ENST00000552590 RTN4RQ9BZR6 473 aa7.1□□□□□ -1.27
PRIM1-208ENST00000552590 CCDC68Q9H2F9 335 aa7.1□□□□□ -1.27
PRIM1-208ENST00000552590 FBXO6Q9NRD1 293 aaPredicted RBP7.1□□□□□ -1.27
PRIM1-208ENST00000552590 BCAP29Q9UHQ4 241 aa7.1□□□□□ -1.27
PRIM1-208ENST00000552590 ZNF490Q9ULM2 529 aaPredicted RBP7.1□□□□□ -1.27
PRIM1-208ENST00000552590 VDAC3Q9Y277 283 aa7.1□□□□□ -1.27
PRIM1-208ENST00000552590 BZW2Q9Y6E2 419 aaKnown RBP7.1□□□□□ -1.27
PRIM1-208ENST00000552590 U3KQK5 164 aa7.1□□□□□ -1.27
PRIM1-208ENST00000552590 UBR4Q5T4S7 5183 aa7.09□□□□□ -1.27
PRIM1-208ENST00000552590 MDFIC2A0A1B0GVS7 189 aa7.09□□□□□ -1.27
PRIM1-208ENST00000552590 PSTPIP1O43586 416 aa7.09□□□□□ -1.27
PRIM1-208ENST00000552590 TSPAN2O60636 221 aa7.09□□□□□ -1.27
PRIM1-208ENST00000552590 FBXO24O75426 580 aa7.09□□□□□ -1.27
PRIM1-208ENST00000552590 PRKD3O94806 890 aa7.09□□□□□ -1.27
PRIM1-208ENST00000552590 SERPING1P05155 500 aa7.09□□□□□ -1.27
PRIM1-208ENST00000552590 ADRA2AP08913 450 aa7.09□□□□□ -1.27
PRIM1-208ENST00000552590 CD22P20273 847 aa7.09□□□□□ -1.27
PRIM1-208ENST00000552590 OGNP20774 298 aaKnown RBP7.09□□□□□ -1.27
PRIM1-208ENST00000552590 NT5EP21589 574 aa7.09□□□□□ -1.27
PRIM1-208ENST00000552590 SLC1A3P43003 542 aa7.09□□□□□ -1.27
PRIM1-208ENST00000552590 SLC1A1P43005 524 aa7.09□□□□□ -1.27
PRIM1-208ENST00000552590 AP1S2P56377 157 aa7.09□□□□□ -1.27
PRIM1-208ENST00000552590 RAB10P61026 200 aa7.09□□□□□ -1.27
PRIM1-208ENST00000552590 SLC25A3Q00325 362 aa7.09□□□□□ -1.27
PRIM1-208ENST00000552590 ESPNLQ6ZVH7 1005 aa7.09□□□□□ -1.27
PRIM1-208ENST00000552590 LARP4Q71RC2 724 aaKnown RBP eCLIP7.09□□□□□ -1.27
PRIM1-208ENST00000552590 KRT78Q8N1N4 520 aa7.09□□□□□ -1.27
PRIM1-208ENST00000552590 MYO1HQ8N1T3 1032 aa7.09□□□□□ -1.27
PRIM1-208ENST00000552590 RIBC1Q8N443 379 aaPredicted RBP7.09□□□□□ -1.27
PRIM1-208ENST00000552590 WDR31Q8NA23 367 aa7.09□□□□□ -1.27
PRIM1-208ENST00000552590 JADE3Q92613 823 aa7.09□□□□□ -1.27
PRIM1-208ENST00000552590 NDNQ99608 321 aa7.09□□□□□ -1.27
PRIM1-208ENST00000552590 B9D2Q9BPU9 175 aa7.09□□□□□ -1.27
PRIM1-208ENST00000552590 SLC30A2Q9BRI3 323 aa7.09□□□□□ -1.27
PRIM1-208ENST00000552590 WNT10AQ9GZT5 417 aa7.09□□□□□ -1.27
PRIM1-208ENST00000552590 GOLPH3Q9H4A6 298 aa7.09□□□□□ -1.27
PRIM1-208ENST00000552590 CXorf36Q9H7Y0 433 aa7.09□□□□□ -1.27
PRIM1-208ENST00000552590 DYNLRB1Q9NP97 96 aa7.09□□□□□ -1.27
PRIM1-208ENST00000552590 ZNF275Q9NSD4 429 aaPredicted RBP7.09□□□□□ -1.27
PRIM1-208ENST00000552590 MS4A12Q9NXJ0 267 aa7.09□□□□□ -1.27
PRIM1-208ENST00000552590 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.09□□□□□ -1.272e-6■□□□□ 10.6
PRIM1-208ENST00000552590 HERC1Q15751 4861 aa7.08□□□□□ -1.28
PRIM1-208ENST00000552590 PRAMEF27A3QJZ7 478 aa7.08□□□□□ -1.28
PRIM1-208ENST00000552590 CTAGE9A4FU28 777 aa7.08□□□□□ -1.28
PRIM1-208ENST00000552590 ERI2A8K979 691 aaKnown RBP7.08□□□□□ -1.28
PRIM1-208ENST00000552590 ETV2O00321 342 aaPredicted RBP7.08□□□□□ -1.28
PRIM1-208ENST00000552590 TO15178 435 aa7.08□□□□□ -1.28
PRIM1-208ENST00000552590 HPXP02790 462 aa7.08□□□□□ -1.28
PRIM1-208ENST00000552590 GNAZP19086 355 aa7.08□□□□□ -1.28
PRIM1-208ENST00000552590 DRD5P21918 477 aa7.08□□□□□ -1.28
PRIM1-208ENST00000552590 GATA3P23771 443 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms